FFCP PHASE1:Hg19::chr8:22019303..22019321,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:22019303..22019321,+
|short_description=p1@SFTPC
|description=CAGE_peak_1_at_SFTPC_5end
|association_with_transcript=0bp_to_ENST00000437090,ENST00000518615...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6440 | |EntrezGene=6440 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10802 | |HGNC=10802 | ||
|TSSclassifier=strong | |||
|UniProt=C9JYF6,E5RG93,E5RG20,E9PGX3,E5RI92,E5RHW5,E5RI64 | |UniProt=C9JYF6,E5RG93,E5RG20,E9PGX3,E5RI92,E5RHW5,E5RI64 | ||
|association_with_transcript=0bp_to_ENST00000437090,ENST00000518615,ENST00000520605,ENST00000521315,ENST00000522109,ENST00000523296,ENST00000524255_5end | |||
|cluster_id=chr8:22019303..22019321,+ | |||
|coexpression_cluster_id=C95 | |||
|description=CAGE_peak_1_at_SFTPC_5end | |||
|id=chr8:22019303..22019321,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;5.14e-19;1!UBERON:0006242;5.14e-19;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.07e-10!115;UBERON:0000025!1.41e-09!194;UBERON:0001950!4.17e-09!20;UBERON:0000477!4.63e-09!286;UBERON:0001893!4.93e-09!34;UBERON:0002619!2.88e-08!22;UBERON:0000483!5.70e-08!309;UBERON:0001049!6.40e-08!57;UBERON:0005068!6.40e-08!57;UBERON:0006241!6.40e-08!57;UBERON:0007135!6.40e-08!57;UBERON:0000119!7.66e-08!312;UBERON:0004111!9.94e-08!241;UBERON:0004177!1.10e-07!7;UBERON:0002616!1.34e-07!59;UBERON:0002171!1.46e-07!1;UBERON:0006518!1.46e-07!1;UBERON:0008949!1.46e-07!1;UBERON:0000101!1.46e-07!1;UBERON:0002167!1.46e-07!1;UBERON:0001869!1.85e-07!32;UBERON:0002780!2.44e-07!41;UBERON:0001890!2.44e-07!41;UBERON:0006240!2.44e-07!41;UBERON:0001831!2.67e-07!1;UBERON:0001567!2.67e-07!1;UBERON:0008801!2.67e-07!1;UBERON:0000956!3.00e-07!25;UBERON:0000203!3.00e-07!25;UBERON:0002426!3.01e-07!1;UBERON:0003831!3.01e-07!1;UBERON:0003898!3.01e-07!1;UBERON:0004830!3.01e-07!1;UBERON:0001774!3.01e-07!1;UBERON:0003830!3.01e-07!1;UBERON:0005175!3.01e-07!1;UBERON:0003897!3.01e-07!1;UBERON:0001103!3.01e-07!1;UBERON:0010084!3.01e-07!1;UBERON:0002791!3.27e-07!33;UBERON:0003080!3.83e-07!42;UBERON:0002020!5.28e-07!34;UBERON:0003528!5.28e-07!34;UBERON:0002581!6.88e-07!1;UBERON:0007190!8.18e-07!1;UBERON:0002336!8.67e-07!1;UBERON:0001018!8.67e-07!1;UBERON:0002473!8.67e-07!1;UBERON:0005340!8.67e-07!1;UBERON:0002316!8.67e-07!1;UBERON:0003544!8.67e-07!1;UBERON:0001020!8.67e-07!1;UBERON:0005970!8.67e-07!1;UBERON:0002437!8.67e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;8.95e-20;1!UBERON:0006518;8.95e-20;1!UBERON:0008949;8.95e-20;1!UBERON:0000101;8.95e-20;1!UBERON:0002167;8.95e-20;1!UBERON:0001831;5.14e-19;1!UBERON:0001567;5.14e-19;1!UBERON:0001829;3.42e-10;2!UBERON:0004089;3.42e-10;2!UBERON:0002048;3.84e-08;22!UBERON:0000117;3.84e-08;22!UBERON:0000171;3.84e-08;22!UBERON:0000170;3.84e-08;22!UBERON:0001896;2.79e-07;3!UBERON:0005290;2.79e-07;3!UBERON:0002110;3.25e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,8.95e-20,1;UBERON:0006518,8.95e-20,1;UBERON:0008949,8.95e-20,1;UBERON:0000101,8.95e-20,1;UBERON:0002167,8.95e-20,1;UBERON:0001831,5.62e-19,1;UBERON:0001567,5.62e-19,1;UBERON:0008801,5.62e-19,1;UBERON:0001829,3.58e-10,2;UBERON:0004089,3.58e-10,2;UBERON:0002048,3.84e-08,22;UBERON:0000117,3.84e-08,22;UBERON:0000171,3.84e-08,22;UBERON:0000170,3.84e-08,22;UBERON:0005597,3.84e-08,22;UBERON:0000118,3.84e-08,22;UBERON:0001896,2.79e-07,3;UBERON:0005290,2.79e-07,3;UBERON:0010096,2.79e-07,3;UBERON:0002110,3.16e-07,3;UBERON:0006242,3.16e-07,3 | |||
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|short_description=p1@SFTPC | |||
}} | }} |
Latest revision as of 10:21, 17 September 2015
Short description: | p1@SFTPC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SFTPC_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | 0bp_to_ENST00000437090, ENST00000518615, ENST00000520605, ENST00000521315, ENST00000522109, ENST00000523296, ENST00000524255_5end |
EntrezGene: | SFTPC |
HGNC: | 10802 |
UniProt: | C9JYF6E5RG93E5RG20E9PGX3E5RI92E5RHW5E5RI64 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 8.95e-20 | 1 |
right lung lobe | 8.95e-20 | 1 |
lower lobe of lung | 8.95e-20 | 1 |
lobe of lung | 8.95e-20 | 1 |
right lung | 8.95e-20 | 1 |
parotid gland | 5.62e-19 | 1 |
cheek | 5.62e-19 | 1 |
parotid gland primordium | 5.62e-19 | 1 |
major salivary gland | 3.58e-10 | 2 |
midface | 3.58e-10 | 2 |
lung | 3.84e-08 | 22 |
respiratory tube | 3.84e-08 | 22 |
respiration organ | 3.84e-08 | 22 |
pair of lungs | 3.84e-08 | 22 |
lung primordium | 3.84e-08 | 22 |
lung bud | 3.84e-08 | 22 |
medulla oblongata | 2.79e-07 | 3 |
myelencephalon | 2.79e-07 | 3 |
future myelencephalon | 2.79e-07 | 3 |
gallbladder | 3.16e-07 | 3 |
gall bladder primordium | 3.16e-07 | 3 |