FFCP PHASE1:Hg19::chr11:66036082..66036125,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81876 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18370 | |||
|TSSclassifier=strong | |||
|UniProt=E7EWA5 | |||
|association_with_transcript=0bp_to_ENST00000314965_5end | |||
|cluster_id=chr11:66036082..66036125,+ | |||
|coexpression_cluster_id=C2155 | |||
|description=CAGE_peak_1_at_RAB1B_5end | |||
|id=chr11:66036082..66036125,+ | |||
|ontology_enrichment_celltype=CL:0002371!7.90e-25!591;CL:0000222!2.87e-21!119;CL:0000144!1.45e-19!625;CL:0000220!2.10e-18!246;CL:0000548!6.93e-18!679;CL:0000004!6.93e-18!679;CL:0000255!6.93e-18!679;CL:0002321!1.51e-17!248;CL:0000012!5.98e-17!682;CL:0000192!1.57e-15!42;CL:0000514!1.57e-15!42;CL:0000183!2.75e-15!59;CL:0000003!1.45e-14!722;CL:0000359!3.86e-14!32;CL:0000115!1.12e-13!35;CL:0000680!2.09e-13!57;CL:0000056!2.09e-13!57;CL:0000355!2.09e-13!57;CL:0000187!6.10e-13!54;CL:0000055!9.32e-13!180;CL:0002078!2.11e-11!44;CL:0002139!1.02e-10!24;CL:0000393!1.28e-09!60;CL:0000211!1.28e-09!60;CL:0000063!1.98e-09!578;CL:0000213!9.65e-09!57;CL:0000215!9.65e-09!57;CL:0000071!1.03e-08!18;CL:0002546!1.03e-08!18;CL:0000066!4.77e-08!254;CL:0000076!2.65e-07!62;CL:1000449!3.35e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.04e-13;32!CL:0000115;6.12e-12;36!CL:0000192;3.67e-11;43!CL:0002139;1.05e-10;24!CL:0000071;1.07e-08;18!CL:0002078;2.53e-08;45!CL:1000449;9.50e-08;15!CL:0000187;4.48e-07;55!CL:0000134;8.92e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.89e-21,121;CL:0002321,8.80e-18,250;CL:0000192,4.52e-15,43;CL:0000514,4.52e-15,43;CL:0000115,3.85e-14,36;CL:0000359,3.86e-14,32;CL:0000680,4.27e-13,58;CL:0000056,4.27e-13,58;CL:0000355,4.27e-13,58;CL:0000187,1.26e-12,55;CL:0002078,7.81e-12,45;CL:0002139,1.02e-10,24;CL:0000393,2.13e-09,61;CL:0000211,2.13e-09,61;CL:0000213,4.10e-09,58;CL:0000215,4.10e-09,58;CL:0000071,1.03e-08,18;CL:0002546,1.03e-08,18;CL:0000066,4.09e-08,253;CL:1000449,9.70e-08,15;CL:0000076,1.39e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000514;3.67e-11;43!CL:0002546;1.07e-08;18!CL:0000355;4.19e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.29e-22!79;UBERON:0007798!1.29e-22!79;UBERON:0000055!3.85e-21!69;UBERON:0001009!3.82e-20!113;UBERON:0004535!4.24e-20!110;UBERON:0004872!1.32e-19!84;UBERON:0001981!1.29e-18!60;UBERON:0007500!1.29e-18!60;UBERON:0004537!1.29e-18!60;UBERON:0006965!1.29e-18!60;UBERON:0003914!3.58e-18!118;UBERON:0001637!5.78e-17!42;UBERON:0003509!5.78e-17!42;UBERON:0004572!5.78e-17!42;UBERON:0000486!1.23e-14!82;UBERON:0000914!1.28e-14!83;UBERON:0002329!1.28e-14!83;UBERON:0003077!1.28e-14!83;UBERON:0003059!1.28e-14!83;UBERON:0007282!1.28e-14!83;UBERON:0009618!1.28e-14!83;UBERON:0007285!1.28e-14!83;UBERON:0005256!1.76e-14!143;UBERON:0004290!4.28e-14!70;UBERON:0000490!1.02e-13!138;UBERON:0003081!4.29e-13!216;UBERON:0004573!1.05e-12!33;UBERON:0004571!1.05e-