FFCP PHASE1:Hg19::chr10:104262460..104262489,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=10121 | |EntrezGene=10121 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=167 | |HGNC=167 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=P61163,B4DXP9,F5H3I4 | |UniProt=P61163,B4DXP9,F5H3I4 | ||
|association_with_transcript=0bp_to_ENST00000369905,ENST00000446605,ENST00000545684_5end | |association_with_transcript=0bp_to_ENST00000369905,ENST00000446605,ENST00000545684_5end | ||
|cluster_id=chr10:104262460..104262489,- | |||
|description=CAGE_peak_1_at_ACTR1A_5end | |description=CAGE_peak_1_at_ACTR1A_5end | ||
|id=chr10:104262460..104262489,- | |id=chr10:104262460..104262489,- |
Latest revision as of 01:33, 16 September 2015
Short description: | p1@ACTR1A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ACTR1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000369905, ENST00000446605, ENST00000545684_5end |
EntrezGene: | ACTR1A |
HGNC: | 167 |
UniProt: | P61163B4DXP9F5H3I4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@ACTR1A |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.05e-23 | 121 |
embryonic cell | 5.00e-20 | 250 |
smooth muscle cell | 2.82e-15 | 43 |
smooth muscle myoblast | 2.82e-15 | 43 |
electrically responsive cell | 7.22e-15 | 61 |
electrically active cell | 7.22e-15 | 61 |
muscle precursor cell | 2.18e-14 | 58 |
myoblast | 2.18e-14 | 58 |
multi-potent skeletal muscle stem cell | 2.18e-14 | 58 |
muscle cell | 4.24e-14 | 55 |
Showing 1 to 10 of 23 entries
Ontology term | p-value | n |
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cell layer | 2.81e-24 | 309 |
epithelium | 3.37e-23 | 306 |
vasculature | 6.41e-23 | 78 |
vascular system | 6.41e-23 | 78 |
vessel | 1.52e-19 | 68 |
epithelial vesicle | 1.36e-18 | 78 |
epithelial tube open at both ends | 1.10e-17 | 59 |
blood vessel | 1.10e-17 | 59 |
blood vasculature | 1.10e-17 | 59 |
vascular cord | 1.10e-17 | 59 |
Showing 1 to 10 of 76 entries