FFCP PHASE1:Hg19::chr10:107729902..107729912,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:107729902..107729912,- | |||
|description=CAGE_peak_at_chr10:107729902..107729912,- | |||
|id=chr10:107729902..107729912,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.60e-10;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.98e-10,24;CL:0000826,1.98e-10,24 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.49e-08;3!UBERON:0003057;2.49e-08;3 | |||
|ontology_enrichment_disease_v019=DOID:4960;3.31e-07;1!DOID:0070004;3.31e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,3.32e-07,1;DOID:0070004,3.32e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.82e-24!57;UBERON:0005068!9.82e-24!57;UBERON:0006241!9.82e-24!57;UBERON:0007135!9.82e-24!57;UBERON:0002616!1.18e-20!59;UBERON:0001017!1.84e-18!82;UBERON:0000955!3.09e-18!69;UBERON:0006238!3.09e-18!69;UBERON:0002020!9.51e-18!34;UBERON:0003528!9.51e-18!34;UBERON:0001893!1.34e-17!34;UBERON:0002346!1.61e-17!90;UBERON:0005743!4.42e-17!86;UBERON:0000073!1.15e-16!94;UBERON:0001016!1.15e-16!94;UBERON:0002791!1.20e-16!33;UBERON:0002780!1.32e-16!41;UBERON:0001890!1.32e-16!41;UBERON:0006240!1.32e-16!41;UBERON:0003080!4.79e-16!42;UBERON:0001869!1.78e-15!32;UBERON:0003075!3.60e-15!86;UBERON:0007284!3.60e-15!86;UBERON:0007023!1.01e-13!115;UBERON:0000924!5.94e-11!173;UBERON:0006601!5.94e-11!173;UBERON:0002308!1.16e-10!9;UBERON:0000125!1.16e-10!9;UBERON:0002619!4.74e-10!22;UBERON:0000956!7.52e-10!25;UBERON:0000203!7.52e-10!25;UBERON:0003056!8.70e-10!61;UBERON:0000153!1.40e-09!129;UBERON:0007811!1.40e-09!129;UBERON:0001950!1.57e-09!20;UBERON:0004121!2.12e-09!169;UBERON:0000033!2.95e-09!123;UBERON:0002298!3.06e-09!8;UBERON:0003076!4.58e-09!15;UBERON:0003057!4.58e-09!15;UBERON:0002420!1.76e-08!9;UBERON:0007245!1.76e-08!9;UBERON:0010009!1.76e-08!9;UBERON:0010011!1.76e-08!9;UBERON:0000454!1.76e-08!9;UBERON:0009663!2.50e-08!7;UBERON:0004733!3.25e-07!12;UBERON:0002028!3.25e-07!12;UBERON:0007277!3.25e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0009663;1.89e-12;7!UBERON:0001875;1.06e-11;2!UBERON:0006514;1.06e-11;2!UBERON:0002420;1.03e-09;9!UBERON:0000125;1.03e-09;9!UBERON:0007245;1.03e-09;9!UBERON:0002308;1.03e-09;9!UBERON:0010009;1.03e-09;9!UBERON:0010011;1.03e-09;9!UBERON:0000454;1.03e-09;9!UBERON:0002240;2.49e-08;3!UBERON:0005174;2.49e-08;3!UBERON:0001137;2.49e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009663,2.50e-12,7;UBERON:0001875,1.19e-11,2;UBERON:0006514,1.19e-11,2;UBERON:0002420,1.28e-09,9;UBERON:0000125,1.28e-09,9;UBERON:0007245,1.28e-09,9;UBERON:0002308,1.28e-09,9;UBERON:0010009,1.28e-09,9;UBERON:0010011,1.28e-09,9;UBERON:0000454,1.28e-09,9;UBERON:0001049,2.77e-09,56;UBERON:0005068,2.77e-09,56;UBERON:0006241,2.77e-09,56;UBERON:0007135,2.77e-09,56;UBERON:0002240,1.97e-08,3;UBERON:0005174,1.97e-08,3;UBERON:0001137,1.97e-08,3;UBERON:0001016,3.51e-07,89;UBERON:0002791,6.03e-07,32;UBERON:0002780,7.03e-07,41;UBERON:0001890,7.03e-07,41;UBERON:0003080,7.03e-07,41;UBERON:0006240,7.03e-07,41;UBERON:0001874,8.27e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,2.59805579543034,3.28402357799783,2.51874500203774,0,0,0,0,0,0,1.08454080812422,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.392937226493138,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,1.14330573052231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0.385076685522074,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,2.94048259177238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.51692475380653,1.37402137902306,0.307240764308458,0.223676107892416,0.667396566847634,0.19538809540204,0,0