FFCP PHASE1:Hg19::chr12:825753..825767,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:825753..825767,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_at_chr12:825753..825767,- | |||
|id=chr12:825753..825767,- | |||
|ontology_enrichment_celltype=CL:0000946!1.01e-07!1;CL:0000786!1.01e-07!1;CL:0000980!1.01e-07!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;2.78e-26;1!UBERON:0000358;4.61e-26;1!UBERON:0005062;1.18e-25;4!UBERON:0007284;1.18e-25;4 | |||
|ontology_enrichment_disease=DOID:114!2.22e-14!2;DOID:178!5.58e-08!1;DOID:326!5.58e-08!1;DOID:3978!5.58e-08!1;DOID:3394!5.58e-08!1;DOID:5844!5.58e-08!1;DOID:1287!1.31e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:114;2.75e-50;2!DOID:178;8.64e-26;1!DOID:326;8.64e-26;1!DOID:3978;8.64e-26;1!DOID:3394;8.64e-26;1!DOID:5844;8.64e-26;1!DOID:1287;9.22e-26;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.88e-50,2;DOID:178,5.93e-26,1;DOID:326,5.93e-26,1;DOID:3978,5.93e-26,1;DOID:3394,5.93e-26,1;DOID:5844,5.93e-26,1;DOID:1287,7.64e-26,4 | |||
|ontology_enrichment_uberon=UBERON:0004177!7.17e-14!7;UBERON:0007023!2.08e-12!115;UBERON:0007100!4.11e-11!27;UBERON:0003978!8.75e-10!3;UBERON:0009751!8.75e-10!3;UBERON:0000946!8.75e-10!3;UBERON:0002523!8.75e-10!3;UBERON:0005983!8.75e-10!3;UBERON:0002165!8.75e-10!3;UBERON:0002062!8.75e-10!3;UBERON:0007280!8.75e-10!3;UBERON:0002106!5.80e-09!3;UBERON:0004854!5.80e-09!3;UBERON:0009034!5.80e-09!3;UBERON:0002095!5.80e-09!3;UBERON:0004782!5.80e-09!3;UBERON:0003281!5.80e-09!3;UBERON:0009664!5.80e-09!3;UBERON:0002296!5.80e-09!3;UBERON:0005602!5.80e-09!3;UBERON:0001179!5.80e-09!3;UBERON:0006293!5.80e-09!3;UBERON:0002146!4.89e-08!1;UBERON:0005623!4.89e-08!1;UBERON:0002135!6.80e-08!1;UBERON:0002084!7.26e-08!1;UBERON:0002082!7.26e-08!1;UBERON:0004706!7.26e-08!1;UBERON:0007029!7.76e-08!1;UBERON:0002022!1.48e-07!1;UBERON:0003112!1.69e-07!1;UBERON:0000032!1.69e-07!1;UBERON:0005253!1.69e-07!1;UBERON:0003128!1.69e-07!1;UBERON:0002241!1.69e-07!1;UBERON:0001703!1.69e-07!1;UBERON:0004761!1.69e-07!1;UBERON:0009617!1.69e-07!1;UBERON:0002581!2.47e-07!1;UBERON:0001950!4.13e-07!20;UBERON:0002370!7.29e-07!4;UBERON:0005058!7.29e-07!4;UBERON:0009113!7.29e-07!4;UBERON:0003295!7.29e-07!4;UBERON:0005562!7.29e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;8.37e-34;3!UBERON:0000946;8.37e-34;3!UBERON:0002146;3.58e-26;1!UBERON:0005623;3.58e-26;1!UBERON:0002135;8.64e-26;1!UBERON:0007100;4.98e-25;25!UBERON:0002133;1.29e-13;2!UBERON:0010313;6.77e-11;10!UBERON:0000948;7.29e-11;22!UBERON:0000178;1.59e-07;15!UBERON:0000179;1.59e-07;15!UBERON:0000463;1.59e-07;15!UBERON:0003103;3.91e-07;61!UBERON:0001009;9.11e-07;112 