FFCP PHASE1:Hg19::chr14:23857011..23857025,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:23857011..23857025,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_at_chr14:23857011..23857025,- | |||
|id=chr14:23857011..23857025,- | |||
|ontology_enrichment_celltype=CL:0000746!5.93e-08!3;CL:0000513!5.93e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000746;2.89e-12;3!CL:0000737;1.57e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,2.89e-12,3;CL:0000513,2.89e-12,3;CL:0000737,1.57e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0010227;3.61e-34;1!CL:0000513;2.89e-12;3!UBERON:0005062;1.22e-09;4!UBERON:0007284;1.22e-09;4 | |||
|ontology_enrichment_disease=DOID:114!5.99e-41!2;DOID:178!2.82e-21!1;DOID:326!2.82e-21!1;DOID:3978!2.82e-21!1;DOID:3394!2.82e-21!1;DOID:5844!2.82e-21!1;DOID:1287!4.68e-21!4 | |||
|ontology_enrichment_disease_v019=DOID:114;1.45e-66;2!DOID:178;5.05e-34;1!DOID:326;5.05e-34;1!DOID:3978;5.05e-34;1!DOID:3394;5.05e-34;1!DOID:5844;5.05e-34;1!DOID:1287;5.98e-34;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.45e-66,2;DOID:178,5.05e-34,1;DOID:326,5.05e-34,1;DOID:3978,5.05e-34,1;DOID:3394,5.05e-34,1;DOID:5844,5.05e-34,1;DOID:1287,5.98e-34,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.34e-46!27;UBERON:0003978!1.82e-27!3;UBERON:0009751!1.82e-27!3;UBERON:0000946!1.82e-27!3;UBERON:0002523!1.82e-27!3;UBERON:0005983!1.82e-27!3;UBERON:0002165!1.82e-27!3;UBERON:0002062!1.82e-27!3;UBERON:0007280!1.82e-27!3;UBERON:0002135!1.88e-21!1;UBERON:0002079!2.30e-21!1;UBERON:0002146!5.16e-21!1;UBERON:0005623!5.16e-21!1;UBERON:0007029!7.72e-21!1;UBERON:0000948!8.11e-21!24;UBERON:0005498!8.11e-21!24;UBERON:0004140!8.11e-21!24;UBERON:0009881!8.11e-21!24;UBERON:0004141!8.11e-21!24;UBERON:0003084!8.11e-21!24;UBERON:0007005!8.11e-21!24;UBERON:0004139!8.11e-21!24;UBERON:0004291!8.11e-21!24;UBERON:0003103!3.95e-18!69;UBERON:0001009!7.84e-14!113;UBERON:0002133!2.02e-11!2;UBERON:0002081!2.23e-11!2;UBERON:0004872!2.05e-08!84;UBERON:0007023!3.06e-08!115;UBERON:0004151!5.18e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.50e-47;25!UBERON:0002135;2.58e-34;1!UBERON:0002079;3.61e-34;1!UBERON:0002133;6.48e-18;2!UBERON:0002081;7.67e-18;2!UBERON:0000948;2.85e-14;22!UBERON:0003978;2.07e-12;3!UBERON:0000946;2.07e-12;3!UBERON:0004151;2.31e-12;3!UBERON:0003103;1.83e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.38e-44,27;UBERON:0002135,2.58e-34,1;UBERON:0002079,3.61e-34,1;UBERON:0002133,6.48e-18,2;UBERON:0003103,7.10e-18,68;UBERON:0002081,7.67e-18,2;UBERON:0010227,7.67e-18,2;UBERON:0000948,3.78e-13,24;UBERON:0005498,3.78e-13,24;UBERON:0004140,3.78e-13,24;UBERON:0009881,3.78e-13,24;UBERON:0004141,3.78e-13,24;UBERON:0003084,3.78e-13,24;UBERON:0007005,3.78e-13,24;UBERON:0004139,3.78e-13,24;UBERON:0004291,3.78e-13,24;UBERON:0003978,2.07e-12,3;UBERON:0009751,2.07e-12,3;UBERON:0000946,2.07e-12,3;UBERON:0002523,2.07e-12,3;UBERON:0005983,2.07e-12,3;UBERON:0002165,2.07e-12,3;UBERON:0002062,2.07e-12,3;UBERON:0007280,2.07e-12,3;UBERON:0004151,2.31e-12,3;UBERON:0001009,4.95e-11,112;UBERON:0007023,1.09e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1983792737907,0.916641696046735,0,6.58940701646671,21.032076358692,1.11585728720936,0.604651252380536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0057345692271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr14:23857011..23857025,- | |||
}} |
Latest revision as of 19:31, 24 July 2015
Short description: | p@chr14:23857011..23857025, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:23857011..23857025, - |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 2.89e-12 | 3 |
cardiac muscle myoblast | 2.89e-12 | 3 |
striated muscle cell | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 4.38e-44 | 27 |
mitral valve | 2.58e-34 | 1 |
left cardiac atrium | 3.61e-34 | 1 |
atrioventricular valve | 6.48e-18 | 2 |
compound organ | 7.10e-18 | 68 |
cardiac atrium | 7.67e-18 | 2 |
future cardiac atrium | 7.67e-18 | 2 |
heart | 3.78e-13 | 24 |
primitive heart tube | 3.78e-13 | 24 |
primary heart field | 3.78e-13 | 24 |
anterior lateral plate mesoderm | 3.78e-13 | 24 |
heart tube | 3.78e-13 | 24 |
heart primordium | 3.78e-13 | 24 |
cardiac mesoderm | 3.78e-13 | 24 |
cardiogenic plate | 3.78e-13 | 24 |
heart rudiment | 3.78e-13 | 24 |
valve | 2.07e-12 | 3 |
cardiac mesenchyme | 2.07e-12 | 3 |
cardial valve | 2.07e-12 | 3 |
tunica intima | 2.07e-12 | 3 |
heart layer | 2.07e-12 | 3 |
endocardium | 2.07e-12 | 3 |
endocardial cushion | 2.07e-12 | 3 |
presumptive endocardium | 2.07e-12 | 3 |
cardiac chamber | 2.31e-12 | 3 |
circulatory system | 4.95e-11 | 112 |
adult organism | 1.09e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.45e-66 | 2 |
vascular disease | 5.05e-34 | 1 |
ischemia | 5.05e-34 | 1 |
extrinsic cardiomyopathy | 5.05e-34 | 1 |
myocardial ischemia | 5.05e-34 | 1 |
myocardial infarction | 5.05e-34 | 1 |
cardiovascular system disease | 5.98e-34 | 4 |