FFCP PHASE1:Hg19::chr15:60861140..60861144,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:60861140..60861144,- | |||
|coexpression_cluster_id=C1212 | |||
|description=CAGE_peak_at_chr15:60861140..60861144,- | |||
|id=chr15:60861140..60861144,- | |||
|ontology_enrichment_celltype=CL:0000791!2.96e-14!18;CL:0000789!2.96e-14!18;CL:0002420!2.96e-14!18;CL:0002419!2.96e-14!18;CL:0000790!2.96e-14!18;CL:0000084!3.49e-14!25;CL:0000827!3.49e-14!25;CL:0000838!2.56e-10!52;CL:0000542!7.40e-10!53;CL:0000051!7.40e-10!53;CL:0000625!6.99e-09!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.39e-28;18!CL:0000789;1.39e-28;18!CL:0002419;1.39e-28;18!CL:0000084;1.48e-24;25!CL:0000625;3.84e-16;11!CL:0000624;6.77e-13;6!CL:0000542;1.17e-08;53!CL:0000623;1.61e-07;3!CL:0000898;5.80e-07;3!CL:0000226;5.92e-07;3!CL:0000842;5.92e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.09e-29,18;CL:0000789,3.09e-29,18;CL:0002420,3.09e-29,18;CL:0002419,3.09e-29,18;CL:0000790,3.09e-29,18;CL:0000084,4.42e-25,25;CL:0000827,4.42e-25,25;CL:0000625,1.41e-16,11;CL:0000838,4.82e-16,52;CL:0000542,1.33e-15,53;CL:0000051,1.33e-15,53;CL:0000624,6.79e-13,6;CL:0002087,1.06e-08,115;CL:0000623,1.63e-07,3;CL:0000825,1.63e-07,3;CL:0000738,1.72e-07,136;CL:0000226,5.37e-07,3;CL:0000842,5.37e-07,3;CL:0000898,5.58e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.39e-28;18!CL:0000051;1.17e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.98e-17!115;UBERON:0000178!1.83e-07!15;UBERON:0000179!1.83e-07!15;UBERON:0000463!1.83e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.67e-11;15!UBERON:0000179;4.67e-11;15!UBERON:0000463;4.67e-11;15!UBERON:0005904;4.29e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.43e-11,15;UBERON:0000179,4.43e-11,15;UBERON:0000463,4.43e-11,15;UBERON:0005904,4.47e-08,4 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0.305653622991805,0.164201178899891,0.787107813136792,0,3.83829398097213,0.77408061658038,0,0,0,0,0,0,1.66198622559563,2.00544447470142,3.90619567288533,0.223915474239924,1.29557466407592,0,0.290796477559129,0.755751887377619,0,0,0.411167888021826,0,0,0.512321413058201,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0.587237189370939,1.52909291250092,0,0.560508562981536,0,11.0157471263747,26.331721104194,12.9528944369691,1.83905144929746,3.58514493296949,3.31413464014313,5.84480185223734,2.33961959458865,11.4896303915187,9.08288967792847,8.93652750424551,11.5282187753108,11.0550445425897,3.4531959966772,3.59255023121603,0.579606171470105,2.52087157375503,1.87278579662799,2.09071047609954,1.58633079776593,2.68254345521345,3.09264700934367,8.8556892206826,1.91139248594458,1.95325036156926,2.85135613334512,0.451725357233318,1.15187950038977,3.74792179657038,1.65744076430812,4.92676798152628,9.47551693156242,18.988253900629,15.6410356193423,0,0,0,0,0,0,0,0,0.472674085820339,0,0.263504357079378,0.392937226493138,0,0,0.324547393654683,0.174129737299267,0,1.19245312152671,0,0.371457501329565,0,0,0,0,0,0,0,0.775250277507987,0.35576626268671,0.66944122552934,0,0,0,0,0,0.803697554556718,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0.993943903390637,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0.408308342509787,0.737005903870608,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0.211931901159562,0.300091096084402,0,0.257640540045629,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,1.96565443335525,8.27105869353966,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0.845302752556,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,1.90544744788996,7.48716888767323,19.190854162497,15.0161352447306,0,0,0,0,0,0,0,0.414415513436035,0,0.500170521059677,0,0,0,0,0,0,0,1