FFCP PHASE1:Hg19::chr8:12809591..12809598,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:12809591..12809598,+
|short_description=p13@KIAA1456
|description=CAGE_peak_13_at_KIAA1456_5end
|association_with_transcript=440bp_to_ENST00000528753_5end
...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57604 | |EntrezGene=57604 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26725 | |HGNC=26725 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=440bp_to_ENST00000528753_5end | |||
|cluster_id=chr8:12809591..12809598,+ | |||
|coexpression_cluster_id=C2916 | |||
|description=CAGE_peak_13_at_KIAA1456_5end | |||
|id=chr8:12809591..12809598,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.43e-60;3 | |||
|ontology_enrichment_disease=DOID:171!3.93e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:171;2.47e-18;10!DOID:3095;1.08e-08;22!DOID:2994;1.08e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.47e-18,10;DOID:3095,1.08e-08,22;DOID:2994,1.08e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.29e-37!57;UBERON:0005068!4.29e-37!57;UBERON:0006241!4.29e-37!57;UBERON:0007135!4.29e-37!57;UBERON:0002346!9.61e-36!90;UBERON:0007023!4.77e-34!115;UBERON:0000073!1.05e-30!94;UBERON:0001016!1.05e-30!94;UBERON:0002616!1.13e-30!59;UBERON:0005743!1.30e-30!86;UBERON:0001017!2.12e-30!82;UBERON:0003075!4.86e-29!86;UBERON:0007284!4.86e-29!86;UBERON:0000955!8.74e-29!69;UBERON:0006238!8.74e-29!69;UBERON:0002780!1.46e-25!41;UBERON:0001890!1.46e-25!41;UBERON:0006240!1.46e-25!41;UBERON:0003080!8.00e-25!42;UBERON:0001893!7.07e-23!34;UBERON:0001869!6.34e-22!32;UBERON:0002791!3.32e-21!33;UBERON:0002020!2.18e-20!34;UBERON:0003528!2.18e-20!34;UBERON:0000924!6.08e-20!173;UBERON:0006601!6.08e-20!173;UBERON:0003056!8.50e-19!61;UBERON:0000153!1.21e-18!129;UBERON:0007811!1.21e-18!129;UBERON:0000033!2.49e-17!123;UBERON:0004121!7.38e-16!169;UBERON:0002619!1.78e-14!22;UBERON:0001950!1.76e-13!20;UBERON:0003076!1.82e-13!15;UBERON:0003057!1.82e-13!15;UBERON:0000956!1.77e-12!25;UBERON:0000203!1.77e-12!25;UBERON:0000369!2.78e-11!4;UBERON:0002435!2.78e-11!4;UBERON:0000204!2.78e-11!4;UBERON:0010082!2.78e-11!4;UBERON:0004733!1.12e-10!12;UBERON:0002028!1.12e-10!12;UBERON:0007277!1.12e-10!12;UBERON:0002420!4.17e-10!9;UBERON:0007245!4.17e-10!9;UBERON:0010009!4.17e-10!9;UBERON:0010011!4.17e-10!9;UBERON:0000454!4.17e-10!9;UBERON:0002308!4.54e-10!9;UBERON:0000125!4.54e-10!9;UBERON:0004732!9.15e-10!13;UBERON:0009663!1.86e-09!7;UBERON:0005383!2.24e-09!3;UBERON:0005382!2.24e-09!3;UBERON:0000025!1.44e-08!194;UBERON:0002680!1.11e-07!9;UBERON:0001895!1.11e-07!9;UBERON:0010092!1.11e-07!9;UBERON:0001905!2.89e-07!2;UBERON:0002757!2.89e-07!2;UBERON:0010134!2.89e-07!2;UBERON:0002784!2.89e-07!2;UBERON:0005408!2.89e-07!2;UBERON:0001899!2.89e-07!2;UBERON:0000200!5.03e-07!6;UBERON:0001873!7.47e-07!2;UBERON:0010122!7.47e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.39e-44;4!UBERON:0000923;1.39e-44;4!UBERON:0010316;1.39e-44;4!UBERON:0005291;1.39e-44;4!UBERON:0001905;7.33e-41;2!UBERON:0002757;7.33e-41;2!UBERON:0010134;7.33e-41;2!UBERON:0005408;7.33e-41;2!UBERON:0001899;7.33e-41;2!UBERON:0002050;7.52e-36;5!UBERON:0005423;7.52e-36;5!UBERON:0002037;1.25e-30;6!UBERON:0003296;5.17e-21;4!UBERON:0010133;5.17e-21;4!UBERON:0002784;5.17e-21;4!UBERON:0002680;1.09e-20;9!UBERON:0001895;1.09e-20;9!UBERON:0004733;1.06e-15;12!UBERON:0002028;1.06e-15;12!UBERON:0004732;1.51e-14;13!UBERON:0001894;1.89e-12;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.99e-41,2;UBERON:0002757,5.99e-41,2;UBERON:0010134,5.99e-41,2;UBERON:0005408,5.99e-41,2;UBERON:0001899,5.99e-41,2;UBERON:0002037,1.38e-30,6;UBERON:0006215,1.38e-30,6;UBERON:0003296,4.68e-21,4;UBERON:0010133,4.68e-21,4;UBERON:0002784,4.68e-21,4;UBERON:0002680,1.16e-20,9;UBERON:0001895,1.16e-20,9;UBERON:0010092,1.16e-20,9;UBERON:0004733,1.11e-15,12;UBERON:0002028,1.11e-15,12;UBERON:0007277,1.11e-15,12;UBERON:0004732,1.58e-14,13;UBERON:0002346,2.66e-14,86;UBERON:0003076,1.11e-12,15;UBERON:0003057,1.11e-12,15;UBERON:0001894,1.78e-12,7;UBERON:0006222,1.78e-12,7;UBERON:0000073,2.04e-09,53;UBERON:0002616,2.04e-09,53;UBERON:0001049,6.33e-09,56;UBERON:0005068,6.33e-09,56;UBERON:0006241,6.33e-09,56;UBERON:0007135,6.33e-09,56;UBERON:0000955,2.82e-07,68;UBERON:0006238,2.82e-07,68;UBERON:0004121,6.15e-07,171;UBERON:0000924,6