FFCP PHASE1:Hg19::chr15:63353101..63353147,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:63353101..63353147,- | |||
|coexpression_cluster_id=C910 | |||
|description=CAGE_peak_at_chr15:63353101..63353147,- | |||
|id=chr15:63353101..63353147,- | |||
|ontology_enrichment_celltype=CL:0000055!1.67e-17!180;CL:0000222!5.27e-10!119;CL:0000192!1.88e-09!42;CL:0000514!1.88e-09!42;CL:0000680!8.36e-09!57;CL:0000056!8.36e-09!57;CL:0000355!8.36e-09!57;CL:0000359!8.69e-09!32;CL:0000183!3.18e-08!59;CL:0000187!3.65e-08!54;CL:0000393!1.14e-07!60;CL:0000211!1.14e-07!60;CL:0000057!1.18e-07!75;CL:0002321!2.64e-07!248;CL:0000077!2.90e-07!19;CL:0000220!3.58e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.46e-09;32!CL:0000077;4.74e-08;19!CL:0002334;8.71e-08;12!CL:0000349;6.62e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,5.63e-10,32;CL:0000192,3.36e-09,43;CL:0000514,3.36e-09,43;CL:0000057,9.96e-09,76;CL:0000077,3.28e-08,19;CL:0002334,5.57e-08,12;CL:0000222,6.67e-08,121;CL:0000349,5.29e-07,19;CL:0000680,6.53e-07,58;CL:0000056,6.53e-07,58;CL:0000355,6.53e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.30e-10!143;UBERON:0002385!2.65e-10!63;UBERON:0001015!2.65e-10!63;UBERON:0000383!2.65e-10!63;UBERON:0000468!4.57e-10!659;UBERON:0004872!5.67e-10!84;UBERON:0001134!1.24e-09!61;UBERON:0002036!1.24e-09!61;UBERON:0003082!1.24e-09!61;UBERON:0000914!6.35e-09!83;UBERON:0002329!6.35e-09!83;UBERON:0003077!6.35e-09!83;UBERON:0003059!6.35e-09!83;UBERON:0007282!6.35e-09!83;UBERON:0009618!6.35e-09!83;UBERON:0007285!6.35e-09!83;UBERON:0004290!9.63e-09!70;UBERON:0000486!1.01e-08!82;UBERON:0002100!1.30e-08!216;UBERON:0003914!2.26e-08!118;UBERON:0002049!2.66e-08!79;UBERON:0007798!2.66e-08!79;UBERON:0001009!2.90e-08!113;UBERON:0001637!5.47e-08!42;UBERON:0003509!5.47e-08!42;UBERON:0004572!5.47e-08!42;UBERON:0004573!9.15e-08!33;UBERON:0004571!9.15e-08!33;UBERON:0000481!1.70e-07!347;UBERON:0004535!1.79e-07!110;UBERON:0005156!2.05e-07!59;UBERON:0000990!2.05e-07!59;UBERON:0001981!3.91e-07!60;UBERON:0007500!3.91e-07!60;UBERON:0004537!3.91e-07!60;UBERON:0006965!3.91e-07!60;UBERON:0003104!5.32e-07!238;UBERON:0009142!5.32e-07!238;UBERON:0000475!7.90e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.18e-08;33!UBERON:0004571;3.18e-08;33!UBERON:0001637;9.04e-07;42!UBERON:0003509;9.04e-07;42!UBERON:0004572;9.04e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.87e-09,42;UBERON:0003509,2.87e-09,42;UBERON:0004572,2.87e-09,42;UBERON:0004573,6.10e-09,33;UBERON:0004571,6.10e-09,33;UBERON:0004872,1.66e-08,83;UBERON:0002385,2.95e-08,64;UBERON:0001015,2.95e-08,64;UBERON:0000383,2.95e-08,64;UBERON:0003104,1.10e-07,160;UBERON:0009142,1.10e-07,160;UBERON:0003914,1.19e-07,117;UBERON:0001134,1.53e-07,62;UBERON:0002036,1.53e-07,62;UBERON:0003082,1.53e-07,62;UBERON:0002049,1.95e-07,78;UBERON:0007798,1.95e-07,78;UBERON:0001009,5.65e-07,112 | |||
