FFCP PHASE1:Hg19::chr17:39942327..39942355,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3728 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6207 | |||
|TSSclassifier=strong | |||
|UniProt=C9JKY1 | |||
|association_with_transcript=-5bp_to_ENST00000449889_5end | |||
|cluster_id=chr17:39942327..39942355,- | |||
|description=CAGE_peak_4_at_JUP_5end | |||
|id=chr17:39942327..39942355,- | |||
|ontology_enrichment_celltype=CL:0000066!1.87e-20!254;CL:0002078!5.70e-12!44;CL:0000222!1.49e-11!119;CL:0000115!2.61e-11!35;CL:0000220!3.74e-10!246;CL:0002139!6.28e-10!24;CL:0002321!6.48e-10!248;CL:0000012!1.91e-09!682;CL:0000076!6.59e-09!62;CL:0000548!6.89e-09!679;CL:0000004!6.89e-09!679;CL:0000255!6.89e-09!679;CL:0000213!2.23e-08!57;CL:0000215!2.23e-08!57;CL:0000071!7.16e-08!18;CL:0002546!7.16e-08!18;CL:0000359!9.27e-08!32;CL:0002076!2.62e-07!43;CL:1000449!2.82e-07!16;CL:1000497!4.09e-07!18;CL:0002518!4.09e-07!18;CL:0000192!5.33e-07!42;CL:0000514!5.33e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.52e-12;24!CL:0000115;1.70e-11;36!CL:0002078;4.04e-10;45!CL:1000449;5.88e-10;15!CL:0000071;1.99e-09;18!CL:1000497;6.03e-09;17!CL:0002518;6.03e-09;17!CL:0002681;1.11e-08;12!CL:0002584;1.11e-08;12!CL:0000359;1.34e-07;32!CL:0000213;2.95e-07;58!CL:0000215;2.95e-07;58!CL:1000507;6.84e-07;10!CL:1000494;6.84e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.19e-19,253;CL:0002078,6.59e-15,45;CL:0000115,4.52e-14,36;CL:0002139,5.50e-12,24;CL:0000222,5.63e-12,121;CL:0000213,1.72e-10,58;CL:0000215,1.72e-10,58;CL:1000449,4.39e-10,15;CL:0000071,1.99e-09,18;CL:0002546,1.99e-09,18;CL:0002321,2.90e-09,250;CL:1000497,5.13e-09,17;CL:0002518,5.13e-09,17;CL:0002681,8.80e-09,12;CL:0002584,8.80e-09,12;CL:0000076,3.36e-08,63;CL:0000359,9.75e-08,32;CL:1000507,7.15e-07,10;CL:1000494,7.15e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002546;1.99e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.45e-16!79;UBERON:0007798!1.45e-16!79;UBERON:0000055!2.42e-14!69;UBERON:0001981!8.54e-14!60;UBERON:0007500!8.54e-14!60;UBERON:0004537!8.54e-14!60;UBERON:0006965!8.54e-14!60;UBERON:0003914!3.88e-13!118;UBERON:0004872!5.44e-12!84;UBERON:0001009!3.90e-11!113;UBERON:0001637!6.19e-11!42;UBERON:0003509!6.19e-11!42;UBERON:0004572!6.19e-11!42;UBERON:0004535!1.64e-10!110;UBERON:0003081!3.65e-09!216;UBERON:0001008!1.77e-08!45;UBERON:0006554!2.07e-08!44;UBERON:0001986!7.16e-08!18;UBERON:0004638!7.16e-08!18;UBERON:0004852!7.16e-08!18;UBERON:0000926!8.78e-08!448;UBERON:0004120!8.78e-08!448;UBERON:0006603!8.78e-08!448;UBERON:0000477!1.39e-07!286;UBERON:0004573!1.53e-07!33;UBERON:0004571!1.53e-07!33;UBERON:0003104!2.29e-07!238;UBERON:0009142!2.29e-07!238;UBERON:0004211!2.82e-07!16;UBERON:0001285!2.82e-07!16;UBERON:0007684!2.82e-07!16;UBERON:0003220!2.82e-07!16;UBERON:0004208!2.82e-07!16;UBERON:0000490!3.46e-07!138;UBERON:0003064!5.05e-07!37;UBERON:0006555!5.78e-07!17;UBERON:0005103!5.78e-07!17;UBERON:0000083!5.78e-07!17;UBERON:0009201!5.78e-07!17;UBERON:0004819!5.78e-07!17;UBERON:0006553!5.78e-07!17;UBERON:0003074!5.78e-07!17;UBERON:0003060!5.78e-07!17;UBERON:0003103!6.38e-07!69;UBERON:0000467!7.71e-07!625;UBERON:0001004!8.37e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;5.88e-10;15!UBERON:0004819;5.88e-10;15!UBERON:0001285;5.88e-10;15!UBERON:0007684;5.88e-10;15!UBERON:0003914;1.69e-09;74!UBERON:0004638;1.99e-09;18!UBERON:0001986;1.99e-09;18!UBERON:0004852;1.99e-09;18!UBERON:0001637;6.92e-09;42!UBERON:0003509;6.92e-09;42!UBERON:0004572;6.92e-09;42!UBERON:0006554;7.11e-09;30!UBERON:0001008;7.11e-09;30!UBERON:0000353;1.07e-08;15!UBERON:0001225;1.11e-08;12!UBERON:0008987;1.11e-08;12!UBERON:0002049;6.91e-08;75!UBERON:0007798;6.91e-08;75!UBERON:0000490;8.05e-08;33!UBERON:0007500;1.06e-07;56!UBERON:0001981;1.06e-07;56!UBERON:0004537;1.06e-07;56!UBERON:0000487;1.12e-07;22!UBERON:0001737;1.22e-07;9!UBERON:0001557;1.22e-07;9!UBERON:0000055;4.36e-07;65!UBERON:0001851;4.84e-07;15!UBERON:0006914;6.77e-07;25!UBERON:0004211;6.84e-07;10!UBERON:0009773;6.84e-07;10!UBERON:0001231;6.84e-07;10!UBERON:0004810;6.84e-07;10!UBERON:0000025;9.36e-07;93 