FFCP PHASE1:Hg19::chr6:12749657..12749699,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:12749657..12749699,+
|short_description=p9@PHACTR1
|description=CAGE_peak_9_at_PHACTR1_5end
|association_with_transcript=0bp_to_ENST00000406205_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221692 | |EntrezGene=221692 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20990 | |HGNC=20990 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000406205_5end | |||
|cluster_id=chr6:12749657..12749699,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_9_at_PHACTR1_5end | |||
|id=chr6:12749657..12749699,+ | |||
|ontology_enrichment_celltype=CL:0000133!2.76e-15!59;CL:0000147!1.80e-12!14;CL:0002319!1.91e-12!25;CL:0000221!9.15e-12!71;CL:0000047!1.40e-10!8;CL:0000333!4.65e-10!41;CL:0000148!1.09e-09!10;CL:0000541!1.09e-09!10;CL:0000540!2.46e-08!6;CL:0000031!2.46e-08!6;CL:0000404!2.46e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002319;6.54e-17;25!CL:0000540;2.07e-12;6!CL:0000404;2.07e-12;6!CL:0002322;1.17e-08;5!CL:0000147;1.26e-08;14!CL:0000148;6.61e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,5.70e-18,59;CL:0002319,8.16e-17,25;CL:0000047,6.07e-16,8;CL:0000221,1.80e-14,72;CL:0000540,2.29e-12,6;CL:0000031,2.29e-12,6;CL:0000404,2.29e-12,6;CL:0000333,1.89e-10,41;CL:0002322,1.50e-08,5;CL:0000147,2.08e-08,14;CL:0000148,7.88e-08,10;CL:0000541,7.88e-08,10 | |||
|ontology_enrichment_development_v019=CL:0000031;2.07e-12;6!CL:0000133;1.03e-10;59!UBERON:0006601;2.54e-10;82!UBERON:0006215;1.30e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.58e-59!94;UBERON:0001016!2.58e-59!94;UBERON:0005743!4.58e-58!86;UBERON:0001017!9.29e-55!82;UBERON:0001049!3.46e-54!57;UBERON:0005068!3.46e-54!57;UBERON:0006241!3.46e-54!57;UBERON:0007135!3.46e-54!57;UBERON:0003075!7.05e-52!86;UBERON:0007284!7.05e-52!86;UBERON:0002346!2.09e-51!90;UBERON:0002616!4.32e-45!59;UBERON:0003056!7.76e-43!61;UBERON:0000955!1.62e-42!69;UBERON:0006238!1.62e-42!69;UBERON:0000924!2.45e-40!173;UBERON:0006601!2.45e-40!173;UBERON:0002780!2.56e-40!41;UBERON:0001890!2.56e-40!41;UBERON:0006240!2.56e-40!41;UBERON:0004121!5.35e-40!169;UBERON:0003080!5.25e-39!42;UBERON:0002020!8.66e-35!34;UBERON:0003528!8.66e-35!34;UBERON:0001893!3.81e-34!34;UBERON:0000033!7.12e-34!123;UBERON:0002791!3.57e-33!33;UBERON:0001869!4.89e-33!32;UBERON:0000153!4.86e-32!129;UBERON:0007811!4.86e-32!129;UBERON:0000956!9.87e-30!25;UBERON:0000203!9.87e-30!25;UBERON:0002619!4.52e-27!22;UBERON:0001950!5.75e-25!20;UBERON:0007023!1.92e-16!115;UBERON:0003076!8.65e-16!15;UBERON:0003057!8.65e-16!15;UBERON:0000475!3.62e-13!365;UBERON:0004733!6.48e-13!12;UBERON:0002028!6.48e-13!12;UBERON:0007277!6.48e-13!12;UBERON:0000064!8.25e-12!219;UBERON:0004732!1.24e-11!13;UBERON:0002680!3.77e-10!9;UBERON:0001895!3.77e-10!9;UBERON:0010092!3.77e-10!9;UBERON:0001871!4.91e-10!7;UBERON:0000483!1.26e-09!309;UBERON:0000119!2.67e-09!312;UBERON:0000025!7.79e-09!194;UBERON:0000200!2.18e-08!6;UBERON:0002021!1.16e-07!5;UBERON:0000970!1.28e-07!20;UBERON:0002037!1.49e-07!6;UBERON:0006215!1.49e-07!6;UBERON:0001894!1.71e-07!7;UBERON:0006222!1.71e-07!7;UBERON:0001872!2.15e-07!5;UBERON:0002104!4.42e-07!21;UBERON:0000922!6.44e-07!612;UBERON:0002308!6.74e-07!9;UBERON:0000125!6.74e-07!9;UBERON:0000062!7.77e-07!511;UBERON:0000019!9.16e-07!19;UBERON:0000