FFCP PHASE1:Hg19::chr10:121411071..121411091,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=9531 | |EntrezGene=9531 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=939 | |HGNC=939 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=O95817 | |UniProt=O95817 | ||
|association_with_transcript=189bp_to_ENST00000369085,NM_004281,uc001lel.2,uc001lem.2_5end | |association_with_transcript=189bp_to_ENST00000369085,NM_004281,uc001lel.2,uc001lem.2_5end | ||
|cluster_id=chr10:121411071..121411091,+ | |||
|description=CAGE_peak_2_at_BAG3_5end | |description=CAGE_peak_2_at_BAG3_5end | ||
|id=chr10:121411071..121411091,+ | |id=chr10:121411071..121411091,+ |
Latest revision as of 18:01, 16 September 2015
Short description: | p2@BAG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BAG3_5end |
Coexpression cluster: | NA |
Association with transcript: | 189bp_to_ENST00000369085, NM_004281, uc001lel.2, uc001lem.2_5end |
EntrezGene: | BAG3 |
HGNC: | 939 |
UniProt: | O95817 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@BAG3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.23e-14 | 121 |
vascular associated smooth muscle cell | 9.83e-12 | 32 |
smooth muscle cell | 7.60e-11 | 43 |
smooth muscle myoblast | 7.60e-11 | 43 |
muscle precursor cell | 3.83e-10 | 58 |
myoblast | 3.83e-10 | 58 |
multi-potent skeletal muscle stem cell | 3.83e-10 | 58 |
muscle cell | 1.15e-09 | 55 |
fibroblast | 5.73e-09 | 76 |
embryonic cell | 1.68e-07 | 250 |
Showing 1 to 10 of 12 entries
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 2.31e-24 | 83 |
anatomical conduit | 3.13e-23 | 240 |
epithelial tube | 8.17e-22 | 117 |
epithelial tube open at both ends | 1.07e-21 | 59 |
blood vessel | 1.07e-21 | 59 |
blood vasculature | 1.07e-21 | 59 |
vascular cord | 1.07e-21 | 59 |
epithelium | 5.37e-21 | 306 |
cell layer | 7.44e-21 | 309 |
vessel | 9.80e-21 | 68 |
Showing 1 to 10 of 69 entries