FFCP PHASE1:Hg19::chr7:99381798..99381813,-: Difference between revisions
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|id=chr7:99381798..99381813,-
|short_description=p1@CYP3A4
|description=CAGE_peak_1_at_CYP3A4_5end
|association_with_transcript=0bp_to_ENST00000354593,ENST000004150...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1576 | |EntrezGene=1576 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2637 | |HGNC=2637 | ||
|TSSclassifier=strong | |||
|UniProt=E7EVM8,C9JBD2,P08684,Q6GRK0 | |UniProt=E7EVM8,C9JBD2,P08684,Q6GRK0 | ||
|association_with_transcript=0bp_to_ENST00000354593,ENST00000415003,NM_001202855,NM_017460,uc003urv.1,uc003urw.1,uc011kiz.1,uc011kja.1,uc011kjb.1_5end | |||
|cluster_id=chr7:99381798..99381813,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_CYP3A4_5end | |||
|id=chr7:99381798..99381813,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;7.29e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.29e-08,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:114!9.04e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.58e-15!115;UBERON:0004921!1.42e-10!129;UBERON:0004185!1.42e-10!129;UBERON:0005057!8.95e-09!26;UBERON:0001007!6.17e-08!155;UBERON:0001555!6.17e-08!155;UBERON:0007026!6.17e-08!155;UBERON:0002107!2.53e-07!19;UBERON:0006925!2.53e-07!19;UBERON:0008836!2.53e-07!19;UBERON:0002365!3.55e-07!31;UBERON:0002330!3.55e-07!31;UBERON:0002530!3.97e-07!59;UBERON:0004119!7.26e-07!169;UBERON:0000925!7.26e-07!169;UBERON:0006595!7.26e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;7.03e-18;4!UBERON:0005409;1.45e-14;22!UBERON:0000160;2.97e-13;17!UBERON:0002107;1.04e-12;19!UBERON:0006925;1.04e-12;19!UBERON:0007029;1.69e-10;1!UBERON:0002423;1.26e-09;25!UBERON:0000922;3.89e-09;49!UBERON:0002368;5.64e-09;33!UBERON:0004921;6.93e-09;33!UBERON:0001007;1.76e-08;81!UBERON:0002365;9.85e-08;31!UBERON:0002330;9.85e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,7.03e-18,4;UBERON:0000160,2.97e-13,17;UBERON:0005409,7.71e-13,25;UBERON:0002107,1.04e-12,19;UBERON:0006925,1.04e-12,19;UBERON:0008836,1.04e-12,19;UBERON:0004921,1.68e-11,118;UBERON:0008835,5.85e-11,22;UBERON:0003894,5.85e-11,22;UBERON:0007029,1.61e-10,1;UBERON:0009854,1.78e-10,23;UBERON:0007499,1.26e-09,25;UBERON:0009497,1.26e-09,25;UBERON:0000015,1.26e-09,25;UBERON:0002423,1.26e-09,25;UBERON:0006235,1.26e-09,25;UBERON:0004161,1.26e-09,25;UBERON:0002368,1.60e-09,35;UBERON:0009856,3.00e-09,26;UBERON:0001007,5.55e-09,145;UBERON:0001555,5.55e-09,145;UBERON:0007026,5.55e-09,145;UBERON:0004119,6.01e-08,160;UBERON:0000925,6.01e-08,160;UBERON:0006595,6.01e-08,160;UBERON:0002365,9.94e-08,31;UBERON:0002330,9.94e-08,31;UBERON:0000949,2.66e-07,45;UBERON:0011216,4.90e-07,223 | |||
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| ||
|short_description=p1@CYP3A4 | |||
}} | }} |
Latest revision as of 16:34, 24 September 2015
Short description: | p1@CYP3A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CYP3A4_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000354593, ENST00000415003, NM_001202855, NM_017460, uc003urv.1, uc003urw.1, uc011kiz.1, uc011kja.1, uc011kjb.1_5end |
EntrezGene: | CYP3A4 |
HGNC: | 2637 |
UniProt: | E7EVM8C9JBD2P08684Q6GRK0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.29e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
small intestine | 7.03e-18 | 4 |
intestine | 2.97e-13 | 17 |
gastrointestinal system | 7.71e-13 | 25 |
liver | 1.04e-12 | 19 |
digestive gland | 1.04e-12 | 19 |
liver bud | 1.04e-12 | 19 |
subdivision of digestive tract | 1.68e-11 | 118 |
hepatic diverticulum | 5.85e-11 | 22 |
liver primordium | 5.85e-11 | 22 |
surface | 1.61e-10 | 1 |
digestive tract diverticulum | 1.78e-10 | 23 |
epithelial sac | 1.26e-09 | 25 |
epithelium of foregut-midgut junction | 1.26e-09 | 25 |
anatomical boundary | 1.26e-09 | 25 |
hepatobiliary system | 1.26e-09 | 25 |
foregut-midgut junction | 1.26e-09 | 25 |
septum transversum | 1.26e-09 | 25 |
endocrine gland | 1.60e-09 | 35 |
sac | 3.00e-09 | 26 |
digestive system | 5.55e-09 | 145 |
digestive tract | 5.55e-09 | 145 |
primitive gut | 5.55e-09 | 145 |
endoderm-derived structure | 6.01e-08 | 160 |
endoderm | 6.01e-08 | 160 |
presumptive endoderm | 6.01e-08 | 160 |
exocrine gland | 9.94e-08 | 31 |
exocrine system | 9.94e-08 | 31 |
endocrine system | 2.66e-07 | 45 |
organ system subdivision | 4.90e-07 | 223 |