FFCP PHASE1:Hg19::chr16:67207821..67207836,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8996 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7869 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-33bp_to_ENST00000268605_5end | |||
|cluster_id=chr16:67207821..67207836,+ | |||
|coexpression_cluster_id=C3583 | |||
|description=CAGE_peak_5_at_NOL3_5end | |||
|id=chr16:67207821..67207836,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.68e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.05e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.70e-12;29 | |||
|ontology_enrichment_disease=DOID:305!6.35e-10!106;DOID:0050687!2.18e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.98e-08,106;DOID:0050687,2.15e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.64e-17!115;UBERON:0000064!2.23e-11!219;UBERON:0001049!3.65e-11!57;UBERON:0005068!3.65e-11!57;UBERON:0006241!3.65e-11!57;UBERON:0007135!3.65e-11!57;UBERON:0000481!4.17e-10!347;UBERON:0008947!8.92e-10!38;UBERON:0003258!8.92e-10!38;UBERON:0000475!1.26e-09!365;UBERON:0000062!1.46e-09!511;UBERON:0001004!2.24e-09!72;UBERON:0000468!2.29e-09!659;UBERON:0000065!4.07e-09!53;UBERON:0003075!9.42e-09!86;UBERON:0007284!9.42e-09!86;UBERON:0004121!9.46e-09!169;UBERON:0000033!1.10e-08!123;UBERON:0000924!1.13e-08!173;UBERON:0006601!1.13e-08!173;UBERON:0002780!1.34e-08!41;UBERON:0001890!1.34e-08!41;UBERON:0006240!1.34e-08!41;UBERON:0002346!1.55e-08!90;UBERON:0002616!3.38e-08!59;UBERON:0000153!4.08e-08!129;UBERON:0007811!4.08e-08!129;UBERON:0003080!4.09e-08!42;UBERON:0000477!5.27e-08!286;UBERON:0002020!1.40e-07!34;UBERON:0003528!1.40e-07!34;UBERON:0000072!1.46e-07!46;UBERON:0000480!1.69e-07!626;UBERON:0001737!1.95e-07!9;UBERON:0000467!2.08e-07!625;UBERON:0000955!4.85e-07!69;UBERON:0006238!4.85e-07!69;UBERON:0002050!4.90e-07!605;UBERON:0005423!4.90e-07!605;UBERON:0001893!5.68e-07!34;UBERON:0000922!5.75e-07!612;UBERON:0000923!8.25e-07!604;UBERON:0005291!8.25e-07!604;UBERON:0006598!8.25e-07!604;UBERON:0002532!8.25e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.69e-19;9!UBERON:0001557;2.69e-19;9!UBERON:0000072;1.31e-13;37!UBERON:0000065;2.94e-09;44!UBERON:0004151;4.37e-08;3!UBERON:0000988;3.78e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.71e-19,9;UBERON:0008947,2.90e-13,38;UBERON:0003258,2.90e-13,38;UBERON:0000072,1.02e-12,47;UBERON:0001557,3.37e-12,19;UBERON:0000065,1.96e-10,54;UBERON:0004151,2.87e-08,3;UBERON:0001004,3.38e-08,74;UBERON:0000988,1.65e-07,3;UBERON:0001041,5.23e-07,87 | |||
|phase1_expression=0.54503513781167,2.99740733447376,0.281908808191942,1.0007329835313,0,2.61701557230111,0,0,0.783556884599516,0.245733936501509,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0.273748850145768,0.251085279189606,0,0,0.0787107813136792,0,0,0.154816123316076,2.75826367343678,0,0.369754010166788,0,0,0,0,0,0,0,0.32389366601898,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.579386075843295,0,0.486634870302636,0,0,0,0.327447688744282,0.728590576585084,1.11235332835329,0,0.174129737299267,0.132957960518865,0,0.571994910780128,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0.33472061276467,0,0.760272105718513,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,1.3082821564276,0,0.25326102332916,0,0,0.709336764396714,0,0,0.24666754841716,0,0,0,0,0,0,0.624320153660641,0,0,0,0.161872944368132,0.140450806702248,0.61246251376468,0,0.413303124703062,0,0,0,0,0,0.500474079487857,0.277064115484183,0.438977620880838,0.30648779579902,0.150238058906597,0,0,0,0,0.300091096084402,0,0.515281080091258,0,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0.57978255948989,0.272746120590835,0.286804595389004,0,0,0.232387885739037,0.207322110030741,0,0,0,1.28648187638577,1.38134921352481,0.464367928031