FFCP PHASE1:Hg19::chr7:150019741..150019774,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:150019741..150019774,+
|short_description=p3@LRRC61
|description=CAGE_peak_3_at_LRRC61_5end
|association_with_transcript=13bp_to_ENST00000471872_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=65999 | |EntrezGene=65999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21704 | |HGNC=21704 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=13bp_to_ENST00000471872_5end | |||
|cluster_id=chr7:150019741..150019774,+ | |||
|description=CAGE_peak_3_at_LRRC61_5end | |||
|id=chr7:150019741..150019774,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.51e-07!182;CL:0000037!2.27e-07!172;CL:0000566!2.27e-07!172;CL:0002032!2.30e-07!165;CL:0000837!2.30e-07!165;CL:0000077!6.57e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.54e-12;19!CL:0000990;4.11e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.35e-12,19;CL:0000990,3.99e-08,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.29e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.92e-20;14!DOID:193;1.45e-10;29!DOID:120;4.11e-10;27!DOID:1036;2.33e-08;8 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.20e-20,14;DOID:193,1.42e-10,29;DOID:120,3.92e-10,27;DOID:1036,3.13e-08,8;DOID:162,1.32e-07,235;DOID:14566,3.34e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.71e-08!9;UBERON:0000992!2.62e-07!13;UBERON:0001557!3.76e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.60e-15;9!UBERON:0001557;1.60e-15;9!UBERON:0000992;5.76e-12;13!UBERON:0002118;3.17e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.16e-15,9;UBERON:0000992,6.72e-12,13;UBERON:0002118,3.15e-11,5;UBERON:0001557,5.11e-08,19 | |||
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| ||
|short_description=p3@LRRC61 | |||
}} | }} |
Latest revision as of 02:36, 17 September 2015
Short description: | p3@LRRC61 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRRC61_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENST00000471872_5end |
EntrezGene: | LRRC61 |
HGNC: | 21704 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.35e-12 | 19 |
conventional dendritic cell | 3.99e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.16e-15 | 9 |
female gonad | 6.72e-12 | 13 |
right ovary | 3.15e-11 | 5 |
upper respiratory tract | 5.11e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.20e-20 | 14 |
reproductive organ cancer | 1.42e-10 | 29 |
female reproductive organ cancer | 3.92e-10 | 27 |
chronic leukemia | 3.13e-08 | 8 |
cancer | 1.32e-07 | 235 |
disease of cellular proliferation | 3.34e-07 | 239 |