FFCP PHASE1:Hg19::chr6:64282212..64282247,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:64282212..64282247,+
|short_description=p19@PTP4A1
|description=CAGE_peak_19_at_PTP4A1_5end
|association_with_transcript=-146bp_to_ENST00000370651_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7803 | |EntrezGene=7803 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9634 | |HGNC=9634 | ||
|TSSclassifier=strong | |||
|UniProt=Q93096 | |UniProt=Q93096 | ||
|association_with_transcript=-146bp_to_ENST00000370651_5end | |||
|cluster_id=chr6:64282212..64282247,+ | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_19_at_PTP4A1_5end | |||
|id=chr6:64282212..64282247,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.46e-08!254;CL:0000223!2.96e-07!59;CL:0000181!5.49e-07!12;CL:0000417!5.49e-07!12;CL:0000668!5.49e-07!12;CL:0000414!5.49e-07!12;CL:0000412!5.49e-07!12;CL:0000182!5.49e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.67e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.65e-10,12;CL:0000066,1.26e-08,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.19e-25;29!UBERON:0009497;1.90e-14;13!UBERON:0004161;2.77e-11;11!UBERON:0001041;1.31e-08;30!UBERON:0006595;2.62e-08;86 | |||
|ontology_enrichment_disease=DOID:305!3.12e-11!106;DOID:0050687!1.91e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.81e-20,106;DOID:0050687,3.54e-14,143;DOID:162,2.48e-08,235;DOID:14566,4.38e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!7.95e-14!9;UBERON:0004119!1.79e-08!169;UBERON:0000925!1.79e-08!169;UBERON:0006595!1.79e-08!169;UBERON:0003929!6.59e-08!54;UBERON:0001007!9.58e-08!155;UBERON:0001555!9.58e-08!155;UBERON:0007026!9.58e-08!155;UBERON:0008835!4.47e-07!22;UBERON:0003894!4.47e-07!22;UBERON:0004921!5.04e-07!129;UBERON:0004185!5.04e-07!129;UBERON:0009497!7.59e-07!25;UBERON:0000015!7.59e-07!25;UBERON:0002423!7.59e-07!25;UBERON:0006235!7.59e-07!25;UBERON:0004161!7.59e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.78e-68;9!UBERON:0001557;2.78e-68;9!UBERON:0000072;2.08e-17;37!UBERON:0002423;2.78e-14;25!UBERON:0000065;3.12e-14;44!UBERON:0002107;3.58e-14;19!UBERON:0006925;3.58e-14;19!UBERON:0002368;5.47e-10;33!UBERON:0002365;4.81e-08;31!UBERON:0002330;4.81e-08;31!UBERON:0001004;1.30e-07;65!UBERON:0000949;5.37e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.39e-68,9;UBERON:0001557,9.79e-32,19;UBERON:0001041,1.75e-22,87;UBERON:0008947,1.04e-18,38;UBERON:0003258,1.04e-18,38;UBERON:0004921,1.10e-17,118;UBERON:0008835,2.05e-16,22;UBERON:0003894,2.05e-16,22;UBERON:0009854,1.14e-15,23;UBERON:0000072,8.08e-15,47;UBERON:0007499,2.35e-14,25;UBERON:0009497,2.35e-14,25;UBERON:0000015,2.35e-14,25;UBERON:0002423,2.35e-14,25;UBERON:0006235,2.35e-14,25;UBERON:0004161,2.35e-14,25;UBERON:0002107,3.07e-14,19;UBERON:0006925,3.07e-14,19;UBERON:0008836,3.07e-14,19;UBERON:0001007,8.40e-14,145;UBERON:0001555,8.40e-14,145;UBERON:0007026,8.40e-14,145;UBERON:0009856,8.98e-14,26;UBERON:0000065,1.09e-12,54;UBERON:0004119,3.31e-12,160;UBERON:0000925,3.31e-12,160;UBERON:0006595,3.31e-12,160;UBERON:0001048,8.57e-11,160;UBERON:0002368,5.34e-10,35;UBERON:0011216,6.25e-10,223;UBERON:0001004,7.98e-09,74;UBERON:0002365,1.55e-08,31;UBERON:0002330,1.55e-08,31;UBERON:0003929,4.74e-08,54;UBERON:0000949,1.34e-07,45;UBERON:0002530,2.94e-07,59 | |||
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| ||
|short_description=p19@PTP4A1 | |||
}} | }} |
Latest revision as of 12:23, 19 September 2015
Short description: | p19@PTP4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_PTP4A1_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | -146bp_to_ENST00000370651_5end |
EntrezGene: | PTP4A1 |
HGNC: | 9634 |
UniProt: | Q93096 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.65e-10 | 12 |
epithelial cell | 1.26e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.81e-20 | 106 |
cell type cancer | 3.54e-14 | 143 |
cancer | 2.48e-08 | 235 |
disease of cellular proliferation | 4.38e-08 | 239 |