FFCP PHASE1:Hg19::chr10:69455965..69455974,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29119 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2511 | |||
|TSSclassifier=strong | |||
|UniProt=A8K141,Q9UI47 | |||
|association_with_transcript=-16bp_to_NM_013266,uc001jmw.2_5end | |||
|cluster_id=chr10:69455965..69455974,- | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_6_at_CTNNA3_5end | |||
|id=chr10:69455965..69455974,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;7.47e-30;1!UBERON:0010227;2.05e-29;1!UBERON:0010226;2.05e-29;1!UBERON:0005062;2.18e-08;4!UBERON:0007284;2.18e-08;4 | |||
|ontology_enrichment_disease=DOID:114!4.16e-12!2;DOID:178!6.59e-07!1;DOID:326!6.59e-07!1;DOID:3978!6.59e-07!1;DOID:3394!6.59e-07!1;DOID:5844!6.59e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:114;6.35e-57;2!DOID:178;2.05e-29;1!DOID:326;2.05e-29;1!DOID:3978;2.05e-29;1!DOID:3394;2.05e-29;1!DOID:5844;2.05e-29;1!DOID:1287;4.21e-29;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.47e-57,2;DOID:178,1.78e-29,1;DOID:326,1.78e-29,1;DOID:3978,1.78e-29,1;DOID:3394,1.78e-29,1;DOID:5844,1.78e-29,1;DOID:1287,4.86e-29,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.49e-27!115;UBERON:0001896!2.43e-16!3;UBERON:0005290!2.43e-16!3;UBERON:0010096!2.43e-16!3;UBERON:0003076!6.30e-12!15;UBERON:0003057!6.30e-12!15;UBERON:0007100!8.56e-12!27;UBERON:0002298!1.86e-10!8;UBERON:0001155!1.10e-09!9;UBERON:0003103!9.42e-09!69;UBERON:0004151!2.01e-08!3;UBERON:0003978!3.31e-08!3;UBERON:0009751!3.31e-08!3;UBERON:0000946!3.31e-08!3;UBERON:0002523!3.31e-08!3;UBERON:0005983!3.31e-08!3;UBERON:0002165!3.31e-08!3;UBERON:0002062!3.31e-08!3;UBERON:0007280!3.31e-08!3;UBERON:0002240!4.87e-08!3;UBERON:0005409!5.21e-08!35;UBERON:0000059!6.20e-08!11;UBERON:0002106!2.11e-07!3;UBERON:0004854!2.11e-07!3;UBERON:0009034!2.11e-07!3;UBERON:0002095!2.11e-07!3;UBERON:0004782!2.11e-07!3;UBERON:0003281!2.11e-07!3;UBERON:0009664!2.11e-07!3;UBERON:0002296!2.11e-07!3;UBERON:0005602!2.11e-07!3;UBERON:0001179!2.11e-07!3;UBERON:0006293!2.11e-07!3;UBERON:0004733!5.34e-07!12;UBERON:0002028!5.34e-07!12;UBERON:0007277!5.34e-07!12;UBERON:0002084!5.90e-07!1;UBERON:0002082!5.90e-07!1;UBERON:0004706!5.90e-07!1;UBERON:0002079!6.23e-07!1;UBERON:0002146!6.96e-07!1;UBERON:0005623!6.96e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;9.79e-41;25!UBERON:0004151;2.18e-38;3!UBERON:0002084;2.05e-29;1!UBERON:0002079;2.05e-29;1!UBERON:0002146;2.05e-29;1!UBERON:0002082;2.05e-29;1!UBERON:0005623;2.05e-29;1!UBERON:0000948;4.49e-21;22!UBERON:0002081;1.91e-15;2!UBERON:0003978;9.43e-11;3!UBERON:0000946;9.43e-11;3!UBERON:0003103;2.43e-09;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.01e-38,3;UBERON:0007100,7.95e-38,27;UBERON:0002084,9.99e-30,1;UBERON:0002082,9.99e-30,1;UBERON:0010226,9.99e-30,1;UBERON:0002079,1.33e-29,1;UBERON:0002146,2.37e-29,1;UBERON:0005623,2.37e-29,1;UBERON:0000948,1.92e-19,24;UBERON:0005498,1.92e-19,24;UBERON:0004140,1.92e-19,24;UBERON:0009881,1.92e-19,24;UBERON:0004141,1.92e-19,24;UBERON:0003084,1.92e-19,24;UBERON:0007005,1.92e-19,24;UBERON:0004139,1.92e-19,24;UBERON:0004291,1.92e-19,24;UBERON:0002081,1.54e-15,2;UBERON:0010227,1.54e-15,2;UBERON:0003103,2.96e-15,68;UBERON:0003978,9.90e-11,3;UBERON:0009751,9.90e-11,3;UBERON:0000946,9.90e-11,3;UBERON:0002523,9.90e-11,3;UBERON:0005983,9.90e-11,3;UBERON:0002165,9.90e-11,3;UBERON:0002062,9.90e-11,3;UBERON:0007280,9.90e-11,3;UBERON:0001009,2.37e-09,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.558564802544508,1.3749625440701,0,1.39775300349294,1.28767814440971,0.446342914883745,2.5529719544956,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,1.42939065274673,1.98627591109629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.558867626472451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0.655678681511872,0,0.490296643507811,0,0.392616934229891,0.594092800654172,0,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p6@CTNNA3 | |||
}} |
Latest revision as of 22:07, 18 September 2015
Short description: | p6@CTNNA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CTNNA3_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | -16bp_to_NM_013266, uc001jmw.2_5end |
EntrezGene: | CTNNA3 |
HGNC: | 2511 |
UniProt: | A8K141Q9UI47 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 1.01e-38 | 3 |
primary circulatory organ | 7.95e-38 | 27 |
heart left ventricle | 9.99e-30 | 1 |
cardiac ventricle | 9.99e-30 | 1 |
future cardiac ventricle | 9.99e-30 | 1 |
left cardiac atrium | 1.33e-29 | 1 |
pulmonary valve | 2.37e-29 | 1 |
semi-lunar valve | 2.37e-29 | 1 |
heart | 1.92e-19 | 24 |
primitive heart tube | 1.92e-19 | 24 |
primary heart field | 1.92e-19 | 24 |
anterior lateral plate mesoderm | 1.92e-19 | 24 |
heart tube | 1.92e-19 | 24 |
heart primordium | 1.92e-19 | 24 |
cardiac mesoderm | 1.92e-19 | 24 |
cardiogenic plate | 1.92e-19 | 24 |
heart rudiment | 1.92e-19 | 24 |
cardiac atrium | 1.54e-15 | 2 |
future cardiac atrium | 1.54e-15 | 2 |
compound organ | 2.96e-15 | 68 |
valve | 9.90e-11 | 3 |
cardiac mesenchyme | 9.90e-11 | 3 |
cardial valve | 9.90e-11 | 3 |
tunica intima | 9.90e-11 | 3 |
heart layer | 9.90e-11 | 3 |
endocardium | 9.90e-11 | 3 |
endocardial cushion | 9.90e-11 | 3 |
presumptive endocardium | 9.90e-11 | 3 |
circulatory system | 2.37e-09 | 112 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.47e-57 | 2 |
vascular disease | 1.78e-29 | 1 |
ischemia | 1.78e-29 | 1 |
extrinsic cardiomyopathy | 1.78e-29 | 1 |
myocardial ischemia | 1.78e-29 | 1 |
myocardial infarction | 1.78e-29 | 1 |
cardiovascular system disease | 4.86e-29 | 4 |