FFCP PHASE1:Hg19::chr10:115803417..115803428,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:115803417..115803428,- | |||
|coexpression_cluster_id=C73 | |||
|description=CAGE_peak_at_chr10:115803417..115803428,- | |||
|id=chr10:115803417..115803428,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;3.58e-26;1!UBERON:0005062;1.80e-07;4!UBERON:0007284;1.80e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;8.49e-50;2!DOID:178;7.62e-26;1!DOID:326;7.62e-26;1!DOID:3978;7.62e-26;1!DOID:3394;7.62e-26;1!DOID:5844;7.62e-26;1!DOID:1287;1.62e-25;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.80e-49,2;DOID:178,1.26e-25,1;DOID:326,1.26e-25,1;DOID:3978,1.26e-25,1;DOID:3394,1.26e-25,1;DOID:5844,1.26e-25,1;DOID:1287,2.36e-25,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.96e-34!115;UBERON:0001049!1.30e-26!57;UBERON:0005068!1.30e-26!57;UBERON:0006241!1.30e-26!57;UBERON:0007135!1.30e-26!57;UBERON:0002780!1.07e-25!41;UBERON:0001890!1.07e-25!41;UBERON:0006240!1.07e-25!41;UBERON:0003080!6.02e-25!42;UBERON:0002616!2.21e-23!59;UBERON:0002346!1.32e-22!90;UBERON:0002020!2.23e-21!34;UBERON:0003528!2.23e-21!34;UBERON:0001893!7.60e-21!34;UBERON:0003075!9.22e-21!86;UBERON:0007284!9.22e-21!86;UBERON:0000073!1.84e-20!94;UBERON:0001016!1.84e-20!94;UBERON:0005743!2.59e-20!86;UBERON:0001017!3.04e-20!82;UBERON:0000955!4.20e-20!69;UBERON:0006238!4.20e-20!69;UBERON:0002791!2.04e-19!33;UBERON:0003056!2.59e-18!61;UBERON:0001869!7.40e-18!32;UBERON:0002619!7.36e-16!22;UBERON:0001950!8.06e-15!20;UBERON:0000956!1.19e-13!25;UBERON:0000203!1.19e-13!25;UBERON:0000153!1.40e-12!129;UBERON:0007811!1.40e-12!129;UBERON:0000033!1.17e-11!123;UBERON:0000924!3.71e-11!173;UBERON:0006601!3.71e-11!173;UBERON:0000200!2.25e-10!6;UBERON:0004121!5.69e-10!169;UBERON:0002420!8.99e-10!9;UBERON:0007245!8.99e-10!9;UBERON:0010009!8.99e-10!9;UBERON:0010011!8.99e-10!9;UBERON:0000454!8.99e-10!9;UBERON:0002308!1.18e-09!9;UBERON:0000125!1.18e-09!9;UBERON:0002771!1.39e-08!3;UBERON:0006331!3.35e-08!3;UBERON:0001871!3.37e-08!7;UBERON:0001905!7.32e-07!2;UBERON:0002757!7.32e-07!2;UBERON:0010134!7.32e-07!2;UBERON:0002784!7.32e-07!2;UBERON:0005408!7.32e-07!2;UBERON:0001899!7.32e-07!2;UBERON:0000025!9.87e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;8.82e-51;2!UBERON:0002757;8.82e-51;2!UBERON:0010134;8.82e-51;2!UBERON:0005408;8.82e-51;2!UBERON:0001899;8.82e-51;2!UBERON:0002079;3.58e-26;1!UBERON:0003296;5.23e-26;4!UBERON:0010133;5.23e-26;4!UBERON:0002784;5.23e-26;4!UBERON:0002135;7.62e-26;1!UBERON:0007100;3.03e-16;25!UBERON:0001894;2.47e-15;7!UBERON:0002081;8.28e-14;2!UBERON:0002133;1.21e-13;2!UBERON:0004151;1.19e-09;3!UBERON:0003978;1.53e-09;3!UBERON:0000946;1.53e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,8.82e-51,2;UBERON:0002757,8.82e-51,2;UBERON:0010134,8.82e-51,2;UBERON:0005408,8.82e-51,2;UBERON:0001899,8.82e-51,2;UBERON:0002079,3.58e-26,1;UBERON:0003296,5.23e-26,4;UBERON:0010133,5.23e-26,4;UBERON:0002784,5.23e-26,4;UBERON:0002135,5.93e-26,1;UBERON:0001894,2.47e-15,7;UBERON:0006222,2.47e-15,7;UBERON:0007100,4.76e-15,27;UBERON:0002