FFCP PHASE1:Hg19::chr6:130686698..130686732,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:130686698..130686732,+
|short_description=p8@TMEM200A
|description=CAGE_peak_8_at_TMEM200A_5end
|association_with_transcript=-146bp_to_ENST00000296978,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=114801 | |EntrezGene=114801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21075 | |HGNC=21075 | ||
|TSSclassifier=strong | |||
|UniProt=Q86VY9 | |UniProt=Q86VY9 | ||
|association_with_transcript=-146bp_to_ENST00000296978,uc003qca.2,uc010kfh.2_5end | |||
|cluster_id=chr6:130686698..130686732,+ | |||
|coexpression_cluster_id=C714 | |||
|description=CAGE_peak_8_at_TMEM200A_5end | |||
|id=chr6:130686698..130686732,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.28e-31!180;CL:0000359!7.71e-18!32;CL:0000192!1.51e-17!42;CL:0000514!1.51e-17!42;CL:0000680!1.71e-17!57;CL:0000056!1.71e-17!57;CL:0000355!1.71e-17!57;CL:0000187!3.81e-17!54;CL:0000393!5.62e-17!60;CL:0000211!5.62e-17!60;CL:0000183!7.35e-15!59;CL:0000057!2.82e-13!75;CL:0002334!2.29e-09!12;CL:0002539!3.58e-08!10;CL:0000222!2.30e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.01e-24;32!CL:0002334;9.88e-16;12!CL:0000192;5.02e-14;43!CL:0002539;2.05e-11;10!CL:0000187;8.28e-09;55!CL:1000306;1.52e-08;4!CL:0002547;1.52e-08;4!CL:0002594;8.75e-08;4!CL:0000393;1.73e-07;61!CL:0000211;1.73e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.82e-26,32;CL:0000192,3.70e-19,43;CL:0000514,3.70e-19,43;CL:0000187,7.79e-16,55;CL:0002334,7.84e-16,12;CL:0000680,1.31e-14,58;CL:0000056,1.31e-14,58;CL:0000355,1.31e-14,58;CL:0000393,1.65e-13,61;CL:0000211,1.65e-13,61;CL:0000723,1.57e-11,433;CL:0002539,2.57e-11,10;CL:0000048,5.40e-11,427;CL:0000034,6.61e-11,441;CL:0000057,2.59e-09,76;CL:1000306,1.31e-08,4;CL:0002547,1.31e-08,4;CL:0002594,9.49e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000514;5.02e-14;43!CL:0000355;3.05e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!3.51e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.75e-12;14!DOID:0060072;7.53e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.20e-13,14;DOID:0060072,8.69e-08,4;DOID:0060084,9.62e-07,3;DOID:127,9.62e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002385!2.21e-17!63;UBERON:0001015!2.21e-17!63;UBERON:0000383!2.21e-17!63;UBERON:0004290!6.31e-17!70;UBERON:0001134!7.37e-17!61;UBERON:0002036!7.37e-17!61;UBERON:0003082!7.37e-17!61;UBERON:0000914!2.68e-16!83;UBERON:0002329!2.68e-16!83;UBERON:0003077!2.68e-16!83;UBERON:0003059!2.68e-16!83;UBERON:0007282!2.68e-16!83;UBERON:0009618!2.68e-16!83;UBERON:0007285!2.68e-16!83;UBERON:0000486!4.14e-15!82;UBERON:0001637!6.98e-13!42;UBERON:0003509!6.98e-13!42;UBERON:0004572!6.98e-13!42;UBERON:0002049!1.24e-11!79;UBERON:0007798!1.24e-11!79;UBERON:0004573!2.36e-11!33;UBERON:0004571!2.36e-11!33;UBERON:0000475!8.67e-10!365;UBERON:0001981!2.05e-09!60;UBERON:0007500!2.05e-09!60;UBERON:0004537!2.05e-09!60;UBERON:0006965!2.05e-09!60;UBERON:0001135!3.04e-09!15;UBERON:0000055!5.37e-09!69;UBERON:0005256!5.78e-09!143;UBERON:0004872!2.26e-08!84;UBERON:0004237!3.58e-08!10;UBERON:0004695!3.58e-08!10;UBERON:0002111!3.58e-08!10;UBERON:0004178!3.58e-08!10;UBERON:0002100!1.76e-07!216;UBERON:0000947!2.07e-07!21;UBERON:0010191!2.07e-07!21;UBERON:0004535!9.91e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.23e-15;33!UBERON:0004571;2.23e-15;33!UBERON:0001637;1.36e-13;42!UBERON:0003509;1.36e-13;42!UBERON:0004572;1.36e-13;42!UBERON:0004237;2.05e-11;10!UBERON:0004695;2.05e-11;10!UBERON:0002111;2.05e-11;10!UBERON:0004178;2.05e-11;10!UBERON:0000947;7.23e-11;21!UBERON:0010191;7.23e-11;21!UBERON:0007500;1.40e-10;56!UBERON:0001981;1.40e-10;56!UBERON:0004537;1.40e-10;56!UBERON:0001135;1.10e-08;15!UBERON:0004797;1.52e-08;4