FFCP PHASE1:Hg19::chr16:4185999..4186001,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:4185999..4186001,- | |||
|description=CAGE_peak_at_chr16:4185999..4186001,- | |||
|id=chr16:4185999..4186001,- | |||
|ontology_enrichment_celltype=CL:0000632!4.02e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002262;8.69e-10;2!CL:1000398;8.69e-10;2!CL:0002363;1.64e-09;2!CL:0000632;5.80e-07;3!CL:0000081;6.16e-07;11!CL:0000346;7.49e-07;3!CL:1000428;7.49e-07;3!CL:0000775;7.49e-07;3!CL:0000239;9.37e-07;3!CL:1000615;9.37e-07;3!CL:0002306;9.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,8.69e-10,2;CL:1000398,8.69e-10,2;CL:0002363,2.02e-09,2;CL:0000008,2.02e-09,2;CL:0000632,5.80e-07,3;CL:0000081,6.16e-07,11;CL:0000775,7.28e-07,3;CL:0000346,7.70e-07,3;CL:1000428,7.70e-07,3;CL:0000239,8.15e-07,3;CL:1000615,8.15e-07,3;CL:0002306,8.15e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000008;1.64e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000353;1.50e-10;15!UBERON:0001281;8.69e-10;2!UBERON:0003497;8.69e-10;2!UBERON:0003909;8.69e-10;2!UBERON:0003835;8.69e-10;2!UBERON:0003566;1.64e-09;2!UBERON:0001777;1.64e-09;2!UBERON:0001280;6.14e-07;3!UBERON:0004647;6.14e-07;3!UBERON:0000412;7.49e-07;3!UBERON:0001992;7.49e-07;3!UBERON:0006853;9.37e-07;3!UBERON:0007685;9.37e-07;3!UBERON:0004134;9.37e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000353,1.31e-10,15;UBERON:0001281,8.69e-10,2;UBERON:0003497,8.69e-10,2;UBERON:0003909,8.69e-10,2;UBERON:0003835,8.69e-10,2;UBERON:0003566,2.02e-09,2;UBERON:0001777,2.02e-09,2;UBERON:0001280,6.14e-07,3;UBERON:0004647,6.14e-07,3;UBERON:0005171,6.14e-07,3;UBERON:0000412,7.70e-07,3;UBERON:0001992,7.70e-07,3;UBERON:0006853,8.15e-07,3;UBERON:0007685,8.15e-07,3;UBERON:0004134,8.15e-07,3 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0.622822248995575,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443067789167242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0.494533858557114,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57296375277154,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,7.01208869017229,0.4115740113314,8.82052268313252,0,0,0,0,0,0.171567810298526,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0.270946437543853,0,0,1.66215201785745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.73885902670502,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr16:4185999..4186001,- | |||
}} |
Latest revision as of 08:45, 25 July 2015
Short description: | p@chr16:4185999..4186001, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:4185999..4186001, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 8.69e-10 | 2 |
endothelial cell of hepatic sinusoid | 8.69e-10 | 2 |
keratocyte | 2.02e-09 | 2 |
migratory cranial neural crest cell | 2.02e-09 | 2 |
hepatic stellate cell | 5.80e-07 | 3 |
blood cell | 6.16e-07 | 11 |
neutrophil | 7.28e-07 | 3 |
hair follicle dermal papilla cell | 7.70e-07 | 3 |
stem cell of epidermis | 7.70e-07 | 3 |
brush border epithelial cell | 8.15e-07 | 3 |
kidney cortex tubule cell | 8.15e-07 | 3 |
epithelial cell of proximal tubule | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
parenchyma | 1.31e-10 | 15 |
hepatic sinusoid | 8.69e-10 | 2 |
abdomen blood vessel | 8.69e-10 | 2 |
sinusoid | 8.69e-10 | 2 |
abdominal segment blood vessel | 8.69e-10 | 2 |
head connective tissue | 2.02e-09 | 2 |
substantia propria of cornea | 2.02e-09 | 2 |
liver parenchyma | 6.14e-07 | 3 |
liver lobule | 6.14e-07 | 3 |
hepatic duct | 6.14e-07 | 3 |
dermal papilla | 7.70e-07 | 3 |
papillary layer of dermis | 7.70e-07 | 3 |
renal cortex tubule | 8.15e-07 | 3 |
region of nephron tubule | 8.15e-07 | 3 |
proximal tubule | 8.15e-07 | 3 |