NonredundantMotifs:79: Difference between revisions
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;3.478527607361958;1.490797546012269;10.546012269938645;2.484662576687118!2;2.981595092024538;5.079754601226989;5.963190184049076;3.975460122699378!3;0.0;11.926380368098153;3.975460122699378;2.098159509202452!4;0.0;0.9938650306748472;17.00613496932516;0.0!5;0.0;0.0;0.9938650306748472;17.00613496932516!6;0.0;0.9938650306748472;17.00613496932516;0.0!7;0.9938650306748472;0.0;15.901840490797548;1.1042944785276065!8;2.981595092024538;5.963190184049076;7.067484662576688;1.987730061349698!9;10.049079754601227;0.0;4.969325153374236;2.981595092024538!10;0.0;5.963190184049076;10.049079754601227;1.987730061349698!11;7.067484662576688;0.0;8.944785276073613;1.987730061349698!12;2.484662576687118;10.546012269938645;3.478527607361958;1.490797546012269 | |||
|entrez_gene_id=9915 | |entrez_gene_id=9915 | ||
|motif_cluster_2013_march_motif_members= /JASPAR:MA0130.1;ZNF354C | |motif_cluster_2013_march_motif_members= /HOCOMOCO:ARNT2_si /JASPAR:MA0130.1;ZNF354C /SWISSREGULON:KLF12.p2 | ||
|name= | |name=non-redundant79 | ||
|representative_motif_db=HOCOMOCO | |representative_motif_db=HOCOMOCO | ||
|representative_motif_id=ARNT2_si | |representative_motif_id=ARNT2_si | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:21, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant79
- db :HOCOMOCO
- Id :ARNT2_si
- name :
- score :2.0871831162525383
- External refs:
- Internal refs:
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Sub Motif Members
