FFCP PHASE1:Hg19::chr5:36877243..36877255,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:36877243..36877255,+
|short_description=p4@NIPBL
|description=CAGE_peak_4_at_NIPBL_5end
|association_with_transcript=351bp_to_ENST00000448238_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25836 | |EntrezGene=25836 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28862 | |HGNC=28862 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=351bp_to_ENST00000448238_5end | |||
|cluster_id=chr5:36877243..36877255,+ | |||
|description=CAGE_peak_4_at_NIPBL_5end | |||
|id=chr5:36877243..36877255,+ | |||
|ontology_enrichment_celltype=CL:0002031!9.27e-18!124;CL:0000738!3.33e-17!140;CL:0002087!1.03e-14!119;CL:0000037!2.37e-14!172;CL:0000566!2.37e-14!172;CL:0002032!2.85e-14!165;CL:0000837!2.85e-14!165;CL:0000839!6.15e-14!70;CL:0000557!6.47e-14!71;CL:0000860!7.07e-14!45;CL:0000766!7.18e-14!76;CL:0000988!1.37e-12!182;CL:0002009!1.66e-12!65;CL:0002057!1.97e-12!42;CL:0002194!1.07e-11!63;CL:0000576!1.07e-11!63;CL:0000040!1.07e-11!63;CL:0000559!1.07e-11!63;CL:0000763!1.09e-10!112;CL:0000049!1.09e-10!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.74e-13;33!CL:0002057;3.74e-13;33!CL:0000473;3.70e-10;39!CL:0000234;3.70e-10;39!CL:0000766;2.63e-09;69!CL:0000576;1.55e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.15e-17,136;CL:0002031,6.69e-16,120;CL:0000766,2.44e-15,72;CL:0000557,2.66e-14,67;CL:0000037,1.49e-13,168;CL:0000860,2.64e-13,42;CL:0002057,2.64e-13,42;CL:0000839,2.70e-13,66;CL:0000988,5.33e-13,177;CL:0002032,5.35e-13,161;CL:0000837,5.35e-13,161;CL:0002087,5.85e-13,115;CL:0000473,2.26e-12,48;CL:0000234,2.26e-12,48;CL:0002009,2.28e-11,61;CL:0002194,1.03e-10,59;CL:0000576,1.03e-10,59;CL:0000040,1.03e-10,59;CL:0000559,1.03e-10,59;CL:0000763,4.57e-10,108;CL:0000049,4.57e-10,108 | |||
|ontology_enrichment_development_v019=CL:0002057;4.15e-11;42 | |||
|ontology_enrichment_disease=DOID:305!5.38e-09!106;DOID:162!9.36e-08!235;DOID:14566!1.21e-07!239;DOID:1749!1.58e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.07e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.66e-10,14;DOID:4362,9.98e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002371!7.39e-13!80;UBERON:0002390!2.08e-11!102;UBERON:0003061!2.08e-11!102;UBERON:0001474!3.65e-11!86;UBERON:0002193!3.20e-09!112;UBERON:0002405!1.75e-08!115;UBERON:0004765!3.39e-08!101;UBERON:0001434!3.39e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.73e-14,76;UBERON:0001474,3.75e-12,82;UBERON:0002390,1.39e-11,98;UBERON:0003061,1.39e-11,98;UBERON:0002405,9.30e-11,93;UBERON:0004765,2.20e-10,90;UBERON:0002193,9.80e-10,108;UBERON:0001434,1.33e-08,100 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0.410623275218653,0.125542639594803,0.382067028739756,0.492603536699674,0.314843125254717,0,0.767658796194425,0.464448369948228,0,0,0,1.70427841276664,0.568676929949686,0.293600439334847,1.66198622559563,1.20326668482085,0.651032612147555,0.447830948479849,0.32389366601898,1.03030227053675,0.581592955118259,1.13362783106643,0.485168122375632,0.232429036905685,5.75635043230556,0.619412741790207,1.1507695692886,0.768482119587302,0.709446689665756,3.44745680736619,2.5819387343353,2.70852973188684,1.12945403725563,1.63743690034707,1.12361742222542,0.918251677112708,0.962787081228281,3.83602275479425,0.329851300186716,1.79517291859469,0.426224750532694,2.90209238628584,3.97169657283798,0,1.7587406567972,1.0429658368404,0.65156653411535,1.21079900526674,4.78760926783834,1.58231193720442,0.