.03473071292505,0,0,0.260650843404249,0,0,4.13536052245775,7.33428282783297,2.881644060693,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,1.13345112812495,0,0.165018999841176,0,0,3.21367859688319,0.290012154876366,0,0.15350367472613,0,0.107420244868274,0.435050081742686,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,1.116475108079,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.353437207037059,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05553817648832,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0.764637207142375,0.569647187174163,1.19115887728894,1.23408681925858,1.29694662238543,1.62009431171434,0.79312517629427,0,1.92495971052672,0,0,0,0.355709216742071,0.956557636372934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0.334330152832435,1.42068073403207,1.19372242368845,0,0,0.994147647766298,0.703347082052564,0.222617410045812,4.94411622680279,0.211125408127993,1.19548792950642,1.10513566212459,0.755798243562828,0.20453736500431,1.6001024709939,0.933118762985422,0,0.716084698702437,0,0.493217028184668,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0,1.37897349296586,1.16641845353302,0.173624994933292,0,0.723578631752448,0,0.331737779793674,1.77328571372128,0.219385397153973,0,0.697118721393016,0.769502585037971,0.683652335082007,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0,1.11255605286265,0.210998064528027,0,0.565412285735763,0,0.995261931078505,0.176915129006678,0.611030144933625,5.63390144493182,6.54888876416465,6.05647307131641,0.067401132980677,0.802577647298789,0,0,0,0,2.76209081994573,0,0,0.063186579628488,0.300646838828985,0.207376382794494,0,0.330991955875499,0,0,0,0,0,0.195984794828755,0,1.22308667769421,0.171986032471617,0,0,0,0.484945082442097,0,0.90392296312213,0.411125773940253,0.397429223405979,0.126621591911757,0.195551382734803,0,0.213452994739353,0.19980960958213,0.144090417154106,1.03082936549324,1.88754497648161,0,0.248505071130865,0.235694034616795,0,0,0,0,0.600420288709789,0.684526894459965,0,0.429765441419957,4.20619766846903,1.11712960508902,1.14580212005842,0.717873024576814,0.199679000498991,0.429226048136571,0.669514372325618,0.0671834724867263,0.720599767084807,2.32991899054908,0.157566364614447,0,0.13480708770837,0,0.846733320657845,0,0.272406812223151,0.482259445395058,0.137539436597234,0.415440338029185,0.2249738915515,27.8568703640862,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| |||
|short_description=p@chr15:60861140..60861144,- | |||
}} |
Latest revision as of 03:05, 25 July 2015
Short description: | p@chr15:60861140..60861144, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:60861140..60861144, - |
Coexpression cluster: | C1212_immature_CD4_Natural_CD8_cord_lymphangiectasia_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.09e-29 | 18 |
alpha-beta T cell | 3.09e-29 | 18 |
immature T cell | 3.09e-29 | 18 |
mature T cell | 3.09e-29 | 18 |
immature alpha-beta T cell | 3.09e-29 | 18 |
T cell | 4.42e-25 | 25 |
pro-T cell | 4.42e-25 | 25 |
CD8-positive, alpha-beta T cell | 1.41e-16 | 11 |
lymphoid lineage restricted progenitor cell | 4.82e-16 | 52 |
lymphocyte | 1.33e-15 | 53 |
common lymphoid progenitor | 1.33e-15 | 53 |
CD4-positive, alpha-beta T cell | 6.79e-13 | 6 |
nongranular leukocyte | 1.06e-08 | 115 |
natural killer cell | 1.63e-07 | 3 |
pro-NK cell | 1.63e-07 | 3 |
leukocyte | 1.72e-07 | 136 |
single nucleate cell | 5.37e-07 | 3 |
mononuclear cell | 5.37e-07 | 3 |
naive T cell | 5.58e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 4.43e-11 | 15 |
haemolymphatic fluid | 4.43e-11 | 15 |
organism substance | 4.43e-11 | 15 |
duct of male reproductive system | 4.47e-08 | 4 |