979,0,2.12952240071719,2.36018566109342,1.92808823906786,1.7647035637183,2.17879444092406,1.18635309555548,1.07865046528132,1.17732879075208,1.15424147083917,0,0,0,0,0,0,0,0,0,0.343135620597051,0.329250856225877,0,0,0.462942225792648,0,1.03993478527958,0,0.231860809950154,0,0,0,0.190254152234598,0,1.71697232418975,0,0,0,0.93733833986777,0,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,0,0.432359860250884,0.25248486685276,0.190493682876507,0,0,0,0.102827492703324,0.300343057843917,0.571652865261156,0,0,0,0.129271715757778,0,0,0,0,0.514414748524284,0,0.799266537048298,0.428933980974443,0,0,0.325736184293735,0.355391948742546,0.791951872933429,0,0,0.099972991182057,0,0,0,0.958499421966331,3.44585807502342,0,0.579125226670317,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.415941723061614,0,0.315404830067869,0.117141414992713,0.601892199455438,0,0,0,0,0,0.587403472388222,0,0,0,0,0.606255142892519,0,0,0,0.920771839728375,0.280660094433074,0.384417447767103,1.02341449813341,0.160853921143607,2.96836132889982,0,0.177561725313127,0.0821271560138091,0,0,0,1.40354529212299,0.276242966807689,0,0,0,0,0.15403067420883,0.784349769176855,0,0,0,0,0.215915916102139,0,0.541892875087706,0,0.509752546090077,0,0.223874754722178,0,0,0,0.656029291399411,0.325378394664303,0.309123034943167,0.732555718546747,0.495056999523528,0,0.650060246036521,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0.330569830721956,0.384380134730212,0.765676274967505,0.6069466851333,1.39453664789186,0.31481234683064,0,0.308033580176089,0,0,0.37064843820784,0.429374660225974,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.876901770507525,0,0,0.811641507850816,0,0,0.286822704408103,0.294747123039363,0.35667105148125,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0.288666338176536,2.01090682660736,1.08890984861323,0.188287601553558,0.86101074534246,0,0.886860307073351,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0.439524537815682,0.121360521749513,0.111443384277478,0.284136146806413,1.90995587790152,2.37571744666111,6.75753544618311,0,0.984685914873589,0,0.494411622680279,0,0.398495976502139,0,0,0.20453736500431,0,0.622079175323615,0.0898683511473268,0.537063524026827,0,0.197286811273867,0,0,0,0.834912883456661,0,0.520855522170466,1.74919999992391,0,0.568967241427498,0.508507300585533,0.709163045303809,0,0.291604613383254,0.173624994933292,0.885741385813839,1.08536794762867,1.52581736317083,0.884634079449797,0.886642856860642,0.438770794307945,0.871507708151921,0.278847488557207,0.230850775511391,0.113942055847001,0,0,0,1.5950057986596,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0.296521128680622,0.123563938946503,0.522109747527277,0.202203398942031,0,0.702793337176017,0,0,2.42780379534093,0.394584402849391,0,0,0,0,0,0,0,0.313932918407225,0,0,1.38674673013139,0.173559738335131,0.685946781900644,1.13176968554523,0.17472666824203,1.54787429224455,1.45134496933628,2.11959019549938,2.05288642633023,0.775912131907355,0.0882561266915003,1.12990370390266,0.411125773940253,0.19871461170299,0.50648636764703,0.391102765469606,0.400794101257669,1.06726497369676,0.599428828746391,0.288180834308212,0,0,0.14405479798815,0.49701014226173,1.88555227693436,0,0,1.01998217636322,0,0.600420288709789,0.684526894459965,0,0,0,0,1.60412296808179,1.43574604915363,2.1964690054889,3.004582336956,2.67805748930247,0.134366944973453,0,0,0,0,0.0674035438541849,0.393709926058995,0,0.795229689809303,1.0896272488926,0.160753148465019,0.137539436597234,0,0,0,0.728994679896296,1.0063040627978,0.551639951094387,0.209818352539992,0.422401346077626,6.99220623398095,0,2.85878130549347,3.97255182219259,0.5085370753095,0,1.72844298240254,0.653174720218818,0,0,0.511164065356265,1.24643300672138,0.146552233678