!UBERON:0000415;1.52e-08;4!UBERON:0007240;1.52e-08;4!UBERON:0005742;1.52e-08;4!UBERON:0005734;1.52e-08;4!UBERON:0004664;1.52e-08;4!UBERON:0004663;1.52e-08;4!UBERON:0001310;8.75e-08;4!UBERON:0000055;9.05e-08;65!UBERON:0000992;2.26e-07;13!UBERON:0010260;9.69e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,9.05e-21,42;UBERON:0003509,9.05e-21,42;UBERON:0004572,9.05e-21,42;UBERON:0004573,3.94e-17,33;UBERON:0004571,3.94e-17,33;UBERON:0007500,1.45e-16,59;UBERON:0001981,1.45e-16,59;UBERON:0004537,1.45e-16,59;UBERON:0006965,1.45e-16,59;UBERON:0000055,5.96e-16,68;UBERON:0001134,1.87e-14,62;UBERON:0002036,1.87e-14,62;UBERON:0003082,1.87e-14,62;UBERON:0002385,9.45e-14,64;UBERON:0001015,9.45e-14,64;UBERON:0000383,9.45e-14,64;UBERON:0002049,9.58e-14,78;UBERON:0007798,9.58e-14,78;UBERON:0004872,1.24e-13,83;UBERON:0007524,4.04e-13,73;UBERON:0002329,1.20e-12,71;UBERON:0003059,1.20e-12,71;UBERON:0007282,1.20e-12,71;UBERON:0004290,1.20e-12,71;UBERON:0009618,1.20e-12,71;UBERON:0003077,2.34e-12,72;UBERON:0007285,2.34e-12,72;UBERON:0004237,2.57e-11,10;UBERON:0004695,2.57e-11,10;UBERON:0002111,2.57e-11,10;UBERON:0004178,2.57e-11,10;UBERON:0000947,7.81e-11,21;UBERON:0010191,7.81e-11,21;UBERON:0007503,8.52e-11,78;UBERON:0000486,1.76e-10,83;UBERON:0004535,8.64e-10,109;UBERON:0001009,2.75e-09,112;UBERON:0000415,1.31e-08,4;UBERON:0007240,1.31e-08,4;UBERON:0005742,1.31e-08,4;UBERON:0005734,1.31e-08,4;UBERON:0004664,1.31e-08,4;UBERON:0004663,1.31e-08,4;UBERON:0001135,1.64e-08,15;UBERON:0001310,9.49e-08,4;UBERON:0003914,1.15e-07,117;UBERON:0000992,1.67e-07,13;UBERON:0005256,4.29e-07,122;UBERON:0010260,6.52e-07,9 | |||
|phase1_expression=1.99846217197612,0.214100523890983,0.845726424575827,2.00146596706261,0.893922188854576,6.10636966870258,2.53299878168311,0,0,0.245733936501509,0,0,0,0,0,2.01697543935533,0.602694528023977,4.38186054232424,2.92759679274304,0.369363174230364,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0.579606171470105,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0.383587685530591,0.722878304769133,0,0.579386075843295,2.3858578411533,0.486634870302636,0.378139268656271,0.221729397462564,0.43917392846563,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0.993943903390637,3.67228483827281,3.17782033951725,3.15520282823695,2.83734705758686,0,0,0,0.311211035399766,0,0.163461903113459,0.605429710579726,0,0,0,0,0.597794722207204,0.469737994575059,0.161872944368132,0.280901613404497,0,0.122834317311768,0,0,0.247266929278557,2.73048408581408,3.59309070908119,0.168336113954066,0,0.277064115484183,0,0.612975591598039,0.45071417671979,0.453728732640084,1.4351170855109,1.92201649936711,0.423863802319124,1.20036438433761,0.824420233907511,0.515281080091258,0.744467425326359,2.19409231913646,1.65642908774038,0.252433774244115,0.736399189138395,1.61646056818812,1.06502877754984,0.302256294682921,0.339121184620975,0.386521706326594,1.09098448236334,0.573609190778008,0,0.132529768321485,0.464775771478074,0.414644220061482,0,0,0,0.643240938192885,1.38134921352481,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0.245976877086227,0.343135620597051,0.439001141634502,1.1240175325762,1.20634766893957,0,0.325808305310325,0,0,0.231860809950154,1.29149563659404,0,0,0,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34557301214433,0.87192013766656,1.24675085895615,4.13669490424889,0,0,3.45719551560332,3.12022310734098,0,1.41849132023278,0,0,0,0.823240336780769,0.325736184293735,0,0,1.80863626235752,1.74306691720059,1.99945982364114,0,0,0,0,0,1.42636905040718,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0.215627574859517,0,0,1.30139853857622,0,0.335032530668698,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0.207970861530807,0.356857977594324,0.157702415033