FFCP PHASE1:Hg19::chrX:48114805..48114830,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=6756 | |EntrezGene=6756 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=11335 | |HGNC=11335 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q16384 | |UniProt=Q16384 | ||
|association_with_transcript=8bp_to_NM_005635,uc004djb.1_5end | |association_with_transcript=8bp_to_NM_005635,uc004djb.1_5end | ||
|cluster_id=chrX:48114805..48114830,+ | |||
|coexpression_cluster_id=C52 | |coexpression_cluster_id=C52 | ||
|description=CAGE_peak_1_at_SSX1_5end | |description=CAGE_peak_1_at_SSX1_5end |
Latest revision as of 17:47, 15 September 2015
Short description: | p1@SSX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SSX1_5end |
Coexpression cluster: | C52_adult_NK_chronic_cord_testis_embryonic_myeloma |
Association with transcript: | 8bp_to_NM_005635, uc004djb.1_5end |
EntrezGene: | SSX1 |
HGNC: | 11335 |
UniProt: | Q16384 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@SSX1 |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.37e-13 | 2 |
Showing 1 to 1 of 1 entries
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 5.93e-26 | 1 |
gallbladder | 1.67e-09 | 3 |
gall bladder primordium | 1.67e-09 | 3 |
Showing 1 to 3 of 3 entries
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.87e-28 | 8 |
leukemia | 1.32e-10 | 39 |
hematologic cancer | 3.33e-08 | 51 |
immune system cancer | 3.33e-08 | 51 |
myeloid leukemia | 7.90e-08 | 31 |
Showing 1 to 5 of 5 entries