FFCP PHASE1:Hg19::chr14:62213827..62213853,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3091 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4910 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=106bp_to_X72726_5end | |||
|cluster_id=chr14:62213827..62213853,+ | |||
|description=CAGE_peak_6_at_HIF1A_5end | |||
|id=chr14:62213827..62213853,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.17e-13!42;CL:0000048!7.02e-13!430;CL:0000034!1.04e-12!444;CL:0000723!1.66e-12!436;CL:0000860!2.26e-12!45;CL:0002194!3.44e-11!63;CL:0000576!3.44e-11!63;CL:0000040!3.44e-11!63;CL:0000559!3.44e-11!63;CL:0002009!1.13e-10!65;CL:0000012!1.35e-10!682;CL:0000766!1.42e-10!76;CL:0000548!1.53e-10!679;CL:0000004!1.53e-10!679;CL:0000255!1.53e-10!679;CL:0002320!1.03e-09!365;CL:0000134!4.78e-09!358;CL:0000839!3.36e-08!70;CL:0000003!3.79e-08!722;CL:0000144!3.83e-08!625;CL:0000557!5.02e-08!71;CL:0002371!6.39e-08!591;CL:0000219!2.57e-07!390;CL:0000063!6.34e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.80e-15;33!CL:0002057;6.80e-15;33!CL:0000473;1.13e-12;39!CL:0000234;1.13e-12;39!CL:0000576;2.50e-08;48!CL:0000766;3.35e-07;69!CL:0002334;4.30e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.41e-17,427;CL:0000723,1.17e-16,433;CL:0000473,4.73e-16,48;CL:0000234,4.73e-16,48;CL:0000034,7.15e-16,441;CL:0000860,1.43e-15,42;CL:0002057,1.43e-15,42;CL:0002320,4.80e-14,361;CL:0000134,4.00e-13,354;CL:0000766,2.30e-12,72;CL:0002194,3.25e-12,59;CL:0000576,3.25e-12,59;CL:0000040,3.25e-12,59;CL:0000559,3.25e-12,59;CL:0002009,2.01e-11,61;CL:0000839,1.11e-09,66;CL:0000557,2.27e-09,67;CL:0000219,3.80e-09,386;CL:0000057,3.69e-07,76;CL:0002334,9.80e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002057;3.60e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.42e-10!375;UBERON:0002204!1.64e-07!167;UBERON:0002371!7.73e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.18e-14,371;UBERON:0002204,5.68e-11,167;UBERON:0000926,1.75e-09,315;UBERON:0004120,1.75e-09,315;UBERON:0006603,1.75e-09,315;UBERON:0004765,3.60e-09,90;UBERON:0002371,8.14e-09,76;UBERON:0001434,1.92e-08,100;UBERON:0001474,4.97e-08,82 | |||
|phase1_expression=6.17706489519893,3.42560838225573,3.66481450649525,7.00513088471913,1.78784437770915,13.0850778615055,5.06599756336621,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,1.8564952944007,2.31978163009541,0.672325146451775,1.20538905604795,2.92124036154949,1.95173119516203,0,0,0.313454721478088,0,0.958120975510189,0.753255837568817,0.0764134057479513,0,0.0787107813136792,0,0.383829398097213,0.928896739896456,0.919421224478927,0.30120591877825,0,0.232401601740905,0.284338464974843,0,2.76997704265939,4.61252229181326,4.12320654360118,0.223915474239924,0.32389366601898,0.515151135268373,1.16318591023652,1.88937971844405,0.485168122375632,1.85943229524548,2.05583944010913,1.85823822537062,4.60307827715441,3.07392847834921,2.12834006899727,3.7922024881028,1.29096936716765,1.35426486594342,6.02375486536335,1.09162460023138,1.12361742222542,2.75475503133812,0.641858054152187,2.55734850319616,3.62836430205388,4.18873681005427,2.55734850319616,4.06292934080018,1.70215567407342,0,4.77372463987812,3.65038042894141,3.69221035998698,8.47559303686716,2.57794345191295,2.53169909952708,1.26753171787165,0.425208599930087,0.838634582033504,1.23561494261145,1.80212271409808,0.32145117339416,0.285012743741249,0.59675003159727,0.730656615058536,0,0.546138611262131,0,1.28019066769952,0,0,0,0,1.1384259382189,1.17447437874188,0.382273228125229,0,1.12101712596307,0.526768169550154,0.590129310341499,0.393010762749165,0.822405995998037,0.167186495390678,0.32592226663359,0.473447805734733,0,0,0.589211814949674,0,0.541607727530031,0.128091319725675,0.520237390239513,0.822189523018381,0.552700035571697,0,0.296573126324121,0.267540