FFCP PHASE1:Hg19::chr17:31624987..31624990,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:31624987..31624990,+ | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_at_chr17:31624987..31624990,+ | |||
|id=chr17:31624987..31624990,+ | |||
|ontology_enrichment_celltype=CL:0002601!2.52e-08!1;CL:0000946!9.29e-08!1;CL:0000786!9.29e-08!1;CL:0000980!9.29e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.83e-14;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!2.25e-17!10;DOID:3095!9.04e-08!22;DOID:2994!9.04e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:171;1.10e-59;10!DOID:3193;7.05e-34;2!DOID:962;7.05e-34;2!DOID:3095;7.08e-28;22!DOID:2994;7.08e-28;22!DOID:1192;4.09e-23;3!DOID:169;2.74e-12;6!DOID:3093;8.38e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.10e-59,10;DOID:3193,7.05e-34,2;DOID:962,7.05e-34,2;DOID:3095,7.08e-28,22;DOID:2994,7.08e-28,22;DOID:1192,4.09e-23,3;DOID:169,2.74e-12,6;DOID:3093,8.38e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0002298!2.51e-20!8;UBERON:0000988!5.31e-20!3;UBERON:0003076!2.62e-15!15;UBERON:0003057!2.62e-15!15;UBERON:0002148!4.94e-14!2;UBERON:0009662!4.94e-14!2;UBERON:0004733!1.65e-13!12;UBERON:0002028!1.65e-13!12;UBERON:0007277!1.65e-13!12;UBERON:0004732!1.85e-12!13;UBERON:0002308!8.74e-12!9;UBERON:0000125!8.74e-12!9;UBERON:0001049!1.01e-11!57;UBERON:0005068!1.01e-11!57;UBERON:0006241!1.01e-11!57;UBERON:0007135!1.01e-11!57;UBERON:0002346!1.43e-11!90;UBERON:0000073!1.07e-10!94;UBERON:0001016!1.07e-10!94;UBERON:0001896!7.18e-10!3;UBERON:0005290!7.18e-10!3;UBERON:0010096!7.18e-10!3;UBERON:0006331!1.17e-09!3;UBERON:0002616!3.14e-09!59;UBERON:0001017!4.57e-09!82;UBERON:0000924!9.26e-09!173;UBERON:0006601!9.26e-09!173;UBERON:0005743!1.48e-08!86;UBERON:0002020!2.26e-08!34;UBERON:0003528!2.26e-08!34;UBERON:0001874!5.40e-08!1;UBERON:0006834!8.69e-08!1;UBERON:0001882!1.14e-07!1;UBERON:0005403!1.14e-07!1;UBERON:0000955!1.51e-07!69;UBERON:0006238!1.51e-07!69;UBERON:0000369!2.00e-07!4;UBERON:0002435!2.00e-07!4;UBERON:0000204!2.00e-07!4;UBERON:0010082!2.00e-07!4;UBERON:0003075!3.50e-07!86;UBERON:0007284!3.50e-07!86;UBERON:0007023!3.71e-07!115;UBERON:0002680!5.14e-07!9;UBERON:0001895!5.14e-07!9;UBERON:0010092!5.14e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.40e-66;4!UBERON:0000923;2.40e-66;4!UBERON:0010316;2.40e-66;4!UBERON:0005291;2.40e-66;4!UBERON:0002050;2.19e-53;5!UBERON:0005423;2.19e-53;5!UBERON:0003714;7.05e-34;2!UBERON:0000013;1.83e-14;5!UBERON:0002410;1.83e-14;5!UBERON:0000010;1.21e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,7.05e-34,2;UBERON:0000013,1.83e-14,5;UBERON:0002410,1.83e-14,5;UBERON:0000010,1.21e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471797825567689,0,0.169732529954025,3.61377364172861,4.46168751332408,2.23457967189298,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p@chr17:31624987..31624990,+ | |||
}} |
Latest revision as of 15:30, 25 July 2015
Short description: | p@chr17:31624987..31624990, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:31624987..31624990, + |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tissue | 7.05e-34 | 2 |
sympathetic nervous system | 1.83e-14 | 5 |
autonomic nervous system | 1.83e-14 | 5 |
peripheral nervous system | 1.21e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.10e-59 | 10 |
peripheral nerve sheath neoplasm | 7.05e-34 | 2 |
neurofibroma | 7.05e-34 | 2 |
germ cell and embryonal cancer | 7.08e-28 | 22 |
germ cell cancer | 7.08e-28 | 22 |
peripheral nervous system neoplasm | 4.09e-23 | 3 |
neuroendocrine tumor | 2.74e-12 | 6 |
nervous system cancer | 8.38e-07 | 11 |