FFCP PHASE1:Hg19::chr13:24334287..24334315,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:24334287..24334315,- | |||
|coexpression_cluster_id=C188 | |||
|description=CAGE_peak_at_chr13:24334287..24334315,- | |||
|id=chr13:24334287..24334315,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.16e-26;1!UBERON:0010226;5.93e-26;1!UBERON:0000358;1.11e-25;1!UBERON:0005062;1.43e-25;4!UBERON:0007284;1.43e-25;4 | |||
|ontology_enrichment_disease=DOID:114!5.37e-19!2;DOID:178!2.59e-10!1;DOID:326!2.59e-10!1;DOID:3978!2.59e-10!1;DOID:3394!2.59e-10!1;DOID:5844!2.59e-10!1;DOID:1287!5.81e-10!4 | |||
|ontology_enrichment_disease_v019=DOID:114;4.54e-50;2!DOID:178;7.62e-26;1!DOID:326;7.62e-26;1!DOID:3978;7.62e-26;1!DOID:3394;7.62e-26;1!DOID:5844;7.62e-26;1!DOID:1287;1.19e-25;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.00e-50,2;DOID:178,7.62e-26,1;DOID:326,7.62e-26,1;DOID:3978,7.62e-26,1;DOID:3394,7.62e-26,1;DOID:5844,7.62e-26,1;DOID:1287,1.11e-25,4 | |||
|ontology_enrichment_uberon=UBERON:0004151!1.60e-27!3;UBERON:0003978!2.50e-27!3;UBERON:0009751!2.50e-27!3;UBERON:0000946!2.50e-27!3;UBERON:0002523!2.50e-27!3;UBERON:0005983!2.50e-27!3;UBERON:0002165!2.50e-27!3;UBERON:0002062!2.50e-27!3;UBERON:0007280!2.50e-27!3;UBERON:0007100!1.81e-25!27;UBERON:0002081!5.88e-19!2;UBERON:0002133!7.68e-19!2;UBERON:0003103!9.91e-14!69;UBERON:0000948!6.54e-13!24;UBERON:0005498!6.54e-13!24;UBERON:0004140!6.54e-13!24;UBERON:0009881!6.54e-13!24;UBERON:0004141!6.54e-13!24;UBERON:0003084!6.54e-13!24;UBERON:0007005!6.54e-13!24;UBERON:0004139!6.54e-13!24;UBERON:0004291!6.54e-13!24;UBERON:0007023!1.12e-10!115;UBERON:0002079!1.65e-10!1;UBERON:0002135!2.16e-10!1;UBERON:0002084!2.37e-10!1;UBERON:0002082!2.37e-10!1;UBERON:0004706!2.37e-10!1;UBERON:0002146!2.84e-10!1;UBERON:0005623!2.84e-10!1;UBERON:0002134!3.40e-10!1;UBERON:0005208!3.40e-10!1;UBERON:0005946!3.40e-10!1;UBERON:0005965!3.40e-10!1;UBERON:0002078!3.40e-10!1;UBERON:0007029!4.06e-10!1;UBERON:0000349!9.55e-08!5;UBERON:0001009!1.01e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.58e-48;25!UBERON:0004151;4.66e-34;3!UBERON:0003978;1.08e-33;3!UBERON:0000946;1.08e-33;3!UBERON:0002079;2.16e-26;1!UBERON:0002135;4.06e-26;1!UBERON:0002084;5.93e-26;1!UBERON:0002082;5.93e-26;1!UBERON:0002146;1.11e-25;1!UBERON:0005623;1.11e-25;1!UBERON:0000948;1.82e-18;22!UBERON:0002081;6.43e-14;2!UBERON:0002133;8.82e-14;2!UBERON:0010313;7.30e-11;10!UBERON:0003103;5.37e-08;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.95e-45,27;UBERON:0004151,4.66e-34,3;UBERON:0003978,1.08e-33,3;UBERON:0009751,1.08e-33,3;UBERON:0000946,1.08e-33,3;UBERON:0002523,1.08e-33,3;UBERON:0005983,1.08e-33,3;UBERON:0002165,1.08e-33,3;UBERON:0002062,1.08e-33,3;UBERON:0007280,1.08e-33,3;UBERON:0002079,2.16e-26,1;UBERON:0002135,4.61e-26,1;UBERON