FFCP PHASE1:Hg19::chr6:25004791..25004799,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:25004791..25004799,-
|short_description=p@chr6:25004791..25004799,-
|description=CAGE_peak_at_chr6:25004791..25004799,-
|association_with_transcript=NA
|E...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:25004791..25004799,- | |||
|coexpression_cluster_id=C458 | |||
|description=CAGE_peak_at_chr6:25004791..25004799,- | |||
|id=chr6:25004791..25004799,- | |||
|ontology_enrichment_celltype=CL:0002623!9.11e-17!3;CL:0000622!3.05e-10!5;CL:0000154!1.34e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002623;2.33e-118;3!CL:0000622;1.56e-71;5!CL:0000154;8.14e-60;6!CL:0000150;2.91e-40;9!CL:0002251;1.12e-18;20!CL:0000151;1.83e-11;36!CL:0002569;7.01e-08;6!CL:0002076;2.60e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,2.33e-118,3;CL:0000622,1.56e-71,5;CL:0000154,8.15e-60,6;CL:0000150,2.91e-40,9;CL:0002251,1.12e-18,20;CL:0000151,9.21e-11,36;CL:0002076,2.45e-09,42;CL:0002569,6.78e-08,6;CL:0000223,5.78e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.01e-15!115;UBERON:0001044!1.74e-14!6;UBERON:0003293!1.74e-14!6;UBERON:0003294!1.74e-14!6;UBERON:0010047!1.74e-14!6;UBERON:0000167!1.74e-14!6;UBERON:0003408!1.05e-08!10;UBERON:0001017!1.55e-08!82;UBERON:0001049!3.26e-08!57;UBERON:0005068!3.26e-08!57;UBERON:0006241!3.26e-08!57;UBERON:0007135!3.26e-08!57;UBERON:0005743!5.09e-08!86;UBERON:0002616!7.70e-08!59;UBERON:0000924!8.21e-08!173;UBERON:0006601!8.21e-08!173;UBERON:0005383!9.66e-08!3;UBERON:0005382!9.66e-08!3;UBERON:0000988!2.20e-07!3;UBERON:0004121!3.48e-07!169;UBERON:0000073!5.13e-07!94;UBERON:0001016!5.13e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;8.14e-60;6!UBERON:0003293;8.14e-60;6!UBERON:0003294;8.14e-60;6!UBERON:0010047;8.14e-60;6!UBERON:0003408;8.14e-60;6!UBERON:0000167;8.14e-60;6!UBERON:0001041;2.90e-26;14!UBERON:0000007;6.30e-21;2!UBERON:0000161;1.31e-19;19!UBERON:0000166;1.31e-19;19!UBERON:0000165;1.34e-13;28!UBERON:0002365;9.49e-13;31!UBERON:0002330;9.49e-13;31!UBERON:0003296;3.60e-11;4!UBERON:0010133;3.60e-11;4!UBERON:0004921;3.59e-10;33!UBERON:0003422;7.01e-08;6!UBERON:0001894;6.21e-07;7!UBERON:0003104;6.21e-07;7!UBERON:0009142;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,8.15e-60,6;UBERON:0003293,8.15e-60,6;UBERON:0003294,8.15e-60,6;UBERON:0010047,8.15e-60,6;UBERON:0000167,8.15e-60,6;UBERON:0003408,2.40e-36,10;UBERON:0000007,6.96e-21,2;UBERON:0000166,4.60e-17,22;UBERON:0000165,3.69e-13,29;UBERON:0000930,3.69e-13,29;UBERON:0002365,2.30e-12,31;UBERON:0002330,2.30e-12,31;UBERON:0002530,1.96e-11,59;UBERON:0003296,3.79e-11,4;UBERON:0010133,3.79e-11,4;UBERON:0000161,9.21e-11,36;UBERON:0001444,4.12e-08,49;UBERON:0003422,6.78e-08,6;UBERON:0000033,3.45e-07,56;UBERON:0001894,6.39e-07,7;UBERON:0006222,6.39e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17048642156577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0.320362237703084,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0.548257766857182,0,0,0,0,0.336283722218824,0,2.04895972216168,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0,0,0,0,0,5.80205259656503,13.9989151217039,11.0601545890255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17048642156577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0.320362237703084,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0.548257766857182,0,0,0,0,0.336283722218824,0,2.04895972216168,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0,0,0,0,0,5.80205259656503,13.9989151217039,11.0601545890255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | ||
|short_description=p@chr6:25004791..25004799,- | |||
}} | }} |
Latest revision as of 22:50, 30 July 2015
Short description: | p@chr6:25004791..25004799, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:25004791..25004799, - |
Coexpression cluster: | C458_salivary_parietal_middle_locus_medial_occipital_globus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 2.33e-118 | 3 |
acinar cell | 1.56e-71 | 5 |
protein secreting cell | 8.15e-60 | 6 |
glandular epithelial cell | 2.91e-40 | 9 |
epithelial cell of alimentary canal | 1.12e-18 | 20 |
secretory cell | 9.21e-11 | 36 |
endo-epithelial cell | 2.45e-09 | 42 |
mesenchymal stem cell of umbilical cord | 6.78e-08 | 6 |
endodermal cell | 5.78e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 8.15e-60 | 6 |
gland of oral region | 8.15e-60 | 6 |
gland of foregut | 8.15e-60 | 6 |
oral gland | 8.15e-60 | 6 |
oral cavity | 8.15e-60 | 6 |
gland of gut | 2.40e-36 | 10 |
pituitary gland | 6.96e-21 | 2 |
oral opening | 4.60e-17 | 22 |
mouth | 3.69e-13 | 29 |
stomodeum | 3.69e-13 | 29 |
exocrine gland | 2.30e-12 | 31 |
exocrine system | 2.30e-12 | 31 |
gland | 1.96e-11 | 59 |
gland of diencephalon | 3.79e-11 | 4 |
neuroendocrine gland | 3.79e-11 | 4 |
orifice | 9.21e-11 | 36 |
subdivision of head | 4.12e-08 | 49 |
mesenchyme of umbilical cord | 6.78e-08 | 6 |
head | 3.45e-07 | 56 |
diencephalon | 6.39e-07 | 7 |
future diencephalon | 6.39e-07 | 7 |