FFCP PHASE1:Hg19::chr11:112047087..112047104,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83875 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18503 | |||
|TSSclassifier=strong | |||
|UniProt=E9PJJ1,Q8IUS0,Q9BYV7 | |||
|association_with_transcript=0bp_to_ENST00000526088,ENST00000532593,NM_001037290,uc001pnh.2,uc001pni.2,uc009yyn.2,uc010rwt.1_5end | |||
|cluster_id=chr11:112047087..112047104,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_4_at_BCO2_5end | |||
|id=chr11:112047087..112047104,+ | |||
|ontology_enrichment_celltype=CL:0002195!1.99e-11!2;CL:0002571!1.99e-11!2;CL:0002588!1.51e-10!2;CL:0002504!1.58e-07!3;CL:1000279!1.58e-07!3;CL:1000280!1.58e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002195;2.77e-08;2!CL:0002571;2.77e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,2.48e-08,2;CL:0002571,2.48e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0004140;8.63e-16;1!UBERON:0010226;1.16e-15;1!UBERON:0000358;1.44e-15;1!UBERON:0005062;1.99e-15;4!UBERON:0007284;1.99e-15;4!UBERON:0010227;2.06e-15;1!UBERON:0006242;2.95e-15;1 | |||
|ontology_enrichment_disease=DOID:114!7.75e-12!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.54e-29;2!DOID:178;1.78e-15;1!DOID:326;1.78e-15;1!DOID:3978;1.78e-15;1!DOID:3394;1.78e-15;1!DOID:5844;1.78e-15;1!DOID:1287;2.66e-15;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.44e-29,2;DOID:178,1.78e-15,1;DOID:326,1.78e-15,1;DOID:3978,1.78e-15,1;DOID:3394,1.78e-15,1;DOID:5844,1.78e-15,1;DOID:1287,2.56e-15,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.43e-11!27;UBERON:0003978!3.29e-08!3;UBERON:0009751!3.29e-08!3;UBERON:0000946!3.29e-08!3;UBERON:0002523!3.29e-08!3;UBERON:0005983!3.29e-08!3;UBERON:0002165!3.29e-08!3;UBERON:0002062!3.29e-08!3;UBERON:0007280!3.29e-08!3;UBERON:0004151!4.35e-08!3;UBERON:0000988!2.42e-07!3;UBERON:0002135!8.34e-07!1;UBERON:0002146!9.30e-07!1;UBERON:0005623!9.30e-07!1;UBERON:0002084!9.81e-07!1;UBERON:0002082!9.81e-07!1;UBERON:0004706!9.81e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;6.28e-36;25!UBERON:0003978;3.16e-20;3!UBERON:0000946;3.16e-20;3!UBERON:0004151;7.16e-20;3!UBERON:0000948;2.71e-16;22!UBERON:0002135;6.93e-16;1!UBERON:0002146;9.99e-16;1!UBERON:0005623;9.99e-16;1!UBERON:0002084;1.16e-15;1!UBERON:0002082;1.16e-15;1!UBERON:0002079;2.06e-15;1!UBERON:0002133;1.34e-08;2!UBERON:0002081;2.31e-08;2!UBERON:0003103;2.67e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.14e-33,27;UBERON:0003978,3.32e-20,3;UBERON:0009751,3.32e-20,3;UBERON:0000946,3.32e-20,3;UBERON:0002523,3.32e-20,3;UBERON:0005983,3.32e-20,3;UBERON:0002165,3.32e-20,3;UBERON:0002062,3.32e-20,3;UBERON:0007280,3.32e-20,3;UBERON:0004151,7.16e-20,3;UBERON:0002135,7.46e-16,1;UBERON:0002146,9.99e-16,1;UBERON:0005623,9.99e-16,1;UBERON:0002084,1.16e-15,1;UBERON:0002082,1.16e-15,1;UBERON:0010226,1.16e-15,1;UBERON:0002079,2.06e-15,1;UBERON:0000948,6.22e-15,24;UBERON:0005498,6.22e-15,24;UBERON:0004140,6.22e-15,24;UBERON:0009881,6.22e-15,24;UBERON:0004141,6.22e-15,24;UBERON:0003084,6.22e-15,24;UBERON:0007005,6.22e-15,24;UBERON:0004139,6.22e-15,24;UBERON:0004291,6.22e-15,24;UBERON:0003103,8.12e-13,68;UBERON:0004797,3.30e-09,7;UBERON:0002133,1.39e-08,2;UBERON:0002081,2.31e-08,2;UBERON:0010227,2.31e-08,2;UBERON:0001009,1.74e-07,112;UBERON:0007023,2.67e-07,114;UBERON:0003914,4.94e-07,117 