047!9.16e-07!19;UBERON:0004088!9.16e-07!19;UBERON:0003072!9.16e-07!19;UBERON:0003071!9.16e-07!19;UBERON:0004128!9.16e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;1.61e-43;25!UBERON:0000203;1.61e-43;25!UBERON:0002619;4.71e-39;22!UBERON:0001869;4.80e-37;32!UBERON:0003528;4.44e-36;34!UBERON:0002020;4.44e-36;34!UBERON:0001950;9.74e-36;20!UBERON:0002791;1.56e-34;32!UBERON:0001893;2.53e-33;34!UBERON:0002780;5.04e-30;41!UBERON:0001890;5.04e-30;41!UBERON:0000073;7.62e-30;53!UBERON:0002616;7.62e-30;53!UBERON:0000955;5.66e-23;68!UBERON:0001017;7.64e-22;75!UBERON:0001016;1.61e-20;83!UBERON:0000200;1.71e-12;6!UBERON:0004733;9.59e-12;12!UBERON:0002028;9.59e-12;12!UBERON:0002021;2.92e-11;5!UBERON:0001872;7.83e-11;5!UBERON:0004732;1.09e-10;13!UBERON:0001871;2.94e-10;6!UBERON:0011216;2.44e-08;132!UBERON:0002680;7.80e-08;9!UBERON:0001895;7.80e-08;9!UBERON:0003296;1.33e-07;4!UBERON:0010133;1.33e-07;4!UBERON:0002298;1.49e-07;6!UBERON:0001870;6.51e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.05e-68,89;UBERON:0001017,1.72e-66,81;UBERON:0001049,9.25e-59,56;UBERON:0005068,9.25e-59,56;UBERON:0006241,9.25e-59,56;UBERON:0007135,9.25e-59,56;UBERON:0000073,4.71e-54,53;UBERON:0002616,4.71e-54,53;UBERON:0003075,2.82e-53,82;UBERON:0007284,2.82e-53,82;UBERON:0002346,4.52e-50,86;UBERON:0000955,5.81e-48,68;UBERON:0006238,5.81e-48,68;UBERON:0010371,3.43e-46,104;UBERON:0000956,2.29e-43,25;UBERON:0000203,2.29e-43,25;UBERON:0003056,6.43e-43,61;UBERON:0002780,6.93e-43,41;UBERON:0001890,6.93e-43,41;UBERON:0003080,6.93e-43,41;UBERON:0006240,6.93e-43,41;UBERON:0004121,7.81e-43,171;UBERON:0000924,7.81e-43,171;UBERON:0006601,7.81e-43,171;UBERON:0003528,3.84e-41,34;UBERON:0002020,3.84e-41,34;UBERON:0001869,8.57e-41,32;UBERON:0002619,4.50e-39,22;UBERON:0001893,6.10e-38,34;UBERON:0002791,8.15e-38,32;UBERON:0001950,1.06e-35,20;UBERON:0010314,5.47e-30,132;UBERON:0011216,8.52e-27,223;UBERON:0007023,1.62e-16,114;UBERON:0003076,2.19e-16,15;UBERON:0003057,2.19e-16,15;UBERON:0000200,1.88e-12,6;UBERON:0004733,5.13e-12,12;UBERON:0002028,5.13e-12,12;UBERON:0007277,5.13e-12,12;UBERON:0002021,2.71e-11,5;UBERON:0000025,4.67e-11,192;UBERON:0004732,6.15e-11,13;UBERON:0001872,7.19e-11,5;UBERON:0001871,3.57e-10,6;UBERON:0000483,2.95e-09,306;UBERON:0000119,5.09e-09,309;UBERON:0002680,6.66e-08,9;UBERON:0001895,6.66e-08,9;UBERON:0010092,6.66e-08,9;UBERON:0002298,9.25e-08,6;UBERON:0003296,1.02e-07,4;UBERON:0010133,1.02e-07,4;UBERON:0000922,3.32e-07,592;UBERON:0004111,5.72e-07,240;UBERON:0001870,6.21e-07,3 | |||
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| ||
|short_description=p9@PHACTR1 | |||
}} | }} |
Latest revision as of 14:37, 24 September 2015
Short description: | p9@PHACTR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PHACTR1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000406205_5end |
EntrezGene: | PHACTR1 |
HGNC: | 20990 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 5.70e-18 | 59 |
neural cell | 8.16e-17 | 25 |
neuronal stem cell | 6.07e-16 | 8 |
ectodermal cell | 1.80e-14 | 72 |
neuron | 2.29e-12 | 6 |
neuroblast | 2.29e-12 | 6 |
electrically signaling cell | 2.29e-12 | 6 |
migratory neural crest cell | 1.89e-10 | 41 |
embryonic stem cell | 1.50e-08 | 5 |
pigment cell | 2.08e-08 | 14 |
melanocyte | 7.88e-08 | 10 |
melanoblast | 7.88e-08 | 10 |