FFCP PHASE1:Hg19::chr7:94047804..94047838,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:94047804..94047838,+
|short_description=p13@COL1A2
|description=CAGE_peak_13_at_COL1A2_5end
|association_with_transcript=0bp_to_L47668_5end
|EntrezGene=12...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1278 | |EntrezGene=1278 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2198 | |HGNC=2198 | ||
|TSSclassifier=strong | |||
|UniProt=P08123 | |UniProt=P08123 | ||
|association_with_transcript=0bp_to_L47668_5end | |||
|cluster_id=chr7:94047804..94047838,+ | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_13_at_COL1A2_5end | |||
|id=chr7:94047804..94047838,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.18e-42!180;CL:0000057!4.80e-25!75;CL:0000680!4.24e-20!57;CL:0000056!4.24e-20!57;CL:0000355!4.24e-20!57;CL:0000187!4.99e-19!54;CL:0000183!3.76e-18!59;CL:0000393!1.09e-16!60;CL:0000211!1.09e-16!60;CL:0000192!5.23e-15!42;CL:0000514!5.23e-15!42;CL:0000048!1.91e-14!430;CL:0000723!1.81e-13!436;CL:0000034!3.11e-12!444;CL:0000359!2.85e-11!32;CL:0002620!3.88e-11!23;CL:0002334!5.20e-08!12;CL:0002494!1.82e-07!16;CL:0002371!4.22e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.49e-12;55!CL:0000723;5.68e-12;61!CL:0000048;2.41e-11;58!CL:0000359;4.60e-10;32!CL:0000187;1.52e-09;55!CL:0000192;3.53e-09;43!CL:0002320;4.82e-09;188!CL:0000057;1.02e-08;73!CL:0002620;1.28e-08;23!CL:0000499;1.54e-08;28!CL:0000034;1.62e-08;69!CL:0000393;7.05e-08;61!CL:0000211;7.05e-08;61!CL:0002334;1.16e-07;12!CL:0002494;2.24e-07;16!CL:0000327;6.97e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.37e-22,76;CL:0000048,2.03e-22,427;CL:0000723,1.85e-21,433;CL:0000034,3.18e-20,441;CL:0000680,1.06e-18,58;CL:0000056,1.06e-18,58;CL:0000355,1.06e-18,58;CL:0000187,2.31e-17,55;CL:0000393,2.07e-14,61;CL:0000211,2.07e-14,61;CL:0000192,5.87e-13,43;CL:0000514,5.87e-13,43;CL:0002320,1.29e-10,361;CL:0000359,2.07e-10,32;CL:0000134,8.36e-10,354;CL:0002620,1.18e-08,23;CL:0000499,1.79e-08,28;CL:0002334,1.12e-07,12;CL:0000219,1.78e-07,386;CL:0002494,2.19e-07,16;CL:0000327,7.56e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000355;1.85e-09;58!CL:0000514;3.53e-09;43 | |||
|ontology_enrichment_disease=DOID:2394!9.07e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.92e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.30e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.22e-24!83;UBERON:0002329!4.22e-24!83;UBERON:0003077!4.22e-24!83;UBERON:0003059!4.22e-24!83;UBERON:0007282!4.22e-24!83;UBERON:0009618!4.22e-24!83;UBERON:0007285!4.22e-24!83;UBERON:0004290!5.15e-24!70;UBERON:0001134!6.15e-21!61;UBERON:0002036!6.15e-21!61;UBERON:0003082!6.15e-21!61;UBERON:0002385!2.00e-20!63;UBERON:0001015!2.00e-20!63;UBERON:0000383!2.00e-20!63;UBERON:0000486!2.68e-19!82;UBERON:0005256!8.64e-13!143;UBERON:0002100!7.73e-11!216;UBERON:0004872!8.30e-11!84;UBERON:0002199!9.95e-09!45;UBERON:0002416!9.95e-09!45;UBERON:0000948!1.74e-08!24;UBERON:0005498!1.74e-08!24;UBERON:0004140!1.74e-08!24;UBERON:0009881!1.74e-08!24;UBERON:0004141!1.74e-08!24;UBERON:0003084!1.74e-08!24;UBERON:0007005!1.74e-08!24;UBERON:0004139!1.74e-08!24;UBERON:0004291!1.74e-08!24;UBERON:0000475!1.92e-08!365;UBERON:0003102!2.59e-08!95;UBERON:0002097!5.95e-08!40;UBERON:0001637!7.58e-08!42;UBERON:0003509!7.58e-08!42;UBERON:0004572!7.58e-08!42;UBERON:0007100!1.60e-07!27;UBERON:0004535!3.01e-07!110;UBERON:0001009!5.23e-07!113;UBERON:0004573!6.22e-07!33;UBERON:0004571!6.22e-07!33;UBERON:0000490!7.18e-07!138;UBERON:0003104!7.98e-07!238;UBERON:0009142!7.98e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;4.77e-09;198