935,0.819989904948992,2.40756879782175,0,0,3.32112799267718,2.58116835958384,0.521301686808497,0,0,0,0,0,0,0,0.30239029332968,2.48107807818777,1.99500565274481,2.24528075546459,2.43464383585832,1.53512174720011,4.50390979202101,1.48418066444991,1.3878872442239,2.84098760501003,0.821271560138091,1.03850885836724,2.20799719073923,0.241718899183244,0.200506470303285,0.0920809889358963,0.34444334449382,1.63882051206045,0.262248829918848,0.902399225814824,0.231046011313244,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.769350375349168,0.656029291399411,0,0,0,0.082509499920588,0,0,3.21367859688319,0.580024309752732,0,0.15350367472613,0.137836572484531,0.107420244868274,0.290033387828457,0.170453254832202,1.06838442776085,0,0,0,0,5.11330104227014,6.2962469366128,2.7881490806424,0.616067160352178,1.06461206063404,2.60979897622522,2.59453906745488,1.5743737541619,0.372158369359667,0.632758849437452,1.14378116354295,0,0,3.18203247925937,0,0.539617372749944,1.09814811894422,0.235624804691373,0.606547444719948,0,1.26377536871694,0,1.70599442741899,1.05650146756755,0.9554993798559,0.989838023675989,5.65040583101214,2.2054613741845,0.66343897524122,1.31535265576129,0,0.655894752046633,2.43492452355245,1.239293992399,3.3803472303869,2.86822704408103,1.76848273823618,2.85336841185,0.354761064070598,0.844430541190656,0.329294892959902,0.75894634753143,0.349934720244983,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0.191505370132367,0,0,0.280797178113459,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,1.55832187032068,0,0,0.398495976502139,0,1.25966373927138,0.306806047506464,0,1.24415835064723,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.120596438625408,0,0,0,0.438770794307945,0,0,0.692552326534174,0,0,0,0,0,0.549585560411174,0,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0.216388639742091,0,0.530745387020035,0,0,0,0,0.134802265961354,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0.252746318513952,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,0.677942222341597,0.822251547880505,1.19228767021794,0.0633107959558787,0,0.320635281006135,0.213452994739353,0.19980960958213,0,0,0.171594997861965,0,0.248505071130865,0,0.407712618220842,0.313808538937,0,1.73370353940911,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0.27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| ||
|short_description=p8@TMEM200A | |||
}} | }} |
Latest revision as of 17:29, 24 September 2015
Short description: | p8@TMEM200A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TMEM200A_5end |
Coexpression cluster: | C714_Smooth_Fibroblast_Mesenchymal_mesenchymal_Myoblast_leiomyoma_Preadipocyte |
Association with transcript: | -146bp_to_ENST00000296978, uc003qca.2, uc010kfh.2_5end |
EntrezGene: | TMEM200A |
HGNC: | 21075 |
UniProt: | Q86VY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.82e-26 | 32 |
smooth muscle cell | 3.70e-19 | 43 |
smooth muscle myoblast | 3.70e-19 | 43 |
muscle cell | 7.79e-16 | 55 |
preadipocyte | 7.84e-16 | 12 |
muscle precursor cell | 1.31e-14 | 58 |
myoblast | 1.31e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.31e-14 | 58 |
electrically responsive cell | 1.65e-13 | 61 |
electrically active cell | 1.65e-13 | 61 |
somatic stem cell | 1.57e-11 | 433 |
aortic smooth muscle cell | 2.57e-11 | 10 |
multi fate stem cell | 5.40e-11 | 427 |
stem cell | 6.61e-11 | 441 |
fibroblast | 2.59e-09 | 76 |
fibroblast of tunica adventitia of artery | 1.31e-08 | 4 |
fibroblast of the aortic adventitia | 1.31e-08 | 4 |
smooth muscle cell of the umbilical artery | 9.49e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.20e-13 | 14 |
benign neoplasm | 8.69e-08 | 4 |
cell type benign neoplasm | 9.62e-07 | 3 |
leiomyoma | 9.62e-07 | 3 |