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FFCP PHASE1:Hg19::chrX:48114805..48114830,+: Difference between revisions

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{{FFCP
{{FFCP
|DPIdataset=robustDPI
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=6756
|EntrezGene=6756
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=11335
|HGNC=11335
|TSSclassifier=W
|TSSclassifier=strong
|UniProt=Q16384
|UniProt=Q16384
|association_with_transcript=8bp_to_NM_005635,uc004djb.1_5end
|association_with_transcript=8bp_to_NM_005635,uc004djb.1_5end
|cluster_id=chrX:48114805..48114830,+
|coexpression_cluster_id=C52
|coexpression_cluster_id=C52
|description=CAGE_peak_1_at_SSX1_5end
|description=CAGE_peak_1_at_SSX1_5end

Latest revision as of 17:47, 15 September 2015

Short description:p1@SSX1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_SSX1_5end
Coexpression cluster:C52_adult_NK_chronic_cord_testis_embryonic_myeloma
Association with transcript: 8bp_to_NM_005635, uc004djb.1_5end
EntrezGene:SSX1
HGNC: 11335
UniProt: Q16384
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data