FFCP PHASE1:Hg19::chr17:39673166..39673191,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:39673166..39673191,- | |||
|coexpression_cluster_id=C1777 | |||
|description=CAGE_peak_at_chr17:39673166..39673191,- | |||
|id=chr17:39673166..39673191,- | |||
|ontology_enrichment_celltype=CL:0002076!1.15e-35!43;CL:0000223!1.06e-27!59;CL:0002251!2.97e-16!21;CL:0002368!8.92e-16!13;CL:0000066!5.45e-10!254;CL:0002202!8.43e-09!9;CL:0002632!8.43e-09!9;CL:0002621!2.83e-08!3;CL:0002328!8.27e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000575;2.41e-17;2!CL:0002621;4.33e-12;3!CL:0002231;6.96e-12;3!CL:0002252;1.55e-09;1!CL:0002327;2.73e-09;4!CL:0002076;2.33e-08;42!CL:0002251;6.52e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,5.54e-17,2;CL:0002621,4.22e-12,3;CL:0002231,6.23e-12,3;CL:0002252,1.76e-09,1;CL:0002327,2.36e-09,4;CL:0002076,6.38e-09,42;CL:0002251,6.62e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0009143;5.78e-10;1!UBERON:0004874;1.55e-09;1 | |||
|ontology_enrichment_disease=DOID:1749!2.56e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;4.46e-10;1!DOID:3149;4.46e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.46e-10,1;DOID:3149,4.46e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!3.12e-19!72;UBERON:0000161!2.14e-17!35;UBERON:0000166!1.28e-16!21;UBERON:0000165!1.25e-13!28;UBERON:0000930!1.25e-13!28;UBERON:0004119!1.56e-13!169;UBERON:0000925!1.56e-13!169;UBERON:0006595!1.56e-13!169;UBERON:0000065!4.27e-12!53;UBERON:0003102!5.00e-12!95;UBERON:0001007!5.09e-12!155;UBERON:0001555!5.09e-12!155;UBERON:0007026!5.09e-12!155;UBERON:0003729!9.18e-12!5;UBERON:0000974!9.72e-11!10;UBERON:0005153!1.47e-10!37;UBERON:0003343!1.00e-09!4;UBERON:0004785!1.00e-09!4;UBERON:0007196!1.95e-09!14;UBERON:0001558!1.95e-09!14;UBERON:0005157!4.53e-09!51;UBERON:0001444!5.81e-09!48;UBERON:0005178!1.06e-08!34;UBERON:0002224!1.06e-08!34;UBERON:0005181!2.29e-08!35;UBERON:0001949!2.83e-08!3;UBERON:0001723!3.60e-08!3;UBERON:0001033!3.60e-08!3;UBERON:0010056!3.60e-08!3;UBERON:0000077!5.79e-08!130;UBERON:0004815!8.27e-08!3;UBERON:0002031!8.27e-08!3;UBERON:0004921!3.04e-07!129;UBERON:0004185!3.04e-07!129;UBERON:0006562!5.13e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001043;3.66e-12;3!UBERON:0001723;3.66e-12;3!UBERON:0001033;3.66e-12;3!UBERON:0001949;4.33e-12;3!UBERON:0000997;4.08e-10;1!UBERON:0005056;4.08e-10;1!UBERON:0004176;4.08e-10;1!UBERON:0007029;1.55e-09;1!UBERON:0000989;1.55e-09;1!UBERON:0008811;1.55e-09;1!UBERON:0000014;2.13e-09;4!UBERON:0001911;2.73e-09;4!UBERON:0000964;3.89e-09;4!UBERON:0010409;3.89e-09;4!UBERON:0000165;2.16e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001043,3.77e-12,3;UBERON:0009143,3.77e-12,3;UBERON:0001949,4.22e-12,3;UBERON:0001723,5.58e-12,3;UBERON:0001033,5.58e-12,3;UBERON:0010056,5.58e-12,3;UBERON:0000161,1.35e-10,36;UBERON:0000997,4.09e-10,1;UBERON:0005056,4.09e-10,1;UBERON:0007029,9.70e-10,1;UBERON:0000989,1.36e-09,1;UBERON:0008811,1.36e-09,1;UBERON:0006258,1.36e-09,1;UBERON:0005876,1.36e-09,1;UBERON:0004874,1.36e-09,1;UBERON:0000014,1.69e-09,4;UBERON:0000166,2.09e-09,22;UBERON:0001911,2.36e-09,4;UBERON:0005333,2.36e-09,4;UBERON:0008425,2.36e-09,4;UBERON:0005311,2.36e-09,4;UBERON:0000964,5.87e-09,4;UBERON:0010409,5.87e-09,4;UBERON:0004348,5.87e-09,4;UBERON:0005427,5.87e-09,4;UBERON:0003102,2.47e-08,99;UBERON:0000153,1.54e-07,62;UBERON:0007811,1.54e-07,62;UBERON:0001444,1.60e-