FFCP PHASE1:Hg19::chr2:74129486..74129511,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC= | |HGNC= | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-144bp_to_AK129589_5end | |association_with_transcript=-144bp_to_AK129589_5end | ||
|cluster_id=chr2:74129486..74129511,+ | |||
|coexpression_cluster_id=C48 | |coexpression_cluster_id=C48 | ||
|description=CAGE_peak_3_at_AK129589_5end | |description=CAGE_peak_3_at_AK129589_5end |
Latest revision as of 12:12, 29 July 2015
Short description: | p3@AK129589 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AK129589_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | -144bp_to_AK129589_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@AK129589 |
---|
0
10
20
30
40
50
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical artery | 2.79e-17 | 4 |
prostate stromal cell | 9.50e-13 | 3 |
Showing 1 to 2 of 2 entries
Ontology term | p-value | n |
---|---|---|
intestine | 2.21e-18 | 17 |
umbilical artery | 2.79e-17 | 4 |
hindgut | 2.75e-16 | 19 |
gastrointestinal system | 4.00e-15 | 25 |
male genital duct | 2.31e-14 | 3 |
internal male genitalia | 2.31e-14 | 3 |
male organism | 3.59e-14 | 22 |
male reproductive system | 3.59e-14 | 22 |
cloaca | 1.49e-13 | 14 |
anal region | 1.49e-13 | 14 |
Showing 1 to 10 of 44 entries