FFCP PHASE1:Hg19::chr6:139349586..139349595,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=58527 | |EntrezGene=58527 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=21230 | |HGNC=21230 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q9P1F3 | |UniProt=Q9P1F3 | ||
|association_with_transcript=-223bp_to_ENST00000367660,NM_021243,uc003qil.2,uc003qim.2_5end | |association_with_transcript=-223bp_to_ENST00000367660,NM_021243,uc003qil.2,uc003qim.2_5end | ||
|cluster_id=chr6:139349586..139349595,+ | |||
|description=CAGE_peak_7_at_C6orf115_5end | |description=CAGE_peak_7_at_C6orf115_5end | ||
|id=chr6:139349586..139349595,+ | |id=chr6:139349586..139349595,+ | ||
Latest revision as of 05:40, 25 September 2015
| Short description: | p7@C6orf115 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_7_at_C6orf115_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -223bp_to_ENST00000367660, NM_021243, uc003qil.2, uc003qim.2_5end |
| EntrezGene: | C6orf115 |
| HGNC: | 21230 |
| UniProt: | Q9P1F3 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p7@C6orf115 |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| melanocyte | 4.18e-45 | 10 |
| melanoblast | 4.18e-45 | 10 |
| pigment cell | 1.46e-32 | 14 |
| neurecto-epithelial cell | 3.95e-23 | 20 |
| columnar/cuboidal epithelial cell | 2.09e-17 | 27 |
| ecto-epithelial cell | 5.01e-14 | 34 |
| visual pigment cell | 1.13e-13 | 4 |
| migratory neural crest cell | 2.75e-11 | 41 |
| cardiac fibroblast | 1.57e-09 | 6 |
| neurectodermal cell | 3.25e-08 | 59 |
Showing 1 to 10 of 12 entries