082,0,1.93924434542326,1.3223260174269,0.855434189421647,1.40963004463334,0.427149650270779,0.471612915298998,0.414239055347196,0,0.197611631897944,0,0.638341257770182,5.98419583706421,3.2589686222951,3.06345576763462,1.96723578425883,0,0.886068179966986,0.610131324509816,0.500763722825999,0,1.10929051536852,0.993542447062135,0.138348634936231,0.37494122388632,0,0.285465333544967,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0.443565449968902,0.63718706865481,0.449803112163605,0,0,0.53168342911599,0,0.300515217994437,0.761610424337591,0.813741466409323,0,0.107410557042488,0.464033759878494,0,0.400027764663154,0,0,0,0.385239660814607,0.214441591374926,0.521988583930423,0.226705925512272,0,0.489473409012935,0,0,0.219284049578707,0.176689145945881,0,0.506827321959218,0,2.07258205038719,0.303859956177382,0.967809053062115,0.194860308839388,0,0.163565394255844,0.327609848846413,0.737318726261158,0,1.39991177098451,0.106691729694141,0.344429959321631,1.70254786070051,0.184105950251841,0.839277046316667,0,0.383683113910955,1.72519698234691,0.157265941855896,1.20130602011215,0.33946505990805,0,0.619678821295011,0,0,0,2.40171224485641,0.352675943690684,0.918736432059601,0.513833800771676,0,1.27707087245721,0.615349092722265,0.252071696221718,0.760729777106397,0.968853873791107,0,0.490738592505128,0,0.183428598521679,0.231051332300676,0.381382095467167,0,1.39241355481392,0.300841313397029,0,0,0,0.982631505060581,0.147856086217045,0.810451015420736,0,1.03343398250592,0.570742291745161,0,2.19303106742873,0.992422356778588,0,0.383287282918786,0.535701835878287,0,0.606965604236632,0.682986574053893,0.0887023701626388,0,0.685952037749674,1.42736439251347,0.986591603442736,1.18193840883968,0.778619813244484,0.39246546425257,0.785577949580009,0.560544326627578,0,1.07963795609311,2.38875843943525,0.929195074296532,0,0,0,0,0.62164849248911,0.6828739083758,0,1.29068207646083,0,0.0852134047591577,0.423387050190929,0.68732060563215,0.93061915699296,0,0.111855431797792,0.294450700845729,0.121917924982269,3.88457302312737,1.84793052341245,0,0.485710993059139,0,0.596852325484105,1.9027214524411,0,0,1.05673990496671,0.231522474323834,0,0.470317296361523,0.490296643507811,0.235676547101626,0.981542335574726,1.48523200163543,0.8453114551668,0.169927114687817,0,0.128915775947154,0,0.71421575442263,0,0.481448200135009,0,0.917458566809082,1.29005624836306,0.157771562193185,0.883889372481891,0,0,0,0.462175628631418,0,0,0,0.126698501011437,0,0,0.18378979906969,0,0.454672189309436,0,1.65833887891756,0.827463966895162,1.91910583710883,0,0.193766729508018,0,0.784923038064294,0.445530107947154,0.202117188958219,1.30630048738177,1.71116650542641,0.740872583160463,0.502055437748735,0.99798106963804,0.244209805832924,0.106727345877715,0,1.07790242527904,0,0.244482888365733,0.813792356631477,0,0.402547587182052,0 | |||
|short_description=p5@NOL3 | |||
}} |
Latest revision as of 09:57, 17 September 2015
Short description: | p5@NOL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NOL3_5end |
Coexpression cluster: | C3583_large_mature_amniotic_heart_renal_Esophageal_breast |
Association with transcript: | -33bp_to_ENST00000268605_5end |
EntrezGene: | NOL3 |
HGNC: | 7869 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.05e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.71e-19 | 9 |
respiratory primordium | 2.90e-13 | 38 |
endoderm of foregut | 2.90e-13 | 38 |
segment of respiratory tract | 1.02e-12 | 47 |
upper respiratory tract | 3.37e-12 | 19 |
respiratory tract | 1.96e-10 | 54 |
cardiac chamber | 2.87e-08 | 3 |
respiratory system | 3.38e-08 | 74 |
pons | 1.65e-07 | 3 |
foregut | 5.23e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.98e-08 | 106 |
cell type cancer | 2.15e-08 | 143 |