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<html>
<html>
<script type="text/javascript" src="/resource_browser/rb_js/datatables/media/js/jquery.dataTables.min.js"></script>
<script type="text/javascript" language="javascript" src="/resource_browser/rb_js/datatables/media/js/jquery.dataTables.min.js"></script>
<script type="text/javascript" src="/resource_browser/rb_js/datatables/extras/TableTools/media/js/TableTools.min.js"></script>
<script type="text/javascript" language="javascript" src="/resource_browser/rb_js/datatables/extras/TableTools/media/js/TableTools.min.js"></script>
<script type="text/javascript" src="/resource_browser/rb_js/datatables/media/js/datatables.sortdefs.js"></script>
<style type="text/css" title="currentStyle">
<style type="text/css" title="currentStyle">
@import "/resource_browser/rb_js/datatables/media/css/jquery.dataTables.css";
@import "/resource_browser/rb_js/datatables/media/css/jquery.dataTables.css";
@import "/resource_browser/rb_js/datatables/extras/TableTools/media/css/TableTools.css";
@import "/resource_browser/rb_js/datatables/extras/TableTools/media/css/TableTools.css";
</style>
</style>
<script type="text/javascript">
                      <script>


$(document).ready(function() {
$(document).ready(function() {
     var oTable =  $('.doid_list').dataTable({
     var oTable =  $('.ff_sample_list').dataTable({
"iDisplayLength": 25,
 
"aLengthMenu": [[25, 100, 500, -1], [25, 100, 500, "All"]],
"aoColumnDefs": [ { "sType": "num-html", "aTargets": [0] }, {"fnCreatedCell": function(nTd, sData, oData, iRow, iCol) {$(nTd).html( '<img width=100 height=100 src="http://lifesciencedb.jp/bp3d/icon.cgi?i=' + oData[2] + '&p=front&v=3%2e0&t=conventional&c=1&m=bp3d&s=S">')}, "aTargets": [2]}]
});
});


var oTableTools = new TableTools( oTable, {"sSwfPath": "/resource_browser/rb_js/datatables/extras/TableTools/media/swf/copy_csv_xls_pdf.swf", "aButtons": [ {"sExtends": "copy", "mColumns": "visible"}, {"sExtends": "csv", "mColumns": "visible"}, {"sExtends": "pdf", "mColumns": "visible"} ]});
});
 
$('#export_tool').before( oTableTools.dom.container );
 
 
} );
</script>
</script>
<span id="export_tool"></span>
</html>
</html>


{{#ask:[[Category:Uber Anatomy Ontology]]|mainlabel=ID|?Name|?Anatomical img id|format=ttable|class=doid_list|limit=1500|searchlabel=}}
{{#ask:[[Concept:FF_samples_withname]]|[[Sample_species::Human (Homo sapiens)]]|mainlabel=FF ontology id|?Name|?Sample_category|?datafreeze_phase
 
|format=ttable|class=ff_sample_list|limit=20|searchlabel=}}
<!--
 
<img src="http://lifesciencedb.jp/bp3d/icon.cgi?i=FMA7152&p=front&v=3%2e0&t=conventional&c=1&m=bp3d&s=L">
 
<table class="doid_list"><html><thead></html>
<tr><th>id</th><th>name</th><th>anatomical image</th><tr>
<html></thead><tbody></html>
{{#ask:[[Category:Uber Anatomy Ontology]]|link=none|?Name|?Anatomical img id|format=template|template=uberon_list_row|limit=1500|searchlabel=}}
<html></tbody></html>
</table>
 
$(document).ready(function() {
    var oTable =  $('.doid_list').dataTable({
"iDisplayLength": 25,
"aLengthMenu": [[25, 100, 500, -1], [25, 100, 500, "All"]],
"aoColumnDefs": [ { "sType": "num-html", "aTargets": [0] }, {"fnRender": function ( o, val) {return '<img src="http://lifesciencedb.jp/bp3d/icon.cgi?i=' + o + '&p=front&v=3%2e0&t=conventional&c=1&m=bp3d&s=L">'}, "aTargets": [2]}]
});
 
this is memo
 
motif without matrices
[[Swissregulon:SRY.p1]]
[[Swissregulon:HOX(A,B,D)3.p1]]
 
