FFCP PHASE1:Hg19::chr10:5075837..5075848,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:5075837..5075848,+ | |||
|coexpression_cluster_id=C326 | |||
|description=CAGE_peak_at_chr10:5075837..5075848,+ | |||
|id=chr10:5075837..5075848,+ | |||
|ontology_enrichment_celltype=CL:0002150!4.27e-10!3;CL:0000861!4.27e-10!3;CL:0000136!1.20e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000319;2.73e-29;1!CL:0000159;2.21e-15;2!CL:0000082;4.23e-14;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,4.20e-29,1;CL:0000159,2.74e-15,2;CL:0000082,4.14e-14,19 | |||
|ontology_enrichment_development_v019=UBERON:0001041;6.43e-24;30!UBERON:0009497;8.52e-10;13!UBERON:0008947;1.74e-09;29!UBERON:0006595;2.49e-07;86 | |||
|ontology_enrichment_disease=DOID:305!1.42e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:5662;1.15e-29;1!DOID:3030;2.73e-29;1!DOID:1324;1.20e-17;15!DOID:0050615;1.35e-16;16!DOID:5409;1.89e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,1.33e-29,1;DOID:3030,4.20e-29,1;DOID:1324,1.17e-17,15;DOID:0050615,1.32e-16,16;DOID:305,2.72e-13,106;DOID:0050687,6.71e-10,143;DOID:5409,1.82e-08,4;DOID:7,2.85e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.50e-22!9;UBERON:0008947!4.42e-10!38;UBERON:0003258!4.42e-10!38;UBERON:0001557!8.03e-10!19;UBERON:0000072!7.19e-08!46;UBERON:0001004!7.98e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;4.23e-14;19!UBERON:0000115;4.23e-14;19!UBERON:0002048;2.80e-12;22!UBERON:0004807;2.80e-12;22!UBERON:0000117;2.80e-12;22!UBERON:0000171;2.80e-12;22!UBERON:0000170;2.80e-12;22!UBERON:0002394;1.70e-08;4!UBERON:0003928;1.70e-08;4!UBERON:0003343;2.35e-08;4!UBERON:0004785;2.35e-08;4!UBERON:0005181;7.67e-08;35!UBERON:0005178;2.16e-07;34!UBERON:0002224;2.16e-07;34!UBERON:0005911;4.03e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,4.14e-14,19;UBERON:0000115,4.14e-14,19;UBERON:0002048,2.74e-12,22;UBERON:0000117,2.74e-12,22;UBERON:0000171,2.74e-12,22;UBERON:0000170,2.74e-12,22;UBERON:0005597,2.74e-12,22;UBERON:0000118,2.74e-12,22;UBERON:0004807,8.29e-10,28;UBERON:0005911,5.51e-09,82;UBERON:0001041,1.75e-08,87;UBERON:0003343,2.11e-08,4;UBERON:0004785,2.11e-08,4;UBERON:0005178,3.40e-08,34;UBERON:0002224,3.40e-08,34;UBERON:0005181,5.59e-08,35;UBERON:0005153,1.40e-07,37;UBERON:0008947,2.13e-07,38;UBERON:0003258,2.13e-07,38;UBERON:0001007,3.33e-07,145;UBERON:0001555,3.33e-07,145;UBERON:0007026,3.33e-07,145 | |||
|phase1_expression=0,0.642301571672949,0.422863212287913,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.55146986366197,0.435758888184812,0.474541238222193,0.404493924480493,0.588664395376038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307007349452259,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.54965641494388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387025325156341,0.0730893170861856,0.410577285266046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53978154095896,1.40963004463334,0,0,0,0,0,0,0,0.544017803369474,0.5013797880454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0.308801447160972,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,1.2288645437686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65157612686837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.42976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0.853425474875886,0,0,0,0,0,0,0,3.72722070728568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr10:5075837..5075848,+ | |||
}} |
Latest revision as of 14:01, 23 July 2015
Short description: | p@chr10:5075837..5075848, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:5075837..5075848, + |
Coexpression cluster: | C326_bile_choriocarcinoma_giant_lung_mucinous_glassy_malignant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 4.20e-29 | 1 |
seromucus secreting cell | 2.74e-15 | 2 |
epithelial cell of lung | 4.14e-14 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 4.14e-14 | 19 |
lung epithelium | 4.14e-14 | 19 |
lung | 2.74e-12 | 22 |
respiratory tube | 2.74e-12 | 22 |
respiration organ | 2.74e-12 | 22 |
pair of lungs | 2.74e-12 | 22 |
lung primordium | 2.74e-12 | 22 |
lung bud | 2.74e-12 | 22 |
respiratory system epithelium | 8.29e-10 | 28 |
endo-epithelium | 5.51e-09 | 82 |
foregut | 1.75e-08 | 87 |
mucosa of oral region | 2.11e-08 | 4 |
respiratory system mucosa | 2.11e-08 | 4 |
thoracic cavity element | 3.40e-08 | 34 |
thoracic cavity | 3.40e-08 | 34 |
thoracic segment organ | 5.59e-08 | 35 |
epithelial bud | 1.40e-07 | 37 |
respiratory primordium | 2.13e-07 | 38 |
endoderm of foregut | 2.13e-07 | 38 |
digestive system | 3.33e-07 | 145 |
digestive tract | 3.33e-07 | 145 |
primitive gut | 3.33e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 1.33e-29 | 1 |
mucinous adenocarcinoma | 4.20e-29 | 1 |
lung cancer | 1.17e-17 | 15 |
respiratory system cancer | 1.32e-16 | 16 |
carcinoma | 2.72e-13 | 106 |
cell type cancer | 6.71e-10 | 143 |
lung small cell carcinoma | 1.82e-08 | 4 |
disease of anatomical entity | 2.85e-07 | 39 |