FFCP PHASE1:Hg19::chr6:157098579..157098634,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:157098579..157098634,+
|short_description=p4@ARID1B
|description=CAGE_peak_4_at_ARID1B_5end
|association_with_transcript=-428bp_to_ENST00000346085,ENST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57492 | |EntrezGene=57492 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18040 | |HGNC=18040 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NFD5 | |UniProt=Q8NFD5 | ||
|association_with_transcript=-428bp_to_ENST00000346085,ENST00000350026_5end | |||
|cluster_id=chr6:157098579..157098634,+ | |||
|coexpression_cluster_id=C1053 | |||
|description=CAGE_peak_4_at_ARID1B_5end | |||
|id=chr6:157098579..157098634,+ | |||
|ontology_enrichment_celltype=CL:0000542!4.65e-25!53;CL:0000051!4.65e-25!53;CL:0000838!8.12e-25!52;CL:0000738!5.62e-22!140;CL:0000037!6.90e-22!172;CL:0000566!6.90e-22!172;CL:0000988!1.04e-20!182;CL:0002032!5.07e-19!165;CL:0000837!5.07e-19!165;CL:0002087!1.39e-17!119;CL:0002031!2.94e-17!124;CL:0000945!1.16e-14!24;CL:0000826!1.16e-14!24;CL:0000791!1.66e-10!18;CL:0000789!1.66e-10!18;CL:0002420!1.66e-10!18;CL:0002419!1.66e-10!18;CL:0000790!1.66e-10!18;CL:0000236!4.12e-10!14;CL:0000084!9.22e-10!25;CL:0000827!9.22e-10!25;CL:0000625!4.20e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000542;4.38e-16;53!CL:0000945;4.95e-16;24!CL:0000791;3.94e-11;18!CL:0000789;3.94e-11;18!CL:0002419;3.94e-11;18!CL:0000236;2.50e-10;13!CL:0000084;2.64e-10;25!CL:0002087;1.16e-07;104!CL:0000625;1.64e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,9.27e-27,53;CL:0000051,9.27e-27,53;CL:0000738,9.62e-27,136;CL:0000838,1.69e-26,52;CL:0000037,4.26e-26,168;CL:0000988,7.85e-25,177;CL:0002032,7.57e-23,161;CL:0000837,7.57e-23,161;CL:0002087,2.21e-21,115;CL:0002031,5.65e-21,120;CL:0000945,1.12e-15,24;CL:0000826,1.12e-15,24;CL:0000791,3.37e-11,18;CL:0000789,3.37e-11,18;CL:0002420,3.37e-11,18;CL:0002419,3.37e-11,18;CL:0000790,3.37e-11,18;CL:0000236,8.97e-11,14;CL:0000084,2.73e-10,25;CL:0000827,2.73e-10,25;CL:0000625,1.55e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;4.38e-16;53!CL:0000790;3.94e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.40e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.94e-08,114;UBERON:0002193,1.51e-07,108 | |||
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| ||
|short_description=p4@ARID1B | |||
}} | }} |
Latest revision as of 09:45, 16 September 2015
Short description: | p4@ARID1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARID1B_5end |
Coexpression cluster: | C1053_CD19_CD4_Natural_CD8_Peripheral_granulocyte_tonsil |
Association with transcript: | -428bp_to_ENST00000346085, ENST00000350026_5end |
EntrezGene: | ARID1B |
HGNC: | 18040 |
UniProt: | Q8NFD5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 9.27e-27 | 53 |
common lymphoid progenitor | 9.27e-27 | 53 |
leukocyte | 9.62e-27 | 136 |
lymphoid lineage restricted progenitor cell | 1.69e-26 | 52 |
hematopoietic stem cell | 4.26e-26 | 168 |
hematopoietic cell | 7.85e-25 | 177 |
hematopoietic oligopotent progenitor cell | 7.57e-23 | 161 |
hematopoietic multipotent progenitor cell | 7.57e-23 | 161 |
nongranular leukocyte | 2.21e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 5.65e-21 | 120 |
lymphocyte of B lineage | 1.12e-15 | 24 |
pro-B cell | 1.12e-15 | 24 |
mature alpha-beta T cell | 3.37e-11 | 18 |
alpha-beta T cell | 3.37e-11 | 18 |
immature T cell | 3.37e-11 | 18 |
mature T cell | 3.37e-11 | 18 |
immature alpha-beta T cell | 3.37e-11 | 18 |
B cell | 8.97e-11 | 14 |
T cell | 2.73e-10 | 25 |
pro-T cell | 2.73e-10 | 25 |
CD8-positive, alpha-beta T cell | 1.55e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.94e-08 | 114 |
hemolymphoid system | 1.51e-07 | 108 |