FFCP PHASE1:Hg19::chr6:35218350..35218364,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:35218350..35218364,+
|short_description=p2@AK123742
|description=CAGE_peak_2_at_AK123742_5end
|association_with_transcript=-488bp_to_AK123742_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-488bp_to_AK123742_5end | |||
|cluster_id=chr6:35218350..35218364,+ | |||
|coexpression_cluster_id=C519 | |||
|description=CAGE_peak_2_at_AK123742_5end | |||
|id=chr6:35218350..35218364,+ | |||
|ontology_enrichment_celltype=CL:0002334!9.98e-19!12;CL:0000057!2.41e-17!75;CL:0000055!1.64e-16!180;CL:0002620!3.77e-13!23;CL:0000034!1.93e-08!444;CL:0000048!2.71e-08!430;CL:0002580!5.40e-08!3;CL:0000723!5.98e-08!436;CL:0002579!6.18e-08!3;CL:0000188!8.79e-08!9;CL:0002320!4.29e-07!365;CL:0002564!7.18e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002334;3.63e-50;12!CL:0002582;9.12e-18;3!CL:0002579;1.22e-17;3!CL:0002580;2.11e-17;3!CL:0002583;1.16e-07;2!CL:0000057;3.64e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,2.93e-50,12;CL:0002582,8.40e-18,3;CL:0002580,1.39e-17,3;CL:0002579,1.51e-17,3;CL:0000057,3.02e-15,76;CL:0002583,1.20e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;1.10e-13;1!DOID:4235;1.10e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,7.55e-14,1;DOID:4235,1.83e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!7.16e-10!6;UBERON:0002358!7.16e-10!6;UBERON:0003684!7.16e-10!6;UBERON:0001178!7.16e-10!6;UBERON:0002384!5.46e-08!375;UBERON:0002199!2.02e-07!45;UBERON:0002416!2.02e-07!45;UBERON:0002242!7.18e-07!3;UBERON:0003068!7.18e-07!3;UBERON:0002328!7.18e-07!3;UBERON:0004880!7.18e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.71e-19;6!UBERON:0002358;1.71e-19;6!UBERON:0003684;1.71e-19;6!UBERON:0001178;1.71e-19;6!UBERON:0004457;3.30e-13;9!UBERON:0000042;3.30e-13;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.07e-19,6;UBERON:0002358,2.07e-19,6;UBERON:0003684,2.07e-19,6;UBERON:0001178,2.07e-19,6;UBERON:0004457,5.22e-10,12;UBERON:0000042,5.22e-10,12 | |||
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|phase1_expression=0.908391896352783,0.642301571672949,0.281908808191942,3.00219895059391,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.144846518960824,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0,0,0,0,0.560677600142307,0,0,0,0,0.163461903113459,0,0,0,0.624320153660641,0,0.597794722207204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0.538168907066586,0,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0.337552664482532,0.194874010322397,0.757301322732344,0.276149695926898,0,1.77504796258307,0.403008392910561,1.18692414617341,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0.845302752556,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30303176000821,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0,0,0,0,0.601892199455438,0,0,1.99267679560631,0.184369168541703,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0.30239029332968,0.496215615637554,1.99500565274481,1.40330047216537,0.384417447767103,2.55853624533352,1.12597744800525,0,2.46735510084249,0.887808626565635,1.72467027628999,0,5.57809816607804,0,0,0,0.114814448164607,0.182091168006717,0.524497659837696,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.290012154876366,0,0.307007349452259,0.137836572484531,0.537101224341368,0,0.255679882248303,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.545999645631943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217294743844016,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0.447764408660622,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0,0,1.0195626881269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,3.46101249699031,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@AK123742 | |||
}} | }} |
Latest revision as of 00:59, 31 July 2015
Short description: | p2@AK123742 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AK123742_5end |
Coexpression cluster: | C519_Preadipocyte_Ewing_Myoblast_spindle_Fibroblast_Adipocyte_Osteoblast |
Association with transcript: | -488bp_to_AK123742_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 2.93e-50 | 12 |
visceral preadipocyte | 8.40e-18 | 3 |
preadipocyte of the breast | 1.39e-17 | 3 |
omentum preadipocyte | 1.51e-17 | 3 |
fibroblast | 3.02e-15 | 76 |
subcutaneous preadipocyte | 1.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.07e-19 | 6 |
peritoneum | 2.07e-19 | 6 |
abdominal cavity | 2.07e-19 | 6 |
visceral peritoneum | 2.07e-19 | 6 |
cavity lining | 5.22e-10 | 12 |
serous membrane | 5.22e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 7.55e-14 | 1 |
spindle cell sarcoma | 1.83e-13 | 1 |