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.79e-15,78;UBERON:0007798,1.79e-15,78;UBERON:0000055,9.19e-14,68;UBERON:0007500,7.35e-13,59;UBERON:0001981,7.35e-13,59;UBERON:0004537,7.35e-13,59;UBERON:0006965,7.35e-13,59;UBERON:0003914,8.10e-13,117;UBERON:0001637,5.76e-11,42;UBERON:0003509,5.76e-11,42;UBERON:0004572,5.76e-11,42;UBERON:0004872,1.69e-10,83;UBERON:0001009,3.28e-10,112;UBERON:0004211,4.39e-10,15;UBERON:0009773,4.39e-10,15;UBERON:0001231,4.39e-10,15;UBERON:0001285,4.39e-10,15;UBERON:0007684,4.39e-10,15;UBERON:0004208,4.39e-10,15;UBERON:0004535,1.63e-09,109;UBERON:0004638,1.99e-09,18;UBERON:0001986,1.99e-09,18;UBERON:0004852,1.99e-09,18;UBERON:0006555,4.61e-09,16;UBERON:0004819,4.61e-09,16;UBERON:0001225,8.80e-09,12;UBERON:0008987,8.80e-09,12;UBERON:0000353,9.19e-09,15;UBERON:0001008,3.25e-08,48;UBERON:0006554,4.08e-08,47;UBERON:0000487,1.08e-07,22;UBERON:0001737,1.52e-07,9;UBERON:0001851,4.72e-07,15;UBERON:0004573,5.24e-07,33;UBERON:0004571,5.24e-07,33;UBERON:0006914,6.29e-07,25;UBERON:0004810,7.15e-07,10 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0,5.89761447603621,16.0494268633658,1.74753097704138,2.63766978228454,3.58922423584135,2.31978163009541,3.36162573225888,2.41077811209591,4.38186054232424,3.90346239032406,0.61560529038394,1.42800483870977,0.626909442956176,0.286235987131057,0.410623275218653,0,0.229240217243854,0.246301768349837,0.157421562627358,0.393364276848904,0,10.217864138861,9.19421224478927,8.13255980701275,7.76483421350254,0,0,1.17440175733939,0.553995408531877,8.42286679374595,1.08505435357926,0.223915474239924,0,0.515151135268373,0.290796477559129,1.51150377475524,13.5847074265177,0,0.411167888021826,1.85823822537062,0,0,3.07426898855161,0.344745680736619,0.645484683583826,1.35426486594342,0,0,2.9214052977861,0.306083892370903,0.320929027076094,3.83602275479425,0,0.199463657621632,4.26224750532694,0,0.56738522469114,3.73693349397345,0.251248665256743,1.0429658368404,2.6062661364614,1.21079900526674,0.368277635987565,3.16462387440884,1.69004229049553,1.70083439972035,0.628975936525128,0.561643155732475,0.901061357049038,0.803627933485401,0.570025487482497,0.79566670879636,1.82664153764634,3.51992488922645,1.09227722252426,1.77901850772711,1.28019066769952,2.40237592221607,3.4485146397269,1.98313461835459,2.86216126360609,8.53819453664173,2.34894875748376,1.14681968437569,2.64342657158052,2.80254281490768,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,0,0,0,0.945348171640679,2.4390233720882,2.72287835648691,0.851363990735132,12.3860398019464,8.52804218404188,0,0.174129737299267,1.46253756570752,0,0,0,5.36658499890104,3.4409383804245,3.12426451446835,2.82653970962005,7.97048928798821,2.75118041940067,5.22487416342026,7.23566925674121,8.53839030448104,7.02913286805807,13.696196781711,9.12326526862215,10.4946684745713,3.30896772311282,5.67099363517232,2.76829157680647,2.02076435363553,2.0270066486998,1.53316637465883,1.89853131913626,4.21364011039937,0,0,9.59406914713576,0,0.886413581652058,1.05927344650575,0.286836620748814,0.709336764396714,1.68203280042692,3.20246987189115,3.94668077467456,0.311211035399766,2.96363478553314,1.9615428373615,4.69208025699287,1.15235184896,1.17160715916898,0,1.1409436430889,0,0.117434498643765,0,0.280901613404497,1.02077085627447,1.59684612505298,1.13658359293342,0,0,0,0.718618141816238,0.168336113954