:0002084,5.93e-26,1;UBERON:0002082,5.93e-26,1;UBERON:0010226,5.93e-26,1;UBERON:0002146,9.79e-26,1;UBERON:0005623,9.79e-26,1;UBERON:0003103,6.69e-18,68;UBERON:0000948,5.68e-17,24;UBERON:0005498,5.68e-17,24;UBERON:0004140,5.68e-17,24;UBERON:0009881,5.68e-17,24;UBERON:0004141,5.68e-17,24;UBERON:0003084,5.68e-17,24;UBERON:0007005,5.68e-17,24;UBERON:0004139,5.68e-17,24;UBERON:0004291,5.68e-17,24;UBERON:0004797,4.37e-15,7;UBERON:0002081,6.43e-14,2;UBERON:0010227,6.43e-14,2;UBERON:0002133,9.40e-14,2;UBERON:0001009,6.96e-11,112;UBERON:0010313,7.30e-11,10;UBERON:0002342,7.30e-11,10;UBERON:0005062,7.30e-11,10;UBERON:0007023,1.08e-10,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.21631924198439,2.97908551215189,0.717873024576814,3.59422200898184,9.44297305900456,17.6305451379079,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,29.302508381308,5.95882773328889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr13:24334287..24334315,- | |||
}} |
Latest revision as of 15:09, 24 July 2015
Short description: | p@chr13:24334287..24334315, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:24334287..24334315, - |
Coexpression cluster: | C188_left_heart_tongue_skeletal_Skeletal_diaphragm_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 8.95e-45 | 27 |
cardiac chamber | 4.66e-34 | 3 |
valve | 1.08e-33 | 3 |
cardiac mesenchyme | 1.08e-33 | 3 |
cardial valve | 1.08e-33 | 3 |
tunica intima | 1.08e-33 | 3 |
heart layer | 1.08e-33 | 3 |
endocardium | 1.08e-33 | 3 |
endocardial cushion | 1.08e-33 | 3 |
presumptive endocardium | 1.08e-33 | 3 |
left cardiac atrium | 2.16e-26 | 1 |
mitral valve | 4.61e-26 | 1 |
heart left ventricle | 5.93e-26 | 1 |
cardiac ventricle | 5.93e-26 | 1 |
future cardiac ventricle | 5.93e-26 | 1 |
pulmonary valve | 9.79e-26 | 1 |
semi-lunar valve | 9.79e-26 | 1 |
compound organ | 6.69e-18 | 68 |
heart | 5.68e-17 | 24 |
primitive heart tube | 5.68e-17 | 24 |
primary heart field | 5.68e-17 | 24 |
anterior lateral plate mesoderm | 5.68e-17 | 24 |
heart tube | 5.68e-17 | 24 |
heart primordium | 5.68e-17 | 24 |
cardiac mesoderm | 5.68e-17 | 24 |
cardiogenic plate | 5.68e-17 | 24 |
heart rudiment | 5.68e-17 | 24 |
blood vessel layer | 4.37e-15 | 7 |
cardiac atrium | 6.43e-14 | 2 |
future cardiac atrium | 6.43e-14 | 2 |
atrioventricular valve | 9.40e-14 | 2 |
circulatory system | 6.96e-11 | 112 |
neural crest-derived structure | 7.30e-11 | 10 |
neural crest | 7.30e-11 | 10 |
neural fold | 7.30e-11 | 10 |
adult organism | 1.08e-10 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.00e-50 | 2 |
vascular disease | 7.62e-26 | 1 |
ischemia | 7.62e-26 | 1 |
extrinsic cardiomyopathy | 7.62e-26 | 1 |
myocardial ischemia | 7.62e-26 | 1 |
myocardial infarction | 7.62e-26 | 1 |
cardiovascular system disease | 1.11e-25 | 4 |