211255286311942,0.425208599930087,0,0.673971786878971,0.300353785683013,0.32145117339416,0.570025487482497,0.19891667719909,0.547992461293902,0,0,0,0.426730222566507,0,0,0,1.90810750907073,1.1384259382189,0.587237189370939,2.29363936875137,1.32171328579026,0.560508562981536,0,1.57367816091066,0.393010762749165,0.822405995998037,0.167186495390678,0.32592226663359,0.946895611469467,0,0.557052284425868,0.589211814949674,0,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0.535081656179426,0,0,1.91610246800961,0,0.506039384039006,0,0,0.950452044448374,0.451725357233318,0.895906278080929,0,0.473554504088034,0,3.02410114837099,1.06976078313403,0.289648807765598,0,0,0,0,0,0,0.795285947051099,0,0.283604451492204,0,0.175669571386252,0.458426764241994,0,0,0,0.174129737299267,0,0.953962497221368,0,1.85728750664782,0.198762407366705,0,0.694281003215189,0,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0.24406205754817,0.367663080345869,0,0.357198913136319,0,0.450445921933289,0,0.949265659568129,0.732806975721629,0,3.87780264148325,0,0,0.25326102332916,0.264818361626438,0.286836620748814,0.709336764396714,0,0,0,0.622422070799533,0.538842688278752,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0,0.352303495931295,0.161872944368132,0.280901613404497,0.61246251376468,0.122834317311768,0.206651562351531,0,0,0,0.718618141816238,0.168336113954066,0.500474079487857,0.277064115484183,0,0,0,0.113432183160021,0.358779271377724,0.213557388818567,0.423863802319124,0.300091096084402,0.309157587715317,0,0.18611685633159,0.843881661206331,0.194874010322397,1.26216887122057,0,0.484938170456436,1.42003837006646,0.604512589365842,0,0.386521706326594,1.36373060295417,0.573609190778008,0.365921118388786,0.397589304964456,0.69716365721711,0.207322110030741,0,0,0,0,0,0,0,0.236613600079688,1.01150814046861,0.964044119533928,0.882351781859152,0.217879444092406,0.474541238222193,0.539325232640658,0.784885860501384,0.38474715694639,0,0,0,0,0,1.96565443335525,0,0,0.491953754172454,0,0.219500570817251,0,0,0.277765335475589,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0.790204397959275,0,0,0.468008530278475,0.148631162288728,0,0.503946384596579,0.141775097242386,0.806026704325635,1.16253575405585,0.383382679165211,13.7945706610864,0.528290604079356,1.03664057770386,1.15295962733569,1.38866676769018,0.380987365753014,0,0,0,0,0,0.285826432630578,0.336393253036082,0,0.22001485746285,0.129271715757778,3.57656445851882,0,0.26593811658487,0,0,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,2.10833939483032,0,0,0,0.144781306667579,0,0,0.896681151948218,1.97030760201927,1.07813787429759,1.02674429023799,0.508189248444927,0,0,0.167516265334349,0,1.49801404789436,0,2.07207756718018,0.24538298343828,0,0,0,0.356857977594324,0.157702415033935,0.234282829985426,0,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0,0,0.413536052245775,0.215714200818617,1.28073069364133,1.81876542867756,0,0,0.248107807818777,0.460385919864187,0,0.384417447767103,0,0.160853921143607,0,0.308419387605311,0,0.410635780069046,0,0.348631135379878,0.362578348774867,0.200506470303285,0.184161977871793,0.574072240823034,0,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0.877039506583738,0.261435451024901,0.256450125116389,0,0,0.412164046590889,0.183138929636687,0.082509499920588,0,0,0,0.096670718292122,0.308097234229289,0.15350367472613,0.413509717453592,0.214840489736547,0,0.0852266274161009,0.178064071293475,0.495854746082934,0.576570202095319,1.91419068741876,0.4046311