!UBERON:0002385;3.01e-08;31!UBERON:0001015;3.01e-08;31!UBERON:0000383;3.01e-08;31!UBERON:0004457;3.56e-08;9!UBERON:0000042;3.56e-08;9!UBERON:0003688;1.18e-07;6!UBERON:0002358;1.18e-07;6!UBERON:0003684;1.18e-07;6!UBERON:0001178;1.18e-07;6!UBERON:0004573;1.20e-07;33!UBERON:0004571;1.20e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.13e-19,73;UBERON:0001134,2.43e-19,62;UBERON:0002036,2.43e-19,62;UBERON:0003082,2.43e-19,62;UBERON:0002329,2.53e-19,71;UBERON:0003059,2.53e-19,71;UBERON:0007282,2.53e-19,71;UBERON:0004290,2.53e-19,71;UBERON:0009618,2.53e-19,71;UBERON:0003077,7.78e-19,72;UBERON:0007285,7.78e-19,72;UBERON:0002385,2.80e-18,64;UBERON:0001015,2.80e-18,64;UBERON:0000383,2.80e-18,64;UBERON:0000486,2.20e-16,83;UBERON:0007503,3.39e-16,78;UBERON:0005256,1.07e-11,122;UBERON:0002384,1.08e-10,371;UBERON:0003104,1.82e-10,160;UBERON:0009142,1.82e-10,160;UBERON:0001637,8.81e-10,42;UBERON:0003509,8.81e-10,42;UBERON:0004572,8.81e-10,42;UBERON:0004872,1.14e-08,83;UBERON:0002199,1.38e-08,46;UBERON:0002416,1.38e-08,46;UBERON:0000926,1.56e-08,315;UBERON:0004120,1.56e-08,315;UBERON:0006603,1.56e-08,315;UBERON:0004573,3.21e-08,33;UBERON:0004571,3.21e-08,33;UBERON:0002097,4.14e-08,41;UBERON:0003688,1.42e-07,6;UBERON:0002358,1.42e-07,6;UBERON:0003684,1.42e-07,6;UBERON:0001178,1.42e-07,6;UBERON:0000490,1.66e-07,148;UBERON:0003102,4.66e-07,99;UBERON:0002100,7.72e-07,199 | |||
|phase1_expression=5.99538651592837,11.5614282901131,7.18867460889453,20.0146596706261,6.70441641640932,11.3404008133048,2.53299878168311,0,0.783556884599516,0.245733936501509,0,0,1.58260186937072,0.495065411840187,0.994192127183747,4.03395087871065,3.61616716814386,2.92124036154949,0.975865597581014,0.123121058076788,2.44800829493104,1.88072832886853,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,2.68280343881454,1.66221330396589,4.3372698286148,6.51739283826656,6.22840031531542,1.5905718941022,11.1926020169606,0.472674085820339,1.55210578223795,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,7.45457927542978,2.27934920996244,2.91300197789081,19.2180535901705,1.77334191099179,2.80338800071154,1.06748995729705,1.72667283892012,0.933633106199299,4.04132016209064,1.63461903113459,2.72443369760877,0.576175924479999,0.70296429550139,0.312160076830321,1.71141546463335,0.747243402759005,0.939475989150119,0.323745888736263,0.421352420106746,1.02077085627447,1.47401180774122,1.34323515528495,5.94001428641027,11.8688126053707,0,1.43723628363248,0,0.625592599359821,0.277064115484183,1.75591048352335,9.80760946556863,6.15976041517047,1.47461838108027,5.56107870635472,7.901623386287,4.23863802319124,7.80236849819446,2.88547081867629,12.1091053821446,3.35010341396862,6.58227695740938,4.48210223741514,3.78650661366172,4.51044503347267,5.81925804547723,8.87523981291536,3.12331504505685,2.20428770003634,0,0,0,0,0,0,0,0,0,4.69348596989448,7.71889125831462,2.76269842704961,2.78620756819187,3.60939740834793,0,0,0,0,0,0,0,0,0,0,0,3.2925920906512,5.88034845542168,0,0,0,0,0,0.514703430895577,0,0,0,0,0.325808305310325,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.336393253036082,1.30788020649984,0.4400297149257,2.71470603091333,7.15312891703765,6.762422020448,2.6593811658487,1.04007436911366,0.514414748524284,0,1.0656887160644,2.57360388584666,3.25572963234866,1.64648067356154,0.65147236858747,1.77695974371273,3.16780749173372,0.904318131178758,0,0.199945982364114,0,0,0,2.15662369942424,5.7430967917057,0,1.73737568001095,1.84928690295345,1.25342674267927,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.736148950314839,1.00034104211935,1.89885516589815,12.6862225533792,12