,2.16364542780786,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.844016498463076,0.556543525114529,0,0,0,0,0,0,1.6001024709939,0,0.179736702294654,0,0,0,0,1.11136990144637,0,0.463840490809256,0,0,0.349839999984783,0,0.1137934482855,0.254253650292766,0,0,1.74962768029953,0.173624994933292,0,0.60298219312704,0,0.331737779793674,0.295547618953547,0,0,0,0.384751292518985,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,1.51472047819464,0,0,0,0,0,0,0.202203398942031,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,1.42304773014896,0.416024019039416,0,0,0.174118413160805,0,0,0,0,0.0821154570532092,0.0969890164884194,0.441280633457501,0,0.411125773940253,0.993573058514948,0.443175571691151,0,0.160317640503067,0,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0,0,1.20084057741958,1.23214841002794,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,1.01607998478941,0,1.0896272488926,0.160753148465019,0,0.415440338029185,0,0,0.425246896606173,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,1.35974509824151,0,0,0.129282956361551,0.79339561045614,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,1.09823638411767,0.751145584238999,0.573409195690071,1.66393577305278,0.434674820589684,0,0,3.94287705608284,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680117776536817,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,5.85530930846773,0,0.552317850755522,0,0,0,0,1.10086159299127,0,0,0.637724760305049,0.991486114072017,1.11728983594649,0,0.0788617450012534,0,0,0,0.0642292250964595,0,1.11743701340006,0.205116364240755,0.252071696221718,0.138314504928436,0.322951291263702,0,0.490738592505128,0.11796972334774,1.10057159113007,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.317079050969534,0,0,0,12.6627295938927,0,0,0,0,0.227662191351298,0.354809480650555,0,0,0.203909198930495,0.131545547125698,0,0.222462803784138,0.078493092850514,1.41404030924402,4.48435461302062,0,1.29556554731173,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0,0,0,0,0,1.37415926980462,2.97046400327086,0,0,0,0,0.199882311849858,0.178553938605658,1.76447435857846,0,0.730336388246517,0,1.00337708206016,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,1.33982065078089,0,1.44806194206653,0.213233981900981,0,0,0,0.897054900644907,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:107729902..107729912,- | |||
}} |
Latest revision as of 10:11, 23 July 2015
Short description: | p@chr10:107729902..107729912, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:107729902..107729912, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.98e-10 | 24 |
pro-B cell | 1.98e-10 | 24 |
Ontology term | p-value | n |
---|---|---|
telencephalic nucleus | 2.50e-12 | 7 |
globus pallidus | 1.19e-11 | 2 |
pallidum | 1.19e-11 | 2 |
basal ganglion | 1.28e-09 | 9 |
neural nucleus | 1.28e-09 | 9 |
nuclear complex of neuraxis | 1.28e-09 | 9 |
nucleus of brain | 1.28e-09 | 9 |
aggregate regional part of brain | 1.28e-09 | 9 |
collection of basal ganglia | 1.28e-09 | 9 |
cerebral subcortex | 1.28e-09 | 9 |
neural tube | 2.77e-09 | 56 |
neural rod | 2.77e-09 | 56 |
future spinal cord | 2.77e-09 | 56 |
neural keel | 2.77e-09 | 56 |
spinal cord | 1.97e-08 | 3 |
dorsal region element | 1.97e-08 | 3 |
dorsum | 1.97e-08 | 3 |
nervous system | 3.51e-07 | 89 |
regional part of telencephalon | 6.03e-07 | 32 |
regional part of forebrain | 7.03e-07 | 41 |
forebrain | 7.03e-07 | 41 |
anterior neural tube | 7.03e-07 | 41 |
future forebrain | 7.03e-07 | 41 |
putamen | 8.27e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 3.32e-07 | 1 |
myeloma | 3.32e-07 | 1 |