FFCP PHASE1:Hg19::chr6:128813014..128813027,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:128813014..128813027,-
|short_description=p10@PTPRK
|description=CAGE_peak_10_at_PTPRK_5end
|association_with_transcript=-12bp_to_ENST00000495748_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5796 | |EntrezGene=5796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9674 | |HGNC=9674 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000495748_5end | |||
|cluster_id=chr6:128813014..128813027,- | |||
|description=CAGE_peak_10_at_PTPRK_5end | |||
|id=chr6:128813014..128813027,- | |||
|ontology_enrichment_celltype=CL:0002139!2.77e-19!24;CL:0000071!9.32e-15!18;CL:0002546!9.32e-15!18;CL:0000222!1.16e-12!119;CL:0000115!4.45e-12!35;CL:0002078!3.98e-11!44;CL:0000213!8.98e-11!57;CL:0000215!8.98e-11!57;CL:0002543!2.20e-07!6;CL:0002539!4.33e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002138;2.82e-26;6!CL:0002139;6.12e-19;24!CL:0002078;1.58e-10;45!CL:0000115;9.17e-09;36!CL:0000213;6.40e-08;58!CL:0000215;6.40e-08;58!CL:0002548;3.15e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,2.93e-26,6;CL:0002138,2.93e-26,6;CL:0005022,2.93e-26,6;CL:0002139,4.74e-19,24;CL:0002078,1.05e-12,45;CL:0000115,1.80e-12,36;CL:0000213,1.23e-09,58;CL:0000215,1.23e-09,58;CL:0002548,4.30e-07,6 | |||
|ontology_enrichment_development_v019=CL:0005022;2.82e-26;6!UBERON:0008801;8.20e-11;1 | |||
|ontology_enrichment_disease=DOID:2394!7.78e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001473;8.75e-20;8!UBERON:0004536;8.75e-20;8!UBERON:0006558;8.75e-20;8!UBERON:0002465;7.02e-16;10!UBERON:0001831;8.20e-11;1!UBERON:0007195;8.20e-11;1!UBERON:0001567;8.20e-11;1!UBERON:0002119;2.05e-10;4!UBERON:0002405;7.09e-09;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,9.00e-20,8;UBERON:0004536,9.00e-20,8;UBERON:0006558,9.00e-20,8;UBERON:0002465,7.18e-16,10;UBERON:0007195,9.97e-11,1;UBERON:0001831,1.10e-10,1;UBERON:0001567,1.10e-10,1;UBERON:0008801,1.10e-10,1;UBERON:0002119,1.78e-10,4;UBERON:0000055,2.79e-10,68;UBERON:0004535,6.04e-09,109;UBERON:0002049,8.39e-09,78;UBERON:0007798,8.39e-09,78;UBERON:0001009,1.16e-08,112 | |||
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|short_description=p10@PTPRK | |||
}} | }} |
Latest revision as of 15:49, 24 September 2015
Short description: | p10@PTPRK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PTPRK_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000495748_5end |
EntrezGene: | PTPRK |
HGNC: | 9674 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 2.93e-26 | 6 |
endothelial cell of lymphatic vessel | 2.93e-26 | 6 |
vascular lymphangioblast | 2.93e-26 | 6 |
endothelial cell of vascular tree | 4.74e-19 | 24 |
meso-epithelial cell | 1.05e-12 | 45 |
endothelial cell | 1.80e-12 | 36 |
lining cell | 1.23e-09 | 58 |
barrier cell | 1.23e-09 | 58 |
cardiac fibroblast | 4.30e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 9.00e-20 | 8 |
lymph vasculature | 9.00e-20 | 8 |
lymphatic part of lymphoid system | 9.00e-20 | 8 |
lymphoid system | 7.18e-16 | 10 |
stroma of bone marrow | 9.97e-11 | 1 |
parotid gland | 1.10e-10 | 1 |
cheek | 1.10e-10 | 1 |
parotid gland primordium | 1.10e-10 | 1 |
left ovary | 1.78e-10 | 4 |
vessel | 2.79e-10 | 68 |
cardiovascular system | 6.04e-09 | 109 |
vasculature | 8.39e-09 | 78 |
vascular system | 8.39e-09 | 78 |
circulatory system | 1.16e-08 | 112 |