.4900292158013,8.98903765693428,4.56851518471581,5.41702979509894,13.6444502433591,2.0694614258501,1.32845119707087,2.94990669666725,1.65078867489357,1.76221041716467,9.26487244289311,0,0,0,0,0,2.41912234663744,7.19512642674453,8.74733247741956,22.1721474602128,8.84160129864337,3.07024349440022,11.0989205589089,8.90508398669946,1.07946785661859,1.9531789784444,0.739144404124282,0.519254429183621,1.74315567689939,0,0,0,2.41110341145674,4.00600569614778,5.24497659837697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0.082509499920588,0,0,6.42735719376638,0.48335359146061,1.3864375540318,1.38153307253517,1.7918754422989,3.00776685631166,4.64053420525531,1.44885266607372,3.65031346151623,0,0,0,0,1.39453664789186,9.4443704049192,2.0911118104818,1.54016790088044,0,0,2.7798632865588,1.28812398067792,1.48863347743867,0.316379424718726,2.09693213316207,0.511795582622668,1.28381696410176,2.86382923133343,3.92474320099615,1.79872457583315,3.56898138656871,1.41374882814824,0.808729926293264,0,3.37006764991185,0.975267478179181,2.68084838594413,2.11300293513511,1.09199929126389,6.50464986987079,3.39024349860728,3.85955740482287,1.99031692572366,6.57676327880644,2.31510213706675,3.9353685122798,1.62328301570163,2.478587984798,2.81695602532241,0.573645408816206,0.491245205065606,2.49669736036875,0.709522128141196,4.85547561184627,7.24448764511784,0.379473173765715,2.0996083214699,0,0.670302275535787,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0,0.307160702099232,0,0,0.111308705022906,0,0,1.39473591775749,0,0,0,0,3.73247505194169,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923403102045565,0,0,0,0,0.957003479195758,1.19076871422421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05515072466813,0,0,0,0,12.8412423567806,0,0,0,0.242780379534093,0.789168805698781,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0.859930162358083,0,0,0,0.290967049465258,0,4.74559555639118,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0.407712618220842,0,0.101998217636322,0,0,0,0,1.28929632425987,0,1.67569440763353,0.229160424011684,0,0.798716001995964,0,0,0.470284307407084,6.84569778730567,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0.662091970365432,0.76280561296425,8.6879936280594,5.18532894720761,2.93928624098468,0,0,1.19271615249795,0,0,0,0,0.13223260174269,0,0,0.21357482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| ||
|short_description=p13@COL1A2 | |||
}} | }} |
Latest revision as of 02:39, 20 September 2015
Short description: | p13@COL1A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_COL1A2_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | 0bp_to_L47668_5end |
EntrezGene: | COL1A2 |
HGNC: | 2198 |
UniProt: | P08123 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.37e-22 | 76 |
multi fate stem cell | 2.03e-22 | 427 |
somatic stem cell | 1.85e-21 | 433 |
stem cell | 3.18e-20 | 441 |
muscle precursor cell | 1.06e-18 | 58 |
myoblast | 1.06e-18 | 58 |
multi-potent skeletal muscle stem cell | 1.06e-18 | 58 |
muscle cell | 2.31e-17 | 55 |
electrically responsive cell | 2.07e-14 | 61 |
electrically active cell | 2.07e-14 | 61 |
smooth muscle cell | 5.87e-13 | 43 |
smooth muscle myoblast | 5.87e-13 | 43 |
connective tissue cell | 1.29e-10 | 361 |
vascular associated smooth muscle cell | 2.07e-10 | 32 |
mesenchymal cell | 8.36e-10 | 354 |
skin fibroblast | 1.18e-08 | 23 |
stromal cell | 1.79e-08 | 28 |
preadipocyte | 1.12e-07 | 12 |
motile cell | 1.78e-07 | 386 |
cardiocyte | 2.19e-07 | 16 |
extracellular matrix secreting cell | 7.56e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.30e-07 | 14 |