828089713,2.09071047609954,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,1.24930726552346,0,0,0.403213486449465,0.534880391567015,0.579297615531196,19.5045493051169,5.36560687762909,1.02290049474824,1.44575660953827,0,4.20054904986389,0,4.37971383272372,2.17430079477356,1.99556457716308,3.77689578480442,0.0654895377488563,0,0.370784442784429,1.62273696827342,0.348259474598534,0.664789802594326,0.953962497221368,0.571994910780128,0,0,0,0,1.13061588384802,0,0.275118041940067,0,1.03366703667732,1.77883131343355,0.33472061276467,0,0,0.488124115096339,0.367663080345869,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0,5.27121669744253,7.75560528296651,0,6.46063537203914,1.51956613997496,1.45650098894541,2.58152958673932,1.77334191099179,1.12135520028461,3.20246987189115,0,1.55605517699883,2.2900814251847,1.63461903113459,0,1.72852777344,0,0.624320153660641,0,1.49448680551801,0.469737994575059,0.323745888736263,0.140450806702248,1.42907919878425,0.737005903870608,0.103325781175765,1.18800285728205,1.7308685049499,0,0,0.673344455816265,0.750711119231785,0,0,1.22595118319608,0.300476117813194,3.17610112848059,3.04962380671065,1.70845911054854,2.54318281391474,1.20036438433761,0.824420233907511,3.09168648054755,0.558350568994769,0.675105328965065,1.26668106709558,4.29137416214995,1.10459878370759,0.323292113637624,2.13005755509969,0.503760491138201,0.508681776931463,0.57978255948989,0.545492241181669,0,0.487894824518382,0.265059536642971,0.580969714347592,0.621966330092223,0.756962552626885,1.82488679537915,0,2.57296375277154,0,2.3218396401599,0.721879481669586,0.118306800039844,1.34867752062481,0.964044119533928,0.772057809126758,1.08939722046203,1.42362371466658,1.61797569792197,0.784885860501384,2.69323009862473,0,0,0,0,2.53510069643662,0.982827216677626,0,0,0.245976877086227,1.20097467208968,0.109750285408626,0,0.502644862058154,0.185176890317059,0,0,1.44331342025273,0.811512834825538,1.05667824812239,0.577465791044295,0.462985512576611,0.570762456703795,0,0,0,0.936017060556951,0.594524649154913,1.87467667973554,0.335964256397719,0.425325291727159,1.16426079513703,1.16253575405585,0,0,0.352193736052904,0,0,0,0.317489471460845,0.381988425558278,0,0,0.411309970813294,1.20137223137567,0,0.224262168690721,0.87192013766656,0.7333828582095,0.775630294546667,0,4.22651376278,0.797814349754612,1.04007436911366,0,0,0.266422179016099,2.28764789853036,0,0.823240336780769,1.30294473717494,1.42156779497018,3.16780749173372,2.41151501647669,0,1.09970290300263,8.51366464488333,2.51128545716063,8.43335757932127,1.19812427745791,3.44585807502342,0,2.31650090668127,3.49309748335652,1.61154866915906,0,0.394061520403854,0.646882724578552,0.513372145118994,0.508189248444927,0,1.54657762555539,0.167516265334349,1.91381625495949,8.98808428736619,14.9580729602012,2.07207756718018,1.34960640891054,3.00102312635806,0.813795071099207,1.87173775377726,2.3195768543631,1.89242898040722,0.819989904948992,0,2.27407504055985,0,0,0,0.347534457872331,0.195801157462741,0,0.206768026122887,2.15714200818617,0.853820462427555,0,1.66435439510497,1.20956117331872,6.69891081110698,3.52962538562544,8.98112302185835,5.25370511948374,1.02341449813341,11.5814823223397,7.42090332224955,1.69630663182921,2.13074070375753,0.9033987161519,0.519254429183621,1.04589340613963,0.483437798366489,2.6065841139427,0.644566922551274,0.68888668898764,0.546273504020151,0.655622074797121,0,0.847168708148562,0,0,0.527758144464379,0,0,3.02282282542995,0,0.270946437543853,0,0.254876273045038,0,0,0.219259876645935,0,0.256450125116389,0,0.325378394664303,0.103041011647722,0.27470839445503,0.165018999841176,0,0,4.82051789532479,0.386682873168488,0.616194468458578,2.76306614507033,2.06754858726796,0.751941714077915,1.88521702088497,2.55679882248303,0.178064071293475