FFCP PHASE1:Hg19::chr7:120591183..120591244,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:120591183..120591244,+
|short_description=p2@ING3
|description=CAGE_peak_2_at_ING3_5end
|association_with_transcript=13bp_to_ENST00000431467,uc011kns.1_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54556 | |EntrezGene=54556 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14587 | |HGNC=14587 | ||
|TSSclassifier=strong | |||
|UniProt=E7ET07 | |UniProt=E7ET07 | ||
|association_with_transcript=13bp_to_ENST00000431467,uc011kns.1_5end | |||
|cluster_id=chr7:120591183..120591244,+ | |||
|description=CAGE_peak_2_at_ING3_5end | |||
|id=chr7:120591183..120591244,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.89e-34!140;CL:0000037!1.24e-31!172;CL:0000566!1.24e-31!172;CL:0002032!1.90e-30!165;CL:0000837!1.90e-30!165;CL:0002031!9.77e-30!124;CL:0002087!4.92e-29!119;CL:0000988!4.50e-28!182;CL:0000542!3.53e-23!53;CL:0000051!3.53e-23!53;CL:0000838!9.07e-23!52;CL:0000084!9.61e-15!25;CL:0000827!9.61e-15!25;CL:0000766!1.38e-12!76;CL:0000791!1.20e-11!18;CL:0000789!1.20e-11!18;CL:0002420!1.20e-11!18;CL:0002419!1.20e-11!18;CL:0000790!1.20e-11!18;CL:0000763!1.10e-10!112;CL:0000049!1.10e-10!112;CL:0000839!5.57e-10!70;CL:0000557!9.37e-09!71;CL:0000945!3.31e-08!24;CL:0000826!3.31e-08!24;CL:0002194!5.57e-08!63;CL:0000576!5.57e-08!63;CL:0000040!5.57e-08!63;CL:0000559!5.57e-08!63;CL:0000625!5.89e-08!11;CL:0000134!7.82e-08!358;CL:0002009!1.37e-07!65;CL:0002320!9.06e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000084;4.85e-17;25!CL:0000542;1.10e-14;53!CL:0000791;1.52e-13;18!CL:0000789;1.52e-13;18!CL:0002419;1.52e-13;18!CL:0000625;2.74e-09;11!CL:0002087;3.43e-08;104!CL:0000945;5.20e-08;24!CL:0000738;1.63e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.64e-37,136;CL:0000037,4.34e-34,168;CL:0002031,5.35e-33,120;CL:0002032,5.37e-33,161;CL:0000837,5.37e-33,161;CL:0002087,1.25e-32,115;CL:0000988,7.29e-31,177;CL:0000542,1.68e-26,53;CL:0000051,1.68e-26,53;CL:0000838,5.21e-26,52;CL:0000084,2.52e-17,25;CL:0000827,2.52e-17,25;CL:0000791,1.28e-13,18;CL:0000789,1.28e-13,18;CL:0002420,1.28e-13,18;CL:0002419,1.28e-13,18;CL:0000790,1.28e-13,18;CL:0000766,1.64e-13,72;CL:0000763,9.37e-11,108;CL:0000049,9.37e-11,108;CL:0000839,9.78e-11,66;CL:0000557,3.05e-09,67;CL:0000625,3.27e-09,11;CL:0000945,9.15e-09,24;CL:0000826,9.15e-09,24;CL:0002194,2.17e-08,59;CL:0000576,2.17e-08,59;CL:0000040,2.17e-08,59;CL:0000559,2.17e-08,59;CL:0002009,1.16e-07,61;CL:0000473,1.50e-07,48;CL:0000234,1.50e-07,48;CL:0000134,7.35e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000051;1.10e-14;53!CL:0000790;1.52e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.48e-13!115;UBERON:0001049!1.81e-11!57;UBERON:0005068!1.81e-11!57;UBERON:0006241!1.81e-11!57;UBERON:0007135!1.81e-11!57;UBERON:0002390!4.99e-11!102;UBERON:0003061!4.99e-11!102;UBERON:0002780!5.54e-10!41;UBERON:0001890!5.54e-10!41;UBERON:0006240!5.54e-10!41;UBERON:0002193!9.66e-10!112;UBERON:0003080!1.02e-09!42;UBERON:0002616!1.34e-09!59;UBERON:0001017!2.05e-09!82;UBERON:0005743!2.12e-08!86;UBERON:0000955!3.86e-08!69;UBERON:0006238!3.86e-08!69;UBERON:0002020!5.04e-08!34;UBERON:0003528!5.04e-08!34;UBERON:0001893!7.20e-08!34;UBERON:0001869!1.20e-07!32;UBERON:0002791!1.77e-07!33;UBERON:0000073!3.23e-07!94;UBERON:0001016!3.23e-07!94;UBERON:0001474!4.34e-07!86;UBERON:0002371!9.35e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.25e-07;53!UBERON:0002616;1.25e-07;53!UBERON:0002780;1.55e-07;41!UBERON:0001890;1.55e-07;41!UBERON:0001893;5.85e-07;34!UBERON:0003528;6.18e-07;34!UBERON:0002020;6.18e-07;34!UBERON:0001869;7.18e-07;32!UBERON:0002791;9.85e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.97e-13,56;UBERON:0005068,1.97e-13,56;UBERON:0006241,1.97e-13,56;UBERON:0007135,1.97e-13,56;UBERON:0000073,1.09e-12,53;UBERON:0002616,1.09e-12,53;UBERON:0007023,5.70e-12,114;UBERON:0002390,7.42e-12,98;UBERON:0003061,7.42e-12,98;UBERON:0002780,6.41e-11,41;UBERON:0001890,6.41e-11,41;UBERON:0003080,6.41e-11,41;UBERON:0006240,6.41e-11,41;UBERON:0001017,7.34e-11,81;UBERON:0002193,7.43e-11,108;UBERON:0000955,4.56e-09,68;UBERON:0006238,4.56e-09,68;UBERON:0001016,6.38e-09,89;UBERON:0003528,1.30e-08,34;UBERON:0002020,1.30e-08,34;UBERON:0001893,1.96e-08,34;UBERON:0002405,2.56e-08,93;UBERON:0001869,3.66e-08,32;UBERON:0001474,3.69e-08,82;UBERON:0002791,5.99e-08,32;UBERON:0003075,6.45e-08,82;UBERON:0007284,6.45e-08,82;UBERON:0002371,1.37e-07,76;UBERON:0002346,3.67e-07,86;UBERON:0002619,8.26e-07,22 | |||
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| ||
|short_description=p2@ING3 | |||
}} | }} |
Latest revision as of 21:48, 15 September 2015
Short description: | p2@ING3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ING3_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENST00000431467, uc011kns.1_5end |
EntrezGene: | ING3 |
HGNC: | 14587 |
UniProt: | E7ET07 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.97e-13 | 56 |
neural rod | 1.97e-13 | 56 |
future spinal cord | 1.97e-13 | 56 |
neural keel | 1.97e-13 | 56 |
regional part of nervous system | 1.09e-12 | 53 |
regional part of brain | 1.09e-12 | 53 |
adult organism | 5.70e-12 | 114 |
hematopoietic system | 7.42e-12 | 98 |
blood island | 7.42e-12 | 98 |
regional part of forebrain | 6.41e-11 | 41 |
forebrain | 6.41e-11 | 41 |
anterior neural tube | 6.41e-11 | 41 |
future forebrain | 6.41e-11 | 41 |
central nervous system | 7.34e-11 | 81 |
hemolymphoid system | 7.43e-11 | 108 |
brain | 4.56e-09 | 68 |
future brain | 4.56e-09 | 68 |
nervous system | 6.38e-09 | 89 |
brain grey matter | 1.30e-08 | 34 |
gray matter | 1.30e-08 | 34 |
telencephalon | 1.96e-08 | 34 |
immune system | 2.56e-08 | 93 |
cerebral hemisphere | 3.66e-08 | 32 |
bone element | 3.69e-08 | 82 |
regional part of telencephalon | 5.99e-08 | 32 |
neural plate | 6.45e-08 | 82 |
presumptive neural plate | 6.45e-08 | 82 |
bone marrow | 1.37e-07 | 76 |
neurectoderm | 3.67e-07 | 86 |
regional part of cerebral cortex | 8.26e-07 | 22 |