FFCP PHASE1:Hg19::chr12:122296899..122296936,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3242 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5147 | |||
|TSSclassifier=strong | |||
|UniProt=P32754 | |||
|association_with_transcript=-130bp_to_NM_002150,uc001ubj.2_5end | |||
|cluster_id=chr12:122296899..122296936,- | |||
|description=CAGE_peak_2_at_HPD_5end | |||
|id=chr12:122296899..122296936,- | |||
|ontology_enrichment_celltype=CL:0000136!1.10e-07!15;CL:0000128!9.64e-07!7;CL:0000126!9.64e-07!7;CL:0000127!9.64e-07!7;CL:0002453!9.64e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.49e-16;13!CL:0000182;2.39e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.23e-14,15;CL:0000182,1.58e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.63e-07;4!UBERON:0007284;1.63e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.24e-22!115;UBERON:0000481!3.18e-11!347;UBERON:0000475!1.40e-09!365;UBERON:0000477!5.25e-08!286;UBERON:0003075!1.24e-07!86;UBERON:0007284!1.24e-07!86;UBERON:0002385!2.37e-07!63;UBERON:0001015!2.37e-07!63;UBERON:0000383!2.37e-07!63;UBERON:0005743!3.58e-07!86;UBERON:0000468!7.51e-07!659;UBERON:0002346!7.77e-07!90;UBERON:0000483!8.34e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.89e-13;19!UBERON:0006925;2.89e-13;19!UBERON:0003978;6.55e-10;3!UBERON:0000946;6.55e-10;3!UBERON:0002423;1.40e-09;25!UBERON:0001896;4.23e-09;3!UBERON:0005290;4.23e-09;3!UBERON:0005406;1.50e-07;2!UBERON:0002133;4.22e-07;2!UBERON:0002365;4.71e-07;31!UBERON:0002330;4.71e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.03e-13,19;UBERON:0006925,2.03e-13,19;UBERON:0008836,2.03e-13,19;UBERON:0008835,2.68e-11,22;UBERON:0003894,2.68e-11,22;UBERON:0009854,1.03e-10,23;UBERON:0003978,6.69e-10,3;UBERON:0009751,6.69e-10,3;UBERON:0000946,6.69e-10,3;UBERON:0002523,6.69e-10,3;UBERON:0005983,6.69e-10,3;UBERON:0002165,6.69e-10,3;UBERON:0002062,6.69e-10,3;UBERON:0007280,6.69e-10,3;UBERON:0007499,1.09e-09,25;UBERON:0009497,1.09e-09,25;UBERON:0000015,1.09e-09,25;UBERON:0002423,1.09e-09,25;UBERON:0006235,1.09e-09,25;UBERON:0004161,1.09e-09,25;UBERON:0009856,3.07e-09,26;UBERON:0001896,3.30e-09,3;UBERON:0005290,3.30e-09,3;UBERON:0010096,3.30e-09,3;UBERON:0007023,3.23e-08,114;UBERON:0005406,1.58e-07,2;UBERON:0002365,2.01e-07,31;UBERON:0002330,2.01e-07,31;UBERON:0002133,4.05e-07,2;UBERON:0003104,7.27e-07,160;UBERON:0009142,7.27e-07,160 | |||
|phase1_expression=1.2717486548939,1.92690471501885,1.40954404095971,0,4.02264984984559,4.36169262050184,0,0.631719873426831,1.56711376919903,0,0,0,0,1.36142988256051,2.65117900582333,0.672325146451775,0,0,0,0.61560529038394,0.816002764977012,1.25381888591235,0.286235987131057,1.36874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.511450247374121,0.361439152384566,7.52006865953834,7.38717246700201,0,0.973269740605272,0.283604451492204,0,0.087834785693126,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0.354668382198357,0,0,0.24666754841716,1.55605517699883,0,0.326923806226917,0.605429710579726,0,0.234321431833797,0,0,0,0.117434498643765,0,0,2.24569588380383,0,2.37649296704261,0,0.247266929278557,0,3.59309070908119,0,0.250237039743928,0.554128230968366,0,0,0.150238058906597,0.226864366320042,0,0,0,0,0.103052529238439,0,0.37223371266318,0.168776332241266,0.194874010322397,0,0.368199594569197,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0.354920400119532,0,0,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0,0,3.80265104465493,1.96565443335525,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,1.42977993658148,4.88359444852299,0,0.65147236858747,1.42156779497018,0,0.301439377059586,0,0.799783929456456,0,0,0,0.239624855491583,1.14861935834114,0,0.289562613335158,0.410952645100767,1.07436577943937,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,1.59498939234882,0,0,0,0.178428988797162,0,0.585707074963566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0.561320188866147,0.384417447767103,0,0.160853921143607,7.42090332224955,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,1.44257416306811,0,0,0,0,0,0,0.616194468458578,0.614014698904518,0.137836572484531,1.07420244868274,0.870100163485371,0.0852266274161009