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85871391755592,1.62786481617433,0,0,0.710783897485092,0,0.904318131178758,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5677080572514,6.64565229633883,0,3.39454300848285,12.8767814440971,13.3902874465124,7.25581502856644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1440859791201,5.29673576292345,0,0,0,0.326587360109409,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0.926404341482917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0,0,4.76589844009314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69281884806909,0.122241444182866,0,0,0,0 | |||
|short_description=p4@BCO2 | |||
}} |
Latest revision as of 05:19, 25 September 2015
Short description: | p4@BCO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BCO2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000526088, ENST00000532593, NM_001037290, uc001pnh.2, uc001pni.2, uc009yyn.2, uc010rwt.1_5end |
EntrezGene: | BCO2 |
HGNC: | 18503 |
UniProt: | E9PJJ1Q8IUS0Q9BYV7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 2.48e-08 | 2 |
hepatic mesenchymal stem cell | 2.48e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 3.14e-33 | 27 |
valve | 3.32e-20 | 3 |
cardiac mesenchyme | 3.32e-20 | 3 |
cardial valve | 3.32e-20 | 3 |
tunica intima | 3.32e-20 | 3 |
heart layer | 3.32e-20 | 3 |
endocardium | 3.32e-20 | 3 |
endocardial cushion | 3.32e-20 | 3 |
presumptive endocardium | 3.32e-20 | 3 |
cardiac chamber | 7.16e-20 | 3 |
mitral valve | 7.46e-16 | 1 |
pulmonary valve | 9.99e-16 | 1 |
semi-lunar valve | 9.99e-16 | 1 |
heart left ventricle | 1.16e-15 | 1 |
cardiac ventricle | 1.16e-15 | 1 |
future cardiac ventricle | 1.16e-15 | 1 |
left cardiac atrium | 2.06e-15 | 1 |
heart | 6.22e-15 | 24 |
primitive heart tube | 6.22e-15 | 24 |
primary heart field | 6.22e-15 | 24 |
anterior lateral plate mesoderm | 6.22e-15 | 24 |
heart tube | 6.22e-15 | 24 |
heart primordium | 6.22e-15 | 24 |
cardiac mesoderm | 6.22e-15 | 24 |
cardiogenic plate | 6.22e-15 | 24 |
heart rudiment | 6.22e-15 | 24 |
compound organ | 8.12e-13 | 68 |
blood vessel layer | 3.30e-09 | 7 |
atrioventricular valve | 1.39e-08 | 2 |
cardiac atrium | 2.31e-08 | 2 |
future cardiac atrium | 2.31e-08 | 2 |
circulatory system | 1.74e-07 | 112 |
adult organism | 2.67e-07 | 114 |
epithelial tube | 4.94e-07 | 117 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.44e-29 | 2 |
vascular disease | 1.78e-15 | 1 |
ischemia | 1.78e-15 | 1 |
extrinsic cardiomyopathy | 1.78e-15 | 1 |
myocardial ischemia | 1.78e-15 | 1 |
myocardial infarction | 1.78e-15 | 1 |
cardiovascular system disease | 2.56e-15 | 4 |