FFCP PHASE1:Hg19::chr16:51185489..51185501,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6299 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10524 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NSC2 | |||
|association_with_transcript=-306bp_to_NM_002968,uc010cbv.2,uc010vgs.1_5end | |||
|cluster_id=chr16:51185489..51185501,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_6_at_SALL1_5end | |||
|id=chr16:51185489..51185501,- | |||
|ontology_enrichment_celltype=CL:1000507!2.28e-10!12;CL:1000494!2.28e-10!12;CL:1000497!3.18e-10!18;CL:0002518!3.18e-10!18;CL:0002319!7.01e-09!25;CL:1000449!1.90e-08!16;CL:0002322!2.73e-08!5;CL:0000243!1.20e-07!15;CL:0000125!1.20e-07!15;CL:0000030!1.20e-07!15;CL:0000339!1.20e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002322;6.70e-18;5!CL:1000507;8.62e-12;10!CL:1000494;8.62e-12;10!CL:1000449;1.22e-07;15!CL:0000650;1.41e-07;2!CL:1000500;1.41e-07;2!CL:1000618;1.41e-07;2!CL:1001318;1.41e-07;2!CL:0002173;1.41e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.55e-18,5;CL:1000507,1.90e-11,10;CL:1000494,1.90e-11,10;CL:1000449,2.02e-07,15;CL:0000650,3.62e-07,2;CL:1000500,3.62e-07,2;CL:1000618,3.62e-07,2;CL:1001318,3.62e-07,2;CL:0002173,3.62e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.71e-11;3!UBERON:0003057;1.71e-11;3!UBERON:0006601;1.62e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.68e-45!82;UBERON:0005743!5.84e-42!86;UBERON:0000073!4.30e-39!94;UBERON:0001016!4.30e-39!94;UBERON:0000955!1.24e-38!69;UBERON:0006238!1.24e-38!69;UBERON:0001049!3.09e-38!57;UBERON:0005068!3.09e-38!57;UBERON:0006241!3.09e-38!57;UBERON:0007135!3.09e-38!57;UBERON:0002616!2.51e-30!59;UBERON:0002780!7.20e-29!41;UBERON:0001890!7.20e-29!41;UBERON:0006240!7.20e-29!41;UBERON:0003080!6.40e-28!42;UBERON:0003075!4.81e-26!86;UBERON:0007284!4.81e-26!86;UBERON:0007023!1.26e-25!115;UBERON:0002346!1.97e-25!90;UBERON:0001893!1.19e-24!34;UBERON:0002020!1.51e-24!34;UBERON:0003528!1.51e-24!34;UBERON:0002791!1.47e-23!33;UBERON:0001869!4.58e-22!32;UBERON:0003056!3.22e-18!61;UBERON:0000033!6.57e-18!123;UBERON:0004121!1.30e-17!169;UBERON:0000924!1.51e-17!173;UBERON:0006601!1.51e-17!173;UBERON:0000153!3.65e-17!129;UBERON:0007811!3.65e-17!129;UBERON:0000956!8.12e-17!25;UBERON:0000203!8.12e-17!25;UBERON:0000025!3.23e-15!194;UBERON:0000489!4.89e-14!32;UBERON:0002619!8.15e-14!22;UBERON:0001950!1.56e-13!20;UBERON:0003076!2.96e-11!15;UBERON:0003057!2.96e-11!15;UBERON:0000475!4.61e-11!365;UBERON:0002113!8.46e-11!27;UBERON:0003918!8.46e-11!27;UBERON:0005095!8.46e-11!27;UBERON:0007687!8.46e-11!27;UBERON:0009773!2.28e-10!12;UBERON:0001231!2.28e-10!12;UBERON:0004810!2.28e-10!12;UBERON:0004111!5.63e-10!241;UBERON:0002420!2.15e-09!9;UBERON:0007245!2.15e-09!9;UBERON:0010009!2.15e-09!9;UBERON:0010011!2.15e-09!9;UBERON:0000454!2.15e-09!9;UBERON:0002308!2.41e-09!9;UBERON:0000125!2.41e-09!9;UBERON:0006555!2.67e-09!17;UBERON:0005103!2.67e-09!17;UBERON:0000083!2.67e-09!17;UBERON:0009201!2.67e-09!17;UBERON:0004819!2.67e-09!17;UBERON:0006553!2.67e-09!17;UBERON:0003074!2.67e-09!17;UBERON:0003060!2.67e-09!17;UBERON:0000062!6.91e-09!511;UBERON:0002298!8.73e-09!8;UBERON:0004732!8.90e-09!13;UBERON:0000468!1.31e-08!659;UBERON:0000080!1.33e-08!18;UBERON:0002120!1.33e-08!18;UBERON:0004875!1.33e-08!18;UBERON:0005721!1.33e-08!18;UBERON:0005754!1.33e-08!18;UBERON:0007297!1.33e-08!18;UBERON:0000483!1.68e-08!309;UBERON:0004211!1.90e-08!16;UBERON:0001285!1.90e-08!16;UBERON:0007684!1.90e-08!16;UBERON:0003220!1.90e-08!16;UBERON:0004208!1.90e-08!16;UBERON:0000119!3.16e-08!312;UBERON:0001871!3.35e-08!7;UBERON:0000064!7.21e-08!219;UBERON:0004733!1.05e-07!12;UBERON:0002028!1.05e-07!12;UBERON:0007277!1.05e-07!12;UBERON:0000477!1.09e-07!286;UBERON:0000922!1.35e-07!612;UBERON:0004876!2