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.08e-33,3;UBERON:0009751,1.08e-33,3;UBERON:0000946,1.08e-33,3;UBERON:0002523,1.08e-33,3;UBERON:0005983,1.08e-33,3;UBERON:0002165,1.08e-33,3;UBERON:0002062,1.08e-33,3;UBERON:0007280,1.08e-33,3;UBERON:0002146,3.58e-26,1;UBERON:0005623,3.58e-26,1;UBERON:0002135,1.26e-25,1;UBERON:0007100,3.31e-23,27;UBERON:0004797,4.37e-15,7;UBERON:0002133,1.55e-13,2;UBERON:0010313,7.30e-11,10;UBERON:0002342,7.30e-11,10;UBERON:0005062,7.30e-11,10;UBERON:0001009,7.41e-11,112;UBERON:0000948,5.40e-10,24;UBERON:0005498,5.40e-10,24;UBERON:0004140,5.40e-10,24;UBERON:0009881,5.40e-10,24;UBERON:0004141,5.40e-10,24;UBERON:0003084,5.40e-10,24;UBERON:0007005,5.40e-10,24;UBERON:0004139,5.40e-10,24;UBERON:0004291,5.40e-10,24;UBERON:0003103,2.19e-09,68;UBERON:0007023,6.74e-08,114;UBERON:0000178,1.59e-07,15;UBERON:0000179,1.59e-07,15;UBERON:0000463,1.59e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13929437434833,0.476463550915578,0,0,0,1.58625035258854,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,4.12488763221031,0,1.79711100449092,7.72606886645828,0.446342914883745,5.50904474391155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p@chr12:825753..825767,- | |||
}} |
Latest revision as of 12:58, 24 July 2015
Short description: | p@chr12:825753..825767, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:825753..825767, - |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
valve | 1.08e-33 | 3 |
cardiac mesenchyme | 1.08e-33 | 3 |
cardial valve | 1.08e-33 | 3 |
tunica intima | 1.08e-33 | 3 |
heart layer | 1.08e-33 | 3 |
endocardium | 1.08e-33 | 3 |
endocardial cushion | 1.08e-33 | 3 |
presumptive endocardium | 1.08e-33 | 3 |
pulmonary valve | 3.58e-26 | 1 |
semi-lunar valve | 3.58e-26 | 1 |
mitral valve | 1.26e-25 | 1 |
primary circulatory organ | 3.31e-23 | 27 |
blood vessel layer | 4.37e-15 | 7 |
atrioventricular valve | 1.55e-13 | 2 |
neural crest-derived structure | 7.30e-11 | 10 |
neural crest | 7.30e-11 | 10 |
neural fold | 7.30e-11 | 10 |
circulatory system | 7.41e-11 | 112 |
heart | 5.40e-10 | 24 |
primitive heart tube | 5.40e-10 | 24 |
primary heart field | 5.40e-10 | 24 |
anterior lateral plate mesoderm | 5.40e-10 | 24 |
heart tube | 5.40e-10 | 24 |
heart primordium | 5.40e-10 | 24 |
cardiac mesoderm | 5.40e-10 | 24 |
cardiogenic plate | 5.40e-10 | 24 |
heart rudiment | 5.40e-10 | 24 |
compound organ | 2.19e-09 | 68 |
adult organism | 6.74e-08 | 114 |
blood | 1.59e-07 | 15 |
haemolymphatic fluid | 1.59e-07 | 15 |
organism substance | 1.59e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.88e-50 | 2 |
vascular disease | 5.93e-26 | 1 |
ischemia | 5.93e-26 | 1 |
extrinsic cardiomyopathy | 5.93e-26 | 1 |
myocardial ischemia | 5.93e-26 | 1 |
myocardial infarction | 5.93e-26 | 1 |
cardiovascular system disease | 7.64e-26 | 4 |