066,1.00094815897571,0.277064115484183,0.438977620880838,0,0,1.92834711372036,0.717558542755448,0.427114777637135,0,0.300091096084402,0.103052529238439,0.257640540045629,0.37223371266318,0.168776332241266,0,0,0.184099797284599,1.13152239773168,0.355009592516614,0.10075209822764,0.67824236924195,11.7889120429611,9.27336810008838,10.0381608386151,0.243947412259191,0.132529768321485,0.232387885739037,0.207322110030741,0,0.36497735907583,0,0,0,0.464367928031979,0,6.03364680203204,5.73187946265546,6.02527574708705,6.06616850028167,8.27941887551143,6.64357733511071,7.41572194880904,8.43752300038988,9.23393176671337,4.42893272774789,4.20725321410337,2.057870056657,2.94017422771084,0,0,0,0,0.245976877086227,2.05881372358231,14.5967879593472,4.49607013030478,3.51851403440708,2.77765335475589,0.977424915930974,0,8.6598805215164,0.579652024875384,4.46153038096122,3.46479474626577,1.38895653772983,1.90254152234598,2.37061319387782,0.858486162094873,0.984868024349589,0.234004265139238,1.18904929830983,0.93733833986777,9.07103492273841,6.66342957039216,2.7763142037883,3.48760726216754,6.13412286664338,0.985326475791887,4.4024217006613,8.9151089682532,10.8089965062721,14.6441222774601,0.063497894292169,0,0,0,0,0,0,2.5790149399433,0,0.95339771567235,2.97324946242889,0,0,2.92531928243358,3.12022310734098,0.257207374262142,2.83698264046557,1.5985330740966,0.285955987316295,0,0,0,0,0,3.01439377059586,7.84380112740265,8.19778527692868,0,0,12.6500363689819,0,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0,0.128343036279748,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0,1.8403723757871,2.50085260529839,2.98391526069709,0.207970861530807,0,0,0.234282829985426,0.300946099727719,2.27407504055985,0,0,0.368738337083406,0.173767228936166,2.34961388955289,1.37257369524342,0,0,0.106727557803444,0.606255142892519,3.32870879020994,2.72151263996712,0.496215615637554,0.306923946576125,0,0.128139149255701,0,0.160853921143607,1.48418066444991,0,0.355123450626254,0,3.11552657510173,0,0.483437798366489,8.82228469334453,3.13075362382048,1.37777337797528,1.45672934405374,4.19598127870157,6.31679458070376,3.23464415838542,11.7652465376528,2.92278449306521,2.32213583564327,14.7853399292166,7.48412303216669,1.94324324491925,9.25363516141736,6.23176806350862,6.02027728625824,5.60727800699084,5.81753206250107,4.47749509444357,0,0,1.79515087581472,3.60816110269676,0,0.515205058238611,0.183138929636687,0,10.9110452219273,6.50060246036521,0,0.096670718292122,0,0,0.275673144969061,0.107420244868274,0.145016693914229,0.1704532548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| |||
|short_description=p4@JUP | |||
}} |
Latest revision as of 07:18, 20 September 2015
Short description: | p4@JUP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_JUP_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000449889_5end |
EntrezGene: | JUP |
HGNC: | 6207 |
UniProt: | C9JKY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.19e-19 | 253 |
meso-epithelial cell | 6.59e-15 | 45 |
endothelial cell | 4.52e-14 | 36 |
endothelial cell of vascular tree | 5.50e-12 | 24 |
mesodermal cell | 5.63e-12 | 121 |
lining cell | 1.72e-10 | 58 |
barrier cell | 1.72e-10 | 58 |
epithelial cell of nephron | 4.39e-10 | 15 |
blood vessel endothelial cell | 1.99e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.99e-09 | 18 |
embryonic cell | 2.90e-09 | 250 |
kidney cell | 5.13e-09 | 17 |
kidney epithelial cell | 5.13e-09 | 17 |
kidney cortical cell | 8.80e-09 | 12 |
renal cortical epithelial cell | 8.80e-09 | 12 |
squamous epithelial cell | 3.36e-08 | 63 |
vascular associated smooth muscle cell | 9.75e-08 | 32 |
kidney tubule cell | 7.15e-07 | 10 |
nephron tubule epithelial cell | 7.15e-07 | 10 |