.00e-07!20;UBERON:0006554!5.32e-07!44;UBERON:0009663!5.32e-07!7;UBERON:0003887!6.34e-07!21;UBERON:0001008!9.91e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.82e-21;53!UBERON:0002616;3.82e-21;53!UBERON:0002780;2.60e-20;41!UBERON:0001890;2.60e-20;41!UBERON:0001893;2.08e-15;34!UBERON:0003528;3.26e-13;34!UBERON:0002020;3.26e-13;34!UBERON:0002791;1.44e-12;32!UBERON:0001869;1.57e-12;32!UBERON:0000489;1.69e-12;29!UBERON:0001894;1.85e-12;7!UBERON:0004211;8.62e-12;10!UBERON:0009773;8.62e-12;10!UBERON:0001231;8.62e-12;10!UBERON:0004810;8.62e-12;10!UBERON:0002240;1.71e-11;3!UBERON:0005174;1.71e-11;3!UBERON:0001137;1.71e-11;3!UBERON:0000956;3.78e-11;25!UBERON:0000203;3.78e-11;25!UBERON:0001016;9.25e-11;83!UBERON:0000955;2.66e-10;68!UBERON:0001017;2.81e-10;75!UBERON:0002298;1.70e-09;6!UBERON:0002784;7.03e-09;4!UBERON:0002619;2.80e-08;22!UBERON:0002113;3.99e-08;24!UBERON:0011143;3.99e-08;24!UBERON:0001897;4.06e-08;2!UBERON:0005162;4.06e-08;2!UBERON:0000122;4.06e-08;2!UBERON:0010225;4.06e-08;2!UBERON:0006555;1.22e-07;15!UBERON:0004819;1.22e-07;15!UBERON:0001285;1.22e-07;15!UBERON:0007684;1.22e-07;15!UBERON:0003567;1.41e-07;2!UBERON:0003838;1.41e-07;2!UBERON:0003586;1.41e-07;2!UBERON:0005169;1.41e-07;2!UBERON:0002321;1.41e-07;2!UBERON:0005215;1.41e-07;2!UBERON:0002303;1.41e-07;2!UBERON:0002319;1.41e-07;2!UBERON:0001950;4.01e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.00e-37,56;UBERON:0005068,1.00e-37,56;UBERON:0006241,1.00e-37,56;UBERON:0007135,1.00e-37,56;UBERON:0000073,6.28e-31,53;UBERON:0002616,6.28e-31,53;UBERON:0001017,3.92e-30,81;UBERON:0001016,1.90e-28,89;UBERON:0002780,6.95e-28,41;UBERON:0001890,6.95e-28,41;UBERON:0003080,6.95e-28,41;UBERON:0006240,6.95e-28,41;UBERON:0003075,1.07e-25,82;UBERON:0007284,1.07e-25,82;UBERON:0000955,1.28e-24,68;UBERON:0006238,1.28e-24,68;UBERON:0002346,3.50e-24,86;UBERON:0010371,2.13e-20,104;UBERON:0003056,3.49e-19,61;UBERON:0001893,1.65e-18,34;UBERON:0007023,5.79e-17,114;UBERON:0003528,4.45e-16,34;UBERON:0002020,4.45e-16,34;UBERON:0010314,6.03e-16,132;UBERON:0002791,1.21e-14,32;UBERON:0000025,2.09e-14,192;UBERON:0001869,2.12e-14,32;UBERON:0001894,1.49e-12,7;UBERON:0006222,1.49e-12,7;UBERON:0004121,2.16e-12,171;UBERON:0000924,2.16e-12,171;UBERON:0006601,2.16e-12,171;UBERON:0002240,1.84e-11,3;UBERON:0005174,1.84e-11,3;UBERON:0001137,1.84e-11,3;UBERON:0004810,1.90e-11,10;UBERON:0000489,2.44e-11,31;UBERON:0000956,3.72e-11,25;UBERON:0000203,3.72e-11,25;UBERON:0003076,8.46e-11,15;UBERON:0003057,8.46e-11,15;UBERON:0004111,7.56e-10,240;UBERON:0002298,9.08e-10,6;UBERON:0011216,2.29e-09,223;UBERON:0002784,5.28e-09,4;UBERON:0000483,1.48e-08,306;UBERON:0000119,2.19e-08,309;UBERON:0002619,2.47e-08,22;UBERON:0001897,2.75e-08,2;UBERON:0010225,2.75e-08,2;UBERON:0005162,4.22e-08,2;UBERON:0000122,4.22e-08,2;UBERON:0004211,2.02e-07,15;UBERON:0009773,2.02e-07,15;UBERON:0001231,2.02e-07,15;UBERON:0001285,2.02e-07,15;UBERON:0007684,2.02e-07,15;UBERON:0004208,2.02e-07,15;UBERON:0002113,3.08e-07,26;UBERON:0003918,3.08e-07,26;UBERON:0011143,3.08e-07,26;UBERON:0005095,3.08e-07,26;UBERON:0007687,3.08e-07,26;UBERON:0003567,3.62e-07,2;UBERON:0003838,3.62e-07,2;UBERON:0003586,3.62e-07,2;UBERON:0005169,3.62e-07,2;UBERON:0002321,3.62e-07,2;UBERON:0005215,3.62e-07,2;UBERON:0002303,3.62e-07,2;UBERON:0002319,3.62e-07,2;UBERON:0001950,4.06e-07,20;UBERON:0006555,6.43e-07,16;UBERON:0004819,6.43e-07,16;UBERON:0000349,6.93e-07,5 