12!33;UBERON:0001134!2.09e-12!61;UBERON:0002036!2.09e-12!61;UBERON:0003082!2.09e-12!61;UBERON:0002385!2.26e-12!63;UBERON:0001015!2.26e-12!63;UBERON:0000383!2.26e-12!63;UBERON:0000926!4.05e-11!448;UBERON:0004120!4.05e-11!448;UBERON:0006603!4.05e-11!448;UBERON:0002100!1.21e-10!216;UBERON:0000467!5.55e-09!625;UBERON:0000119!5.99e-09!312;UBERON:0000468!6.36e-09!659;UBERON:0000480!8.59e-09!626;UBERON:0001986!1.03e-08!18;UBERON:0004638!1.03e-08!18;UBERON:0004852!1.03e-08!18;UBERON:0000487!1.72e-08!22;UBERON:0000483!2.20e-08!309;UBERON:0006914!2.56e-07!25;UBERON:0004111!2.96e-07!241;UBERON:0000947!3.32e-07!21;UBERON:0010191!3.32e-07!21;UBERON:0004211!3.35e-07!16;UBERON:0001285!3.35e-07!16;UBERON:0007684!3.35e-07!16;UBERON:0003220!3.35e-07!16;UBERON:0004208!3.35e-07!16;UBERON:0000477!6.86e-07!286;UBERON:0003102!9.38e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;4.13e-12;56!UBERON:0001981;4.13e-12;56!UBERON:0004537;4.13e-12;56!UBERON:0001637;5.77e-12;42!UBERON:0003509;5.77e-12;42!UBERON:0004572;5.77e-12;42!UBERON:0003914;5.79e-12;74!UBERON:0004573;1.32e-11;33!UBERON:0004571;1.32e-11;33!UBERON:0000055;1.80e-11;65!UBERON:0002049;2.21e-10;75!UBERON:0007798;2.21e-10;75!UBERON:0004638;1.07e-08;18!UBERON:0001986;1.07e-08;18!UBERON:0004852;1.07e-08;18!UBERON:0000487;1.81e-08;22!UBERON:0006555;9.50e-08;15!UBERON:0004819;9.50e-08;15!UBERON:0001285;9.50e-08;15!UBERON:0007684;9.50e-08;15!UBERON:0000025;1.13e-07;93!UBERON:0006914;2.67e-07;25!UBERON:0000947;3.30e-07;21!UBERON:0010191;3.30e-07;21!UBERON:0000353;3.74e-07;15 | |||
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| |||
|short_description=p1@RAB1B | |||
}} |
Latest revision as of 13:26, 19 September 2015
Short description: | p1@RAB1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAB1B_5end |
Coexpression cluster: | C2155_Alveolar_Mesenchymal_Renal_Hair_Smooth_Fibroblast_Bronchial |
Association with transcript: | 0bp_to_ENST00000314965_5end |
EntrezGene: | RAB1B |
HGNC: | 18370 |
UniProt: | E7EWA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.89e-21 | 121 |
embryonic cell | 8.80e-18 | 250 |
smooth muscle cell | 4.52e-15 | 43 |
smooth muscle myoblast | 4.52e-15 | 43 |
endothelial cell | 3.85e-14 | 36 |
vascular associated smooth muscle cell | 3.86e-14 | 32 |
muscle precursor cell | 4.27e-13 | 58 |
myoblast | 4.27e-13 | 58 |
multi-potent skeletal muscle stem cell | 4.27e-13 | 58 |
muscle cell | 1.26e-12 | 55 |
meso-epithelial cell | 7.81e-12 | 45 |
endothelial cell of vascular tree | 1.02e-10 | 24 |
electrically responsive cell | 2.13e-09 | 61 |
electrically active cell | 2.13e-09 | 61 |
lining cell | 4.10e-09 | 58 |
barrier cell | 4.10e-09 | 58 |
blood vessel endothelial cell | 1.03e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.03e-08 | 18 |
epithelial cell | 4.09e-08 | 253 |
epithelial cell of nephron | 9.70e-08 | 15 |
squamous epithelial cell | 1.39e-07 | 63 |