,2.64455864577565,1.15314040419064,0.893288987462089,1.92199783625545,3.253918845081,1.5740617341532,0.6970372701606,0.308033580176089,0,0,0.18532421910392,0.572499546967965,1.86079184679834,1.89827654831236,3.8126038784765,0,1.28381696410176,0.318203247925937,0,2.15846949099978,2.47083326762449,2.70968525395079,0,0,0.842516912477962,0,2.92456187557541,0,0.9554993798559,1.41405431953713,0,0,0,0.876901770507525,0,1.9676842561399,0,0.6196469961995,0.563391205064483,0.286822704408103,0.982490410131212,0.35667105148125,0,1.68886108238131,1.64647446479951,0,0,0.48111056362756,0.670302275535787,0,0,0.86101074534246,0,0.443430153536676,0.229723400206959,0,0.764637207142375,0,0,0,0,1.08006287447623,0,0.106824071127473,0,0.245040215981032,0.557409525377156,0.144269212976445,0.213425530045242,0.318852545457645,0.199579371432817,0,0.423347165447766,0,0.561594356226918,0,0.156679895773023,0,0.50787533340481,0,0,0,0,0.307240764308458,0,0,0.390776190804081,0,0,0.270455678475983,0,0,0.18714054040822,0.146508179271894,0,0.334330152832435,0,0.71623345421307,0.593929361665277,1.22864280839693,0,0.281338832821026,1.00177834520615,1.31843099381408,0.844501632511974,0,0.276283915531148,0,0.20453736500431,0,2.17727711363265,0.718946809178615,0.895105873378046,0.511572370226872,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0.455173793141999,0.762760950878299,0.472775363535873,0.689486746482929,0,0.868124974666461,0,0.361789315876224,0,0.221158519862449,0.886642856860642,0.87754158861589,0.21787692703798,0.278847488557207,0,2.84855139617503,0,0.359030577639089,0.325942115766024,1.27600463892768,0.457987967009312,2.13213910407454,1.02193298195737,0,0.166211681900156,0,0,0,0,0,7.806928387537,0.816164040795739,0,0,0.995261931078505,0,0.611030144933625,0,0.370691816839509,0.208843899010911,0.067401132980677,0,0.234264445725339,0.729819156862664,0,0.728341138602278,0.394584402849391,0,0.30607276163049,0.189559738885464,0.150323419414493,0.207376382794494,0,0,0,0,0,0.277349346026277,1.38847790668105,0.293977192243133,0.174118413160805,0.52418000472609,0.51595809741485,0.387025325156341,0.365446585430928,0.492692742319255,0.290967049465258,0.0882561266915003,0,2.19267079434801,0.19871461170299,0.126621591911757,0.195551382734803,0.400794101257669,0,0.799238438328521,0.576361668616424,0,0.171594997861965,0.720273989940749,0.745515213392595,0.471388069233591,0.135904206073614,0.209205692624666,0.509991088181609,0,1.80126086612937,0.547621515567972,0,3.43812353135966,0.262887354279314,0,0.229160424011684,2.87149209830726,1.39775300349294,0,0.223171457441873,0.335917362433631,0.360299883542404,0,0.0787831823072236,0.247247575143499,0.202210631562555,0.78741985211799,0.169346664131569,1.59045937961861,0,0.643012593860077,0.275078873194468,1.24632101408756,0,0.77380195455795,0.0607495566580247,0.335434687599266,0.630445658393585,0,0.211200673038813,1.43429871466276,0,0.714695326373367,1.32418394073086,0,0,2.5926644736038,0.979762080328227,0,0.410462603746695,1.19271615249795,1.81299346432201,0,1.32506888912221,0.904980694530854,0.26446520348538,0.342173675768659,0,0.320362237703084,0.628817220398664,0,0.992332043623902,0.197611631897944,0.487170393523584,0,0,0,0,0,0,1.77213635993397,1.09823638411767,0.250381861413,1.72022758707021,0.110929051536852,0,0.138348634936231,0.249960815924213,0.151649117541648,1.7127920012698,1.17632909849086,0.468334905806882,0.579684114443301,1.34329322598187,1.8697064787778,1.10961172300523,1.13641803165053,4.52822223154635,1.77962244319307,0.915360273587694,1.81477108515887,1.39893480524502,1.47855149989634,1.59296767163702,1.34940933649081,1.55262956876259,1.65882483136342,1.86089200190596,0.521745061811734,0,4.95046775819434,2.84809513243263,4.18251916165887,1.39633724155235,1.39210127963548,6.76763