FFCP PHASE1:Hg19::chr2:27994567..27994641,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=9553 | |EntrezGene=9553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=14487 | |HGNC=14487 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=O75394,Q5FVE3,F8WF37 | |UniProt=O75394,Q5FVE3,F8WF37 | ||
|association_with_transcript=0bp_to_ENST00000296102,ENST00000379666,ENST00000448427,ENST00000472192,NM_004891,NM_145330,uc002rlm.1,uc002rln.1_5end | |association_with_transcript=0bp_to_ENST00000296102,ENST00000379666,ENST00000448427,ENST00000472192,NM_004891,NM_145330,uc002rlm.1,uc002rln.1_5end | ||
|cluster_id=chr2:27994567..27994641,+ | |||
|coexpression_cluster_id=C102 | |coexpression_cluster_id=C102 | ||
|description=CAGE_peak_1_at_MRPL33_5end | |description=CAGE_peak_1_at_MRPL33_5end |
Latest revision as of 18:20, 16 September 2015
Short description: | p1@MRPL33 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MRPL33_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 0bp_to_ENST00000296102, ENST00000379666, ENST00000448427, ENST00000472192, NM_004891, NM_145330, uc002rlm.1, uc002rln.1_5end |
EntrezGene: | MRPL33 |
HGNC: | 14487 |
UniProt: | O75394Q5FVE3F8WF37 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@MRPL33 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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kidney cell | 6.35e-07 | 17 |
kidney epithelial cell | 6.35e-07 | 17 |
Showing 1 to 2 of 2 entries
Ontology term | p-value | n |
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epithelium | 4.81e-13 | 306 |
cell layer | 1.32e-12 | 309 |
mesenchyme | 7.41e-10 | 160 |
entire embryonic mesenchyme | 7.41e-10 | 160 |
tube | 9.10e-10 | 192 |
structure with developmental contribution from neural crest | 6.10e-09 | 132 |
trunk | 3.49e-08 | 199 |
anatomical conduit | 4.00e-08 | 240 |
trunk mesenchyme | 1.08e-07 | 122 |
neural plate | 5.87e-07 | 82 |
Showing 1 to 10 of 11 entries