FFCP PHASE1:Hg19::chr17:37856184..37856193,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2064 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3430 | |||
|TSSclassifier=strong | |||
|UniProt=B4DTR1 | |||
|association_with_transcript=-35bp_to_ENST00000445658_5end | |||
|cluster_id=chr17:37856184..37856193,+ | |||
|coexpression_cluster_id=C412 | |||
|description=CAGE_peak_6_at_ERBB2_5end | |||
|id=chr17:37856184..37856193,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.20e-12!254;CL:0000223!4.39e-08!59;CL:0002076!5.97e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002577;1.48e-10;3!CL:0000349;2.44e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.30e-10,3;CL:0000349,3.22e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.66e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:3451;2.85e-07;2!DOID:4159;2.85e-07;2!DOID:114;2.85e-07;2!DOID:0060122;2.85e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3451,3.07e-07,2;DOID:4159,3.07e-07,2;DOID:0060122,3.07e-07,2;DOID:114,4.22e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.33e-13!169;UBERON:0000925!1.33e-13!169;UBERON:0006595!1.33e-13!169;UBERON:0000062!2.74e-11!511;UBERON:0001007!2.98e-11!155;UBERON:0001555!2.98e-11!155;UBERON:0007026!2.98e-11!155;UBERON:0000468!1.20e-10!659;UBERON:0000077!2.25e-10!130;UBERON:0004921!6.32e-09!129;UBERON:0004185!6.32e-09!129;UBERON:0000481!2.33e-08!347;UBERON:0000161!3.48e-08!35;UBERON:0005911!6.30e-08!82;UBERON:0000467!7.19e-08!625;UBERON:0000480!9.85e-08!626;UBERON:0000475!1.15e-07!365;UBERON:0004175!5.49e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;9.37e-14;4!UBERON:0000478;2.29e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,1.23e-16,7;UBERON:0001987,8.45e-14,4;UBERON:0004340,8.45e-14,4;UBERON:0005631,2.09e-13,14;UBERON:0000158,2.09e-13,14;UBERON:0004175,1.61e-07,25;UBERON:0000478,2.97e-07,24;UBERON:0000995,4.37e-07,21 | |||
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|short_description=p6@ERBB2 | |||
}} |
Latest revision as of 22:33, 19 September 2015
Short description: | p6@ERBB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ERBB2_5end |
Coexpression cluster: | C412_serous_breast_papillotubular_ductus_seminal_kidney_clear |
Association with transcript: | -35bp_to_ENST00000445658_5end |
EntrezGene: | ERBB2 |
HGNC: | 3430 |
UniProt: | B4DTR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.30e-10 | 3 |
extraembryonic cell | 3.22e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
chorion | 1.23e-16 | 7 |
placenta | 8.45e-14 | 4 |
allantois | 8.45e-14 | 4 |
extraembryonic membrane | 2.09e-13 | 14 |
membranous layer | 2.09e-13 | 14 |
internal genitalia | 1.61e-07 | 25 |
extraembryonic structure | 2.97e-07 | 24 |
uterus | 4.37e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
skin carcinoma | 3.07e-07 | 2 |
skin cancer | 3.07e-07 | 2 |
integumentary system cancer | 3.07e-07 | 2 |
heart disease | 4.22e-07 | 2 |