|phase1_expression=9.81063248061006,8.13581990785736,7.75249222527841,23.01685862122,10.2801051718276,13.0850778615055,7.59899634504932,0.631719873426831,0.522371256399677,1.72013755551056,0,3.49506195408276,4.74780560811216,0.618831764800233,0.662794751455832,12.101852636132,7.8350288643117,8.76372108464848,10.2465887746006,0.492484232307152,2.04000691244253,2.5076377718247,2.28988789704845,3.14811177667634,5.27279086298172,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,1.34140171940727,0.767175371061182,8.31310050484502,3.50936537445123,5.79386075843295,0.795285947051099,1.94653948121054,4.63220604103932,12.6385756553661,6.93894806975696,0.851363990735132,0,0.370784442784429,0,0.174129737299267,0,0,0,0,0,0.860234595106124,1.73570250803797,0,2.09749718104953,0.825354125820202,0,1.03366703667732,0.35576626268671,1.33888245105868,0.402829317109147,0,0.488124115096339,1.10298924103761,4.86085168729056,1.07159673940896,0.44905874525234,0.225222960966644,0,0.949265659568129,0.549605231791222,0,0,0,26.3395134398519,6.71141711822273,1.72131935057184,1.14734648299525,1.41867352879343,7.28880880184999,9.60740961567345,12.5800449692752,0.622422070799533,0.942974704487816,1.30769522490767,0.908144565869588,0.576175924479999,0,0.312160076830321,0,0.448346041655403,0.469737994575059,0.647491777472526,0.421352420106746,0.204154171254893,0.368502951935304,0,3.56400857184616,5.43987244412825,0,0,0,0.500474079487857,0,1.75591048352335,16.8568287689461,2.85452311922534,4.19699077692078,3.58779271377724,2.56268866582281,3.17897851739343,6.30191301777245,1.8549455262919,4.3798891807757,4.46680455195816,1.35021065793013,3.50773218580315,6.81571190459109,3.12969655383818,0.80823028409406,6.39017266529906,3.22406714328449,5.08681776931463,1.15956511897978,0.818238361772504,0,0.853815942907168,1.32529768321485,1.62671520017326,0.518305275076852,2.52320850875628,1.09493207722749,3.12899064659632,5.78916844373597,0,1.39310378409594,0,1.41968160047813,2.52877035117153,0.964044119533928,0.992645754591546,1.52515610864684,0.237270619111097,1.34831308160164,0.784885860501384,1.15424147083917,0,0,0,1.47008711385542,0,0,0,0,0.122988438543114,3.25978839567199,1.09750285408626,0,0.301586917234893,0.185176890317059,0,0,7.21656710126366,1.27523445472584,5.16598254637615,1.58803092537181,0.925971025153221,3.80508304469197,0,0,0,0,0.148631162288728,0,2.85569617938061,1.27597587518148,0.53735113621709,1.16253575405585,1.15014803749563,0,0,0,0,0,0,0,0,1.71072446022705,0.411309970813294,0.300343057843917,0,0.112131084345361,0,0.66004457238855,8.01484637698222,0,0.845302752556,8.24408161413099,8.32059495290929,0.257207374262142,1.41849132023278,0,1.71573592389777,0.542621605391443,1.64648067356154,0.65147236858747,2.13235169245527,1.58390374586686,4.82303003295338,1.74306691720059,11.3969209947545,0,0,0,8.38686994220539,3.44585807502342,1.42636905040718,2.75084482668401,2.87666851570537,1.79060963239896,0,0,0,0,0,0,0,0.167516265334349,1.27587750330633,0,0,0,0.736148950314839,0.500170521059677,0.542530047399471,17.6775232301186,17.1291829245275,13.7201101079523,5.15422225967938,0,2.27407504055985,2.0694614258501,5.97803038681893,2.58116835958384,0.781952530212746,0.195801157462741,1.02943