FFCP PHASE1:Hg19::chr5:56247935..56247959,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:56247935..56247959,-
|short_description=p1@MIER3
|description=CAGE_peak_1_at_MIER3_5end
|association_with_transcript=0bp_to_ENST00000381199,ENST00000381213...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=166968 | |EntrezGene=166968 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26678 | |HGNC=26678 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z3K6 | |UniProt=Q7Z3K6 | ||
|association_with_transcript=0bp_to_ENST00000381199,ENST00000381213,ENST00000381226,ENST00000452157,ENST00000480115,NM_152622,uc003jra.1,uc003jrb.1,uc003jrc.1,uc003jrd.1_5end | |||
|cluster_id=chr5:56247935..56247959,- | |||
|description=CAGE_peak_1_at_MIER3_5end | |||
|id=chr5:56247935..56247959,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.52e-13!94;UBERON:0001016!4.52e-13!94;UBERON:0001017!5.93e-13!82;UBERON:0005743!4.36e-12!86;UBERON:0007023!6.79e-12!115;UBERON:0001049!6.55e-11!57;UBERON:0005068!6.55e-11!57;UBERON:0006241!6.55e-11!57;UBERON:0007135!6.55e-11!57;UBERON:0003080!4.90e-10!42;UBERON:0000955!6.31e-10!69;UBERON:0006238!6.31e-10!69;UBERON:0002780!1.23e-09!41;UBERON:0001890!1.23e-09!41;UBERON:0006240!1.23e-09!41;UBERON:0002616!4.97e-09!59;UBERON:0001893!5.31e-07!34;UBERON:0002791!9.77e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.15e-07;41!UBERON:0001890;3.15e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.61e-13,89;UBERON:0001017,1.50e-12,81;UBERON:0007023,6.15e-12,114;UBERON:0001049,1.68e-10,56;UBERON:0005068,1.68e-10,56;UBERON:0006241,1.68e-10,56;UBERON:0007135,1.68e-10,56;UBERON:0000073,8.89e-10,53;UBERON:0002616,8.89e-10,53;UBERON:0002780,1.22e-09,41;UBERON:0001890,1.22e-09,41;UBERON:0003080,1.22e-09,41;UBERON:0006240,1.22e-09,41;UBERON:0000955,1.51e-09,68;UBERON:0006238,1.51e-09,68;UBERON:0011216,4.07e-08,223;UBERON:0001893,5.29e-07,34 | |||
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| ||
|short_description=p1@MIER3 | |||
}} | }} |
Latest revision as of 05:42, 18 September 2015
Short description: | p1@MIER3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIER3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000381199, ENST00000381213, ENST00000381226, ENST00000452157, ENST00000480115, NM_152622, uc003jra.1, uc003jrb.1, uc003jrc.1, uc003jrd.1_5end |
EntrezGene: | MIER3 |
HGNC: | 26678 |
UniProt: | Q7Z3K6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.61e-13 | 89 |
central nervous system | 1.50e-12 | 81 |
adult organism | 6.15e-12 | 114 |
neural tube | 1.68e-10 | 56 |
neural rod | 1.68e-10 | 56 |
future spinal cord | 1.68e-10 | 56 |
neural keel | 1.68e-10 | 56 |
regional part of nervous system | 8.89e-10 | 53 |
regional part of brain | 8.89e-10 | 53 |
regional part of forebrain | 1.22e-09 | 41 |
forebrain | 1.22e-09 | 41 |
anterior neural tube | 1.22e-09 | 41 |
future forebrain | 1.22e-09 | 41 |
brain | 1.51e-09 | 68 |
future brain | 1.51e-09 | 68 |
organ system subdivision | 4.07e-08 | 223 |
telencephalon | 5.29e-07 | 34 |