07,49;UBERON:0000165,4.34e-07,29;UBERON:0000930,4.34e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,5.58240934377942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09288586487763,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,2.70565194428616,0.272746120590835,1.43402297694502,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.804231779293047,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.358234090811393,1.74380363108377,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60405176242628,1.38121483403844,0,0.182091168006717,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.826424576804891,0.576570202095319,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0,1.67308493134324,0.692552326534174,0,0.69169171316418,0.359030577639089,0.108647371922008,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0,0,0,0,0,0,0,1.13843818411917,0,0,8.3293537802221,0.0870592065804026,0,0,0,0,0,3.87956065953678,0,0.677942222341597,0,0,0,0.195551382734803,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.04412843958459,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.235939446695481,15.2245736772994,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.828864656652147,0.6828739083758,0,0,0,0.0852134047591577,0,0.68732060563215,0.31020638566432,0,0,0,0,0,0,0,1.94284397223656,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75369840303351,0,0,0,0,0,0,0,3.62497769231668,0.714193294391221,0,0.0620747142958579,0,0,0,3.26575121845442,1.02669990325584,0.5388164241167,0.143444410785353,1.99596213927608,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr17:39673166..39673191,- | |||
}} |
Latest revision as of 16:42, 25 July 2015
Short description: | p@chr17:39673166..39673191, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39673166..39673191, - |
Coexpression cluster: | C1777_keratoacanthoma_esophagus_oral_Mammary_cervical_epidermoid_Corneal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 5.54e-17 | 2 |
gingival epithelial cell | 4.22e-12 | 3 |
epithelial cell of prostate | 6.23e-12 | 3 |
epithelial cell of esophagus | 1.76e-09 | 1 |
mammary gland epithelial cell | 2.36e-09 | 4 |
endo-epithelial cell | 6.38e-09 | 42 |
epithelial cell of alimentary canal | 6.62e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
esophagus | 3.77e-12 | 3 |
esophageal region | 3.77e-12 | 3 |
gingival epithelium | 4.22e-12 | 3 |
tongue | 5.58e-12 | 3 |
gustatory system | 5.58e-12 | 3 |
future tongue | 5.58e-12 | 3 |
orifice | 1.35e-10 | 36 |
mammalian vulva | 4.09e-10 | 1 |
external female genitalia | 4.09e-10 | 1 |
surface | 9.70e-10 | 1 |
penis | 1.36e-09 | 1 |
intromittent organ | 1.36e-09 | 1 |
lateral plate mesenchyme | 1.36e-09 | 1 |
undifferentiated genital tubercle | 1.36e-09 | 1 |
somatopleure | 1.36e-09 | 1 |
zone of skin | 1.69e-09 | 4 |
oral opening | 2.09e-09 | 22 |
mammary gland | 2.36e-09 | 4 |
mammary bud | 2.36e-09 | 4 |
mammary ridge | 2.36e-09 | 4 |
mammary placode | 2.36e-09 | 4 |
cornea | 5.87e-09 | 4 |
eye surface | 5.87e-09 | 4 |
optic eminence | 5.87e-09 | 4 |
corneal primordium | 5.87e-09 | 4 |
surface structure | 2.47e-08 | 99 |
anterior region of body | 1.54e-07 | 62 |
craniocervical region | 1.54e-07 | 62 |
subdivision of head | 1.60e-07 | 49 |
mouth | 4.34e-07 | 29 |
stomodeum | 4.34e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.46e-10 | 1 |
keratoacanthoma | 4.46e-10 | 1 |