---------
ids with technical replicates
 
10444-106F3
CNhs11248 & CNhs11185
 
10442-106F1
CNhs11245 & CNhs11183
 
11227-116C3
CNhs10855 & CNhs11062
 
10071-101I8
CNhs11781 & CNhs12997
 
10063-101H9
CNhs11772 & CNhs12996
 
3139-67G5
multiple (internal control)
 
---------
 
 
{{REVISIONTIMESTAMP}}
{{#ifexpr: {{#expr: {{REVISIONTIMESTAMP}}-20120731160000 }} > 0 | yes }}
 
{{CURRENTTIMESTAMP}}
 
 
{{#sparql:select * where { ?x ?y ?z . } LIMIT 100  |endpoint=http://localhost:8080/sparql/}}
 
{{#ask:[[Category:FFCP]][[Coexpression_cluster_id::C297]]|?id|?Short_description|?Phase1_expression|format=template|template=Datatable_sampledata|sep=,|limit=20000}}
 
{{#jstest:
{{#ask:[[Category:FF Ontology]][[Sample_species::Mouse (Mus musculus)]]|?id|?Name|?sample_tissue|?sample_cell_line=|?sample_cell_type|?rna_sample_type|format=template|template=Datatable_sampledata|sep=,|limit=2000}}
}}
 
{{#sparql:
SELECT * WHERE { ?x ?y ?z FILTER regex(?z, "GO")
} LIMIT 10
|endpoint=http://go.bio2rdf.org/sparql/
|footer=NO
}}
 
 
{{#sparql:select * where { ?x ?y ?z . } LIMIT 10  |endpoint=http://localhost:8080/sparql/}}
 
{{#sparql:
PREFIX prop:<http://f5-webapp2/resource_browser/index.php/Special:URIResolver/Property-3A>
PREFIX page:<http://f5-webapp2/resource_browser/index.php/Special:URIResolver/>
SELECT ?x,?y WHERE {
?x
prop:Sample_species
?y FILTER regex(?y, "OMO", "i" )
} LIMIT 100
|endpoint=http://localhost:8080/sparql/
|headers=Page,Id
|footer=NO
}}
 
-->

Latest revision as of 18:50, 20 February 2014

FF ontology idNameSample categoryDatafreeze phase
10000-101A1Clontech Human Universal Reference Total RNA, pool1tissues2
10001-101A3Clontech Mouse Universal Reference Total RNA, pool1tissues2
10002-101A5SABiosciences XpressRef Human Universal Total RNA, pool1tissues2
10003-101A7SABiosciences XpressRef Mouse Universal Total RNA, pool1tissues2
10004-101A9chicken embryo whole body, day10 (HH37)tissues-1
10005-101B1{{{name}}}{{{sample_category}}}-1
10006-101B2Universal RNA - Dog Normal Tissues Biochain, pool1tissues-1
10007-101B4Universal RNA - Human Normal Tissues Biochain, pool1tissues2
10008-101B6Universal RNA - Mouse Normal Tissues Biochain, pool1tissues2
10009-101B8Universal RNA - Rat Normal Tissues Biochain, pool1tissues-1
10010-101C1adipose tissue, adult, pool1tissues2
10011-101C2bladder, adult, pool1tissues2
10012-101C3brain, adult, pool1tissues2
10013-101C4cervix, adult, pool1tissues2
10014-101C5colon, adult, pool1tissues2
10015-101C6esophagus, adult, pool1tissues2
10016-101C7heart, adult, pool1tissues2
10017-101C8kidney, adult, pool1tissues2
10018-101C9liver, adult, pool1tissues2
10019-101D1lung, adult, pool1tissues2
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