010787647,4.80033317595784,2.74716564146234,5.05124233148879,0,0.192619830407303,0.428883182749851,0.260994291965212,1.13352962756136,0,0.489473409012935,0,0.926404341482917,1.53498834705095,0.530067437837643,0.578742114812744,0.337884881306145,1.02496607435179,0,0.303859956177382,0.276516872303462,0.389720617678777,0.398594520940089,0,4.91414773269619,10.3224621676562,0.422624246717254,0.19998739585493,0,0.172214979660816,0,0.368211900503681,0.419638523158333,0,0,0.215649622793364,0.157265941855896,0.218419276384028,0.848662649770126,0,0.123935764259002,0,0.636008701306837,0.157723490002507,0,3.52675943690684,1.531227386766,0,0,0.478901577171454,0,0.756215088665154,0,0,0,0.196295437002051,0.825788063434183,0.183428598521679,0.693153996902029,3.81382095467167,0.690359926060101,0.198916222116275,0.300841313397029,5.44603685499504,0,0,1.14640342257068,0.443568258651136,0.0675375846183947,2.34323429584154,0.413373593002368,0,1.64092442705466,0,0.496211178389294,0,1.14986184875636,0,0.336283722218824,0,0.227662191351298,0.0887023701626388,0.460935950223117,0.685952037749674,0,0,0.945550727071746,1.4460082245969,0,0.157115589916002,0,0,0,0,0,0.790068058663633,0.348724276104376,0.347716544605159,0.801711364730253,0.207216164163037,0,0,0,0.828324005113957,0.340853619036631,0.423387050190929,0,1.5510319283216,1.91107787795487,1.11855431797792,0.392600934460972,0,0,0,0,0.485710993059139,0.701818390386317,0.795803100645473,0.594600453887843,0.33883824611688,0.439762066981716,0.452888530700021,0.154348316215889,0,0.470317296361523,0,0.235676547101626,0.785233868459781,0.297046400327086,1.6906229103336,2.37897960562944,0.187967835959707,0.128915775947154,0.0999411559249289,0.178553938605658,0,1.36410323371586,0,0,0.143339583151451,0,0.0679914901909147,0.872701380680755,1.5870805215462,7.43990036333503,4.62175628631418,3.02838593486652,0.883164973845552,0.218531143927391,0.633492505057185,0.203977659483963,0.26721740526556,0.18378979906969,0.752122617877125,0.0757786982182394,0,0.829169439458779,0.20686599172379,0,0.476128862927481,0,0.124149428591716,1.12131862580613,0.12729431655633,0.808468755832877,0.435433495793923,0.342233301085281,0.0673520530145875,0.286888821570705,1.33064142618405,0.162806537221949,0.426909383510862,0,0.0898252021065869,0,0.122241444182866,0.813792356631477,0,0.201273793591026,0.320568492303233 | |||
|short_description=p6@HIF1A | |||
}} |
Latest revision as of 23:37, 24 September 2015
Short description: | p6@HIF1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HIF1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 106bp_to_X72726_5end |
EntrezGene: | HIF1A |
HGNC: | 4910 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.41e-17 | 427 |
somatic stem cell | 1.17e-16 | 433 |
defensive cell | 4.73e-16 | 48 |
phagocyte | 4.73e-16 | 48 |
stem cell | 7.15e-16 | 441 |
classical monocyte | 1.43e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.43e-15 | 42 |
connective tissue cell | 4.80e-14 | 361 |
mesenchymal cell | 4.00e-13 | 354 |
myeloid leukocyte | 2.30e-12 | 72 |
monopoietic cell | 3.25e-12 | 59 |
monocyte | 3.25e-12 | 59 |
monoblast | 3.25e-12 | 59 |
promonocyte | 3.25e-12 | 59 |
macrophage dendritic cell progenitor | 2.01e-11 | 61 |
myeloid lineage restricted progenitor cell | 1.11e-09 | 66 |
granulocyte monocyte progenitor cell | 2.27e-09 | 67 |
motile cell | 3.80e-09 | 386 |
fibroblast | 3.69e-07 | 76 |
preadipocyte | 9.80e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.18e-14 | 371 |
musculoskeletal system | 5.68e-11 | 167 |
mesoderm | 1.75e-09 | 315 |
mesoderm-derived structure | 1.75e-09 | 315 |
presumptive mesoderm | 1.75e-09 | 315 |
skeletal element | 3.60e-09 | 90 |
bone marrow | 8.14e-09 | 76 |
skeletal system | 1.92e-08 | 100 |
bone element | 4.97e-08 | 82 |