027143257,0,0,0,2.72814814301633,8.32177197552485,6.65258645325297,8.93188108147597,7.82656063769118,17.1202657604175,5.63812256725084,8.69902323413396,15.6028303509299,2.96836132889982,3.85524234506639,4.79416658345443,1.31403449622095,2.59627214591811,3.60252173225874,0.604297247958111,1.40354529212299,0.552485933615378,3.3296189967736,5.82691737621495,3.93373244878272,2.70719767744447,4.1588282036384,1.56869953835371,4.38417673959782,5.80533958910816,0,0.510281115829547,3.45465465763423,3.08454505380579,1.62567862526312,2.50844886927427,1.01950509218015,0.831076008928724,1.34324852833307,0.219259876645935,0.261435451024901,2.05160100093111,2.62411716559765,2.92840555197873,1.13345112812495,0.457847324091717,1.23764249880882,0,2.60024098414608,4.82051789532479,0.386682873168488,0.924291702687866,0.460511024178389,0.827019434907183,0.107420244868274,0.435050081742686,0.511359764496605,1.24644849905432,2.31398881505369,3.65161127993702,0.255225424989168,0.50578890427775,4.64845549297286,2.51849877464512,0.6970372701606,5.5446044431696,0,1.73986598415015,4.07713282028624,4.43687148900173,2.60510858551767,1.89827654831236,6.67205678733387,0.255897791311334,0,0.318203247925937,7.8494864019923,4.31693898199955,3.0199073270966,2.35624804691373,2.02182481573316,9.5106192703805,4.21258456238981,0.48763373908959,5.36169677188826,2.11300293513511,2.72999822815972,2.2624869112594,0,2.75682671773062,8.62470667813585,3.5076070820301,0.578775534266688,2.62357900818653,3.24656603140326,2.78841148289775,3.3803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| |||
|short_description=p@chr15:63353101..63353147,- | |||
}} |
Latest revision as of 03:12, 25 July 2015
Short description: | p@chr15:63353101..63353147, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:63353101..63353147, - |
Coexpression cluster: | C910_hepatic_smooth_Ewing_Adipocyte_left_Olfactory_umbilical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 5.63e-10 | 32 |
smooth muscle cell | 3.36e-09 | 43 |
smooth muscle myoblast | 3.36e-09 | 43 |
fibroblast | 9.96e-09 | 76 |
mesothelial cell | 3.28e-08 | 19 |
preadipocyte | 5.57e-08 | 12 |
mesodermal cell | 6.67e-08 | 121 |
extraembryonic cell | 5.29e-07 | 19 |
muscle precursor cell | 6.53e-07 | 58 |
myoblast | 6.53e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.53e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
artery | 2.87e-09 | 42 |
arterial blood vessel | 2.87e-09 | 42 |
arterial system | 2.87e-09 | 42 |
systemic artery | 6.10e-09 | 33 |
systemic arterial system | 6.10e-09 | 33 |
splanchnic layer of lateral plate mesoderm | 1.66e-08 | 83 |
muscle tissue | 2.95e-08 | 64 |
musculature | 2.95e-08 | 64 |
musculature of body | 2.95e-08 | 64 |
mesenchyme | 1.10e-07 | 160 |
entire embryonic mesenchyme | 1.10e-07 | 160 |
epithelial tube | 1.19e-07 | 117 |
skeletal muscle tissue | 1.53e-07 | 62 |
striated muscle tissue | 1.53e-07 | 62 |
myotome | 1.53e-07 | 62 |
vasculature | 1.95e-07 | 78 |
vascular system | 1.95e-07 | 78 |
circulatory system | 5.65e-07 | 112 |