234222,0.929691098594572,0.31481234683064,0,0.308033580176089,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0.539617372749944,0,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0,0.141405431953713,0,0.551365343546124,0.66343897524122,0,0,0,0,0.6196469961995,0,0.143411352204052,0,0,0,0,0,0,0,0.673554789078584,0,0,1.22386941009813,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0.640944426764839,0,0.735120647943095,0,0.28853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|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0.410623275218653,0.125542639594803,0.382067028739756,0.492603536699674,0.314843125254717,0,0.767658796194425,0.464448369948228,0,0,0,1.70427841276664,0.568676929949686,0.293600439334847,1.66198622559563,1.20326668482085,0.651032612147555,0.447830948479849,0.32389366601898,1.03030227053675,0.581592955118259,1.13362783106643,0.485168122375632,0.232429036905685,5.75635043230556,0.619412741790207,1.1507695692886,0.768482119587302,0.709446689665756,3.44745680736619,2.5819387343353,2.70852973188684,1.12945403725563,1.63743690034707,1.12361742222542,0.918251677112708,0.962787081228281,3.83602275479425,0.329851300186716,1.79517291859469,0.426224750532694,2.90209238628584,3.97169657283798,0,1.7587406567972,1.0429658368404,0.65156653411535,1.21079900526674,4.78760926783834,1.58231193720442,0.211255286311942,0.425208599930087,0,0.673971786878971,0.300353785683013,0.32145117339416,0.570025487482497,0.19891667719909,0.547992461293902,0,0,0,0.426730222566507,0,0,0,1.90810750907073,1.1384259382189,0.587237189370939,2.29363936875137,1.32171328579026,0.560508562981536,0,1.57367816091066,0.393010762749165,0.822405995998037,0.167186495390678,0.32592226663359,0.946895611469467,0,0.557052284425868,0.589211814949674,0,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0.535081656179426,0,0,1.91610246800961,0,0.506039384039006,0,0,0.950452044448374,0.451725357233318,0.895906278080929,0,0.473554504088034,0,3.02410114837099,1.06976078313403,0.289648807765598,0,0,0,0,0,0,0.795285947051099,0,0.283604451492204,0,0.175669571386252,0.458426764241994,0,0,0,0.174129737299267,0,0.953962497221368,0,1.85728750664782,0.198762407366705,0,0.694281003215189,0,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0.24406205754817,0.367663080345869,0,0.357198913136319,0,0.450445921933289,0,0.949265659568129,0.732806975721629,0,3.87780264148325,0,0,0.25326102332916,0.264818361626438,0.286836620748814,0.709336764396714,0,0,0,0.622422070799533,0.538842688278752,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0,0.352303495931295,0.161872944368132,0.280901613404497,0.61246251376468,0.122834317311768,0.206651562351531,0,0,0,0.718618141816238,0.168336113954066,0.500474079487857,0.277064115484183,0,0,0,0.113432183160021,0.358779271377724,0.213557388818567,0.423863802319124,0.300091096084402,0.309157587715317,0,0.18611685633159,0.843881661206331,0.194874010322397,1.26216887122057,0,0.484938170456436,1.42003837006646,0.604512589365842,0,0.386521706326594,1.36373060295417,0.573609190778008,0.365921118388786,0.397589304964456,0.69716365721711,0.207322110030741,0,0,0,0,0,0,0,0.236613600079688,1.01150814046861,0.964044119533928,0.882351781859152,0.217879444092406,0.474541238222193,0.539325232640658,0.784885860501384,0.38474715694639,0,0,0,0,0,1.96565443335525,0,0,0.491953754172454,0,0.219500570817251,0,0,0.277765335475589,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0.790204397959275,0,0,0.468008530278475,0.148631162288728,0,