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,1.43117993565528,0.410623275218653,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.358779271377724,0,0.211931901159562,0,0,0,0,0,0.194874010322397,0.252433774244115,0,0,0,0.906768884048762,0.508681776931463,0,0,0,2.43947412259191,2.65059536642971,2.20768491452085,1.45125477021519,2.52320850875628,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28685161800217,0,0,0.335032530668698,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0.847168708148562,2.35304930753057,1.46139224653261,1.26661954671451,0,0,0.215915916102139,0,1.08378575017541,1.00337954770971,0.509752546090077,0.831076008928724,2.0148727924996,0,0,0,0,0,1.44257416306811,1.46511143709349,0.990113999047056,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0.409499734223957,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,2.53204949538923,0,0,0,0,0.276283915531148,0,0.409074730008619,0,0,0,0,0,0.295930216910801,0,0,0.969332746095218,0.371072392647405,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.964771509003264,0,0.331737779793674,0,0.438770794307945,0,0,1.38510465306835,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.265372693510018,0,0,0.123563938946503,0,4.51587590970536,0,1.1713222286267,0,0,0,0,0,0.30607276163049,0,0.450970258243478,0,0,0,0,0,0,0.138674673013139,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0.137041924646751,0,0.949661939338181,0,0,0,0,0,0,0.514784993585894,0,0,0,0.135904206073614,0.104602846312333,0.611989305817931,0.577901179803038,0.600420288709789,1.64286454670392,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0.315132729228895,0.741742725430498,0.337017719270924,0,0,0,1.90684768556206,0.482259445395058,0.137539436597234,0,0,0,1.21499113316049,0,5.59520521824307,7.23873316262974,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,3.51725360827398,2.65013777824443,0.775697738169303,2.77688463659649,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0.488105059607853,2.8793914062495,0.573409195690071,2.5513681853476,1.61450647647597,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0.76872455576384,0,0,2.21213497842769,0,0,0,0.327609848846413,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.619678821295011,0,0,0,0,0,0.918736432059601,1.54150140231503,0,1.91560630868582,0.41023272848151,0.756215088665154,0.96820153449905,0.645902582527404,1.42769420259154,0,0,0,0,0,0,1.19349733269765,0.150420656698515,0.80682027481408,0,0,0,0,1.08060135389431,0,1.44680757550829,0.824405532520789,0,0,0,0,0,0,27.2389814997247,0,1.59363533945908,0.266107110487916,0,0,1.63127359144396,0.789273282754189,0,0,0.156986185701028,0.314231179832004,0,0,0.863710364874486,0.47775168788705,0,0.632054446930906,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,1.91107787795487,2.34896406775364,0,0,0,0,0,0,0,0,0,0,1.42922671769058,0.603851374266694,0.0771741581079447,0.218559560503957,0,0,0,1.37415926980462,5.34683520588755,2.5359343655004,0,0,0,0,0,0,0,0,0,2.86679166302903,0.473314686579554,1.01987235286372,0,0,0,0,0,5.29898984307331,0.764859003745869,2.4072715192173,0,0.26721740526556,0.0918948995348449,0,0,0,1.65833887891756,4.3441858261996,0,0.476128862927481,0,0,0,4.83718402914053,0.606351566874658,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.611207220914332,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p6@SALL1 | |||
}} |
Latest revision as of 21:36, 16 September 2015
Short description: | p6@SALL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SALL1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -306bp_to_NM_002968, uc010cbv.2, uc010vgs.1_5end |
EntrezGene: | SALL1 |
HGNC: | 10524 |
UniProt: | Q9NSC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.55e-18 | 5 |
kidney tubule cell | 1.90e-11 | 10 |
nephron tubule epithelial cell | 1.90e-11 | 10 |
epithelial cell of nephron | 2.02e-07 | 15 |
mesangial cell | 3.62e-07 | 2 |
kidney interstitial cell | 3.62e-07 | 2 |
juxtaglomerular complex cell | 3.62e-07 | 2 |
renal interstitial pericyte | 3.62e-07 | 2 |
extraglomerular mesangial cell | 3.62e-07 | 2 |