,0,0,0,0,0,0.929691098594572,0.31481234683064,0,0.308033580176089,0,0,0.55597265731176,0.286249773483982,0,0.316379424718726,0.762520775695299,0.511795582622668,0.42793898803392,0,0,0.179872457583315,1.09814811894422,0.706874414074119,0,0,0,0.975267478179181,0,0,0,0.141405431953713,0,0,0.66343897524122,0,4.6302042741335,0,0,0,0,0.143411352204052,0.294747123039363,0,0,2.53329162357197,0.658589785919804,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,3.58646378851925,0.276283915531148,0,1.1249555075237,0,0,0,0,0,2.46608514092334,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0.87754158861589,6.10055395706345,0,1.07730361905316,0.683652335082007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.265372693510018,0,0,0,0,0.404406797884062,1.60515529459758,0,0,0,0,0.394584402849391,0,0,2.46427660551103,0,0,0,0,0,0,0.853828638089378,0,0,0,0,0.34945333648406,0,0.19351266257817,0.0730893170861856,0.164230914106418,0.581934098930517,0,0.90392296312213,0,0,0.0633107959558787,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,3.0721064139948,3.43740636017525,2.87149209830726,0.599037001496973,2.14613024068285,1.11585728720936,0.0671834724867263,0,0,2.91497774536727,3.54388191039016,2.89835238572995,0,0,0,0.544813624446302,0,0,0,0,0,0,0,1.57611414598396,0.209818352539992,0,0,0,0,0.662091970365432,0,0.542999601753713,0,0.326587360109409,0,0,0.511164065356265,0,3.22414914091781,1.32506888912221,0,0.39669780522807,0,0,1.28144895081234,0,0,1.48849806543585,0,0,0,1.63205341010842,2.7575888342497,3.67614692116154,0.327872630709804,0,0,0,0,3.44045517414043,1.88579387612649,1.36612086471044,0.138348634936231,0,0,0,0,0,0,0,0.233713309847224,0,0.568209015825267,0.754703705257725,0.889811221596536,0.457680136793847,0.302461847526478,0,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53498834705095,0,0,0.168942440653073,0,0,0,0,0,0,0,0.327609848846413,2.70350199629091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,1.65462722368366,0,2.34454203369928,0,0,0,0.0675375846183947,0.781078098613847,0,0.0634158101939068,0,0,1.98484471355718,0,0,0.535701835878287,0.672567444437648,0,0.227662191351298,0.0887023701626388,0,0,0.135939465953663,0.197318320688547,0,0,2.11931350696388,0,0,0,0.215927591218621,0,5.50369390160254,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0.513314034281235,0,0,0,0,0,0,0,0,0.231522474323834,0,0,1.96118657403124,0,0.196308467114945,0.594092800654172,0,0,0.657887425858975,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,2.23197010900051,4.62175628631418,0,0.2523328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| |||
|short_description=p2@HPD | |||
}} |
Latest revision as of 23:14, 16 September 2015
Short description: | p2@HPD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HPD_5end |
Coexpression cluster: | NA |
Association with transcript: | -130bp_to_NM_002150, uc001ubj.2_5end |
EntrezGene: | HPD |
HGNC: | 5147 |
UniProt: | P32754 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.23e-14 | 15 |
hepatocyte | 1.58e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.03e-13 | 19 |
digestive gland | 2.03e-13 | 19 |
liver bud | 2.03e-13 | 19 |
hepatic diverticulum | 2.68e-11 | 22 |
liver primordium | 2.68e-11 | 22 |
digestive tract diverticulum | 1.03e-10 | 23 |
valve | 6.69e-10 | 3 |
cardiac mesenchyme | 6.69e-10 | 3 |
cardial valve | 6.69e-10 | 3 |
tunica intima | 6.69e-10 | 3 |
heart layer | 6.69e-10 | 3 |
endocardium | 6.69e-10 | 3 |
endocardial cushion | 6.69e-10 | 3 |
presumptive endocardium | 6.69e-10 | 3 |
epithelial sac | 1.09e-09 | 25 |
epithelium of foregut-midgut junction | 1.09e-09 | 25 |
anatomical boundary | 1.09e-09 | 25 |
hepatobiliary system | 1.09e-09 | 25 |
foregut-midgut junction | 1.09e-09 | 25 |
septum transversum | 1.09e-09 | 25 |
sac | 3.07e-09 | 26 |
medulla oblongata | 3.30e-09 | 3 |
myelencephalon | 3.30e-09 | 3 |
future myelencephalon | 3.30e-09 | 3 |
adult organism | 3.23e-08 | 114 |
perirenal fat | 1.58e-07 | 2 |
exocrine gland | 2.01e-07 | 31 |
exocrine system | 2.01e-07 | 31 |
atrioventricular valve | 4.05e-07 | 2 |
mesenchyme | 7.27e-07 | 160 |
entire embryonic mesenchyme | 7.27e-07 | 160 |