0.503946384596579,0.141775097242386,0.806026704325635,1.16253575405585,0.383382679165211,13.7945706610864,0.528290604079356,1.03664057770386,1.15295962733569,1.38866676769018,0.380987365753014,0,0,0,0,0,0.285826432630578,0.336393253036082,0,0.22001485746285,0.129271715757778,3.57656445851882,0,0.26593811658487,0,0,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,2.10833939483032,0,0,0,0.144781306667579,0,0,0.896681151948218,1.97030760201927,1.07813787429759,1.02674429023799,0.508189248444927,0,0,0.167516265334349,0,1.49801404789436,0,2.07207756718018,0.24538298343828,0,0,0,0.356857977594324,0.157702415033935,0.234282829985426,0,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0,0,0.413536052245775,0.215714200818617,1.28073069364133,1.81876542867756,0,0,0.248107807818777,0.460385919864187,0,0.384417447767103,0,0.160853921143607,0,0.308419387605311,0,0.410635780069046,0,0.348631135379878,0.362578348774867,0.200506470303285,0.184161977871793,0.574072240823034,0,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0.877039506583738,0.261435451024901,0.256450125116389,0,0,0.412164046590889,0.183138929636687,0.082509499920588,0,0,0,0.096670718292122,0.308097234229289,0.15350367472613,0.413509717453592,0.214840489736547,0,0.0852266274161009,0.178064071293475,0.495854746082934,0.576570202095319,1.91419068741876,0.4046311234222,0.929691098594572,0.31481234683064,0,0.308033580176089,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0.539617372749944,0,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0,0.141405431953713,0,0.551365343546124,0.66343897524122,0,0,0,0,0.6196469961995,0,0.143411352204052,0,0,0,0,0,0,0,0.673554789078584,0,0,1.22386941009813,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0.640944426764839,0,0.735120647943095,0,0.28853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| ||
|short_description=p4@NIPBL | |||
}} | }} |
Latest revision as of 19:47, 17 September 2015
Short description: | p4@NIPBL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NIPBL_5end |
Coexpression cluster: | NA |
Association with transcript: | 351bp_to_ENST00000448238_5end |
EntrezGene: | NIPBL |
HGNC: | 28862 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.15e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 6.69e-16 | 120 |
myeloid leukocyte | 2.44e-15 | 72 |
granulocyte monocyte progenitor cell | 2.66e-14 | 67 |
hematopoietic stem cell | 1.49e-13 | 168 |
classical monocyte | 2.64e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.64e-13 | 42 |
myeloid lineage restricted progenitor cell | 2.70e-13 | 66 |
hematopoietic cell | 5.33e-13 | 177 |
hematopoietic oligopotent progenitor cell | 5.35e-13 | 161 |
hematopoietic multipotent progenitor cell | 5.35e-13 | 161 |
nongranular leukocyte | 5.85e-13 | 115 |
defensive cell | 2.26e-12 | 48 |
phagocyte | 2.26e-12 | 48 |
macrophage dendritic cell progenitor | 2.28e-11 | 61 |
monopoietic cell | 1.03e-10 | 59 |
monocyte | 1.03e-10 | 59 |
monoblast | 1.03e-10 | 59 |
promonocyte | 1.03e-10 | 59 |
myeloid cell | 4.57e-10 | 108 |
common myeloid progenitor | 4.57e-10 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.73e-14 | 76 |
bone element | 3.75e-12 | 82 |
hematopoietic system | 1.39e-11 | 98 |
blood island | 1.39e-11 | 98 |
immune system | 9.30e-11 | 93 |
skeletal element | 2.20e-10 | 90 |
hemolymphoid system | 9.80e-10 | 108 |
skeletal system | 1.33e-08 | 100 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.66e-10 | 14 |
cervical cancer | 9.98e-07 | 5 |