081,8.28e-14,2;UBERON:0010227,8.28e-14,2;UBERON:0002133,1.07e-13,2;UBERON:0007023,1.12e-10,114;UBERON:0004151,1.19e-09,3;UBERON:0003978,1.41e-09,3;UBERON:0009751,1.41e-09,3;UBERON:0000946,1.41e-09,3;UBERON:0002523,1.41e-09,3;UBERON:0005983,1.41e-09,3;UBERON:0002165,1.41e-09,3;UBERON:0002062,1.41e-09,3;UBERON:0007280,1.41e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0.556812347790485,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0.964771509003264,0,0,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0.182454789215666,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,1.39641200636127,0,0,1.19807400299395,1.28767814440971,0.223171457441873,0,0,0,0,0,0,0,0.169346664131569,0,0.953423842781029,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,2.1440859791201,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.66116300871345,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0.327872630709804,0.157054096250234,0,0.244052529803926,0.751145584238999,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0.211312123358627,0,0,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0,0.169732529954025,0,0.991486114072017,0.558644917973244,0,0.0788617450012534,0,0,0,0,0,0.478901577171454,0.41023272848151,0,0.138314504928436,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.0675375846183947,0,1.65349437200947,0.126831620387814,0,0.548257766857182,0,0,0,16.6067569122269,8.74337677768942,0,0,0,0,0,0,0.328863867814245,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0,0.0645889098360061,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p@chr10:115803417..115803428,- | |||
}} |
Latest revision as of 10:37, 23 July 2015
Short description: | p@chr10:115803417..115803428, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:115803417..115803428, - |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 8.82e-51 | 2 |
regional part of epithalamus | 8.82e-51 | 2 |
secretory circumventricular organ | 8.82e-51 | 2 |
circumventricular organ | 8.82e-51 | 2 |
epithalamus | 8.82e-51 | 2 |
left cardiac atrium | 3.58e-26 | 1 |
gland of diencephalon | 5.23e-26 | 4 |
neuroendocrine gland | 5.23e-26 | 4 |
regional part of diencephalon | 5.23e-26 | 4 |
mitral valve | 5.93e-26 | 1 |
diencephalon | 2.47e-15 | 7 |
future diencephalon | 2.47e-15 | 7 |
primary circulatory organ | 4.76e-15 | 27 |
cardiac atrium | 8.28e-14 | 2 |
future cardiac atrium | 8.28e-14 | 2 |
atrioventricular valve | 1.07e-13 | 2 |
adult organism | 1.12e-10 | 114 |
cardiac chamber | 1.19e-09 | 3 |
valve | 1.41e-09 | 3 |
cardiac mesenchyme | 1.41e-09 | 3 |
cardial valve | 1.41e-09 | 3 |
tunica intima | 1.41e-09 | 3 |
heart layer | 1.41e-09 | 3 |
endocardium | 1.41e-09 | 3 |
endocardial cushion | 1.41e-09 | 3 |
presumptive endocardium | 1.41e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.80e-49 | 2 |
vascular disease | 1.26e-25 | 1 |
ischemia | 1.26e-25 | 1 |
extrinsic cardiomyopathy | 1.26e-25 | 1 |
myocardial ischemia | 1.26e-25 | 1 |
myocardial infarction | 1.26e-25 | 1 |
cardiovascular system disease | 2.36e-25 | 4 |