FFCP PHASE1:Hg19::chr6:42690079..42690089,-: Difference between revisions
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|id=chr6:42690079..42690089,-
|short_description=p4@PRPH2
|description=CAGE_peak_4_at_PRPH2_5end
|association_with_transcript=222bp_to_ENST00000230381_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5961 | |EntrezGene=5961 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9942 | |HGNC=9942 | ||
|TSSclassifier=strong | |||
|UniProt=P23942 | |UniProt=P23942 | ||
|association_with_transcript=222bp_to_ENST00000230381_5end | |||
|cluster_id=chr6:42690079..42690089,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_4_at_PRPH2_5end | |||
|id=chr6:42690079..42690089,- | |||
|ontology_enrichment_celltype=CL:0000306!3.79e-11!4;CL:0002222!3.79e-11!4;CL:0002224!3.79e-11!4 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!1.05e-79!2;UBERON:0002757!1.05e-79!2;UBERON:0010134!1.05e-79!2;UBERON:0002784!1.05e-79!2;UBERON:0005408!1.05e-79!2;UBERON:0001899!1.05e-79!2;UBERON:0003296!1.48e-40!4;UBERON:0010133!1.48e-40!4;UBERON:0001894!1.02e-23!7;UBERON:0006222!1.02e-23!7;UBERON:0000970!1.60e-18!20;UBERON:0002104!1.10e-17!21;UBERON:0000020!3.17e-16!23;UBERON:0001032!1.38e-15!24;UBERON:0004456!1.38e-15!24;UBERON:0010077!3.79e-11!4;UBERON:0005389!3.79e-11!4;UBERON:0000484!3.79e-11!4;UBERON:0002546!3.79e-11!4;UBERON:0000965!3.79e-11!4;UBERON:0001803!3.79e-11!4;UBERON:0003073!3.79e-11!4;UBERON:0005426!3.79e-11!4;UBERON:0003056!6.67e-11!61;UBERON:0000019!2.56e-09!19;UBERON:0000047!2.56e-09!19;UBERON:0004088!2.56e-09!19;UBERON:0003072!2.56e-09!19;UBERON:0003071!2.56e-09!19;UBERON:0004128!2.56e-09!19;UBERON:0000966!3.22e-09!5;UBERON:0005388!3.22e-09!5;UBERON:0001802!3.22e-09!5;UBERON:0001456!1.59e-08!21;UBERON:0003075!5.98e-08!86;UBERON:0007284!5.98e-08!86;UBERON:0002346!1.26e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.61e-131;2!UBERON:0002757;4.61e-131;2!UBERON:0010134;4.61e-131;2!UBERON:0005408;4.61e-131;2!UBERON:0001899;4.61e-131;2!UBERON:0003296;2.40e-66;4!UBERON:0010133;2.40e-66;4!UBERON:0002784;2.40e-66;4!UBERON:0001894;1.49e-38;7!UBERON:0000949;5.39e-08;43!UBERON:0002368;5.42e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.61e-131,2;UBERON:0002757,4.61e-131,2;UBERON:0010134,4.61e-131,2;UBERON:0005408,4.61e-131,2;UBERON:0001899,4.61e-131,2;UBERON:0003296,2.40e-66,4;UBERON:0010133,2.40e-66,4;UBERON:0002784,2.40e-66,4;UBERON:0001894,1.49e-38,7;UBERON:0006222,1.49e-38,7;UBERON:0002368,1.09e-08,35;UBERON:0002780,2.04e-07,41;UBERON:0001890,2.04e-07,41;UBERON:0003080,2.04e-07,41;UBERON:0006240,2.04e-07,41;UBERON:0000949,5.42e-07,45 | |||
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|short_description=p4@PRPH2 | |||
}} | }} |
Latest revision as of 20:22, 18 September 2015
Short description: | p4@PRPH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PRPH2_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 222bp_to_ENST00000230381_5end |
EntrezGene: | PRPH2 |
HGNC: | 9942 |
UniProt: | P23942 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 4.61e-131 | 2 |
regional part of epithalamus | 4.61e-131 | 2 |
secretory circumventricular organ | 4.61e-131 | 2 |
circumventricular organ | 4.61e-131 | 2 |
epithalamus | 4.61e-131 | 2 |
gland of diencephalon | 2.40e-66 | 4 |
neuroendocrine gland | 2.40e-66 | 4 |
regional part of diencephalon | 2.40e-66 | 4 |
diencephalon | 1.49e-38 | 7 |
future diencephalon | 1.49e-38 | 7 |
endocrine gland | 1.09e-08 | 35 |
regional part of forebrain | 2.04e-07 | 41 |
forebrain | 2.04e-07 | 41 |
anterior neural tube | 2.04e-07 | 41 |
future forebrain | 2.04e-07 | 41 |
endocrine system | 5.42e-07 | 45 |