.15e-07,171;UBERON:0006601,6.15e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,1.45802306691627,0.347249989866585,0.885741385813839,0.482385754501632,9.15490417902499,6.08185929621735,4.43321428430321,0.219385397153973,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.50648636764703,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.665574309221114,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786329709279482,0,0.33946505990805,3.82634856183029,1.85903646388503,0.558644917973244,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0.615349092722265,0,0.553258019713743,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.697573912132975,0,0,0,1.05522746615772,0,6.42842203053944,6.72567444437648,0,0,0.0887023701626388,0,0,0.135939465953663,0.263091094251396,0.118193840883968,0,0,0.471346769748006,0,0,0,0,0.571812353413251,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,1.39265542612958,0,0,0.109940516745429,0,0.0771741581079447,0.218559560503957,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0.436350690340377,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0.20686599172379,0.213233981900981,0.952257725854961,0,0,0,0.763765899337979,0.606351566874658,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,1.45802306691627,0.347249989866585,0.885741385813839,0.482385754501632,9.15490417902499,6.08185929621735,4.43321428430321,0.219385397153973,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.50648636764703,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.665574309221114,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786329709279482,0,0.33946505990805,3.82634856183029,1.85903646388503,0.558644917973244,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0.615349092722265,0,0.553258019713743,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.697573912132975,0,0,0,1.05522746615772,0,6.42842203053944,6.72567444437648,0,0,0.0887023701626388,0,0,0.135939465953663,0.263091094251396,0.118193840883968,0,0,0.471346769748006,0,0,0,0,0.571812353413251,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,1.39265542612958,0,0,0.109940516745429,0,0.0771741581079447,0.218559560503957,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0.436350690340377,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0.20686599172379,0.213233981900981,0.952257725854961,0,0,0,0.763765899337979,0.606351566874658,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,0.402547587182052,0 | ||
|short_description=p13@KIAA1456 | |||
}} | }} |
Latest revision as of 05:02, 16 September 2015
Short description: | p13@KIAA1456 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_KIAA1456_5end |
Coexpression cluster: | C2916_pineal_neuroectodermal_cerebellum_small_neuroepithelioma_thyroid_neuroblastoma |
Association with transcript: | 440bp_to_ENST00000528753_5end |
EntrezGene: | KIAA1456 |
HGNC: | 26725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 5.99e-41 | 2 |
regional part of epithalamus | 5.99e-41 | 2 |
secretory circumventricular organ | 5.99e-41 | 2 |
circumventricular organ | 5.99e-41 | 2 |
epithalamus | 5.99e-41 | 2 |
cerebellum | 1.38e-30 | 6 |
rhombic lip | 1.38e-30 | 6 |
gland of diencephalon | 4.68e-21 | 4 |
neuroendocrine gland | 4.68e-21 | 4 |
regional part of diencephalon | 4.68e-21 | 4 |
regional part of metencephalon | 1.16e-20 | 9 |
metencephalon | 1.16e-20 | 9 |
future metencephalon | 1.16e-20 | 9 |
segmental subdivision of hindbrain | 1.11e-15 | 12 |
hindbrain | 1.11e-15 | 12 |
presumptive hindbrain | 1.11e-15 | 12 |
segmental subdivision of nervous system | 1.58e-14 | 13 |
neurectoderm | 2.66e-14 | 86 |
posterior neural tube | 1.11e-12 | 15 |
chordal neural plate | 1.11e-12 | 15 |
diencephalon | 1.78e-12 | 7 |
future diencephalon | 1.78e-12 | 7 |
regional part of nervous system | 2.04e-09 | 53 |
regional part of brain | 2.04e-09 | 53 |
neural tube | 6.33e-09 | 56 |
neural rod | 6.33e-09 | 56 |
future spinal cord | 6.33e-09 | 56 |
neural keel | 6.33e-09 | 56 |
brain | 2.82e-07 | 68 |
future brain | 2.82e-07 | 68 |
ectoderm-derived structure | 6.15e-07 | 171 |
ectoderm | 6.15e-07 | 171 |
presumptive ectoderm | 6.15e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.47e-18 | 10 |
germ cell and embryonal cancer | 1.08e-08 | 22 |
germ cell cancer | 1.08e-08 | 22 |