FFCP PHASE1:Hg19::chr17:46703491..46703497,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3219 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5120 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=116bp_to_AK056123_5end | |||
|cluster_id=chr17:46703491..46703497,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_12_at_HOXB9_5end | |||
|id=chr17:46703491..46703497,- | |||
|ontology_enrichment_celltype=CL:0000066!2.66e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000306;1.57e-09;4!CL:0002222;1.57e-09;4!CL:0002224;1.57e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.57e-09,4;CL:0002222,1.57e-09,4;CL:0002224,1.57e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!6.97e-20!239;DOID:162!1.24e-18!235;DOID:0050687!1.09e-16!143;DOID:305!8.93e-11!106;DOID:1749!9.94e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:4468;1.07e-17;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,9.07e-18,2 | |||
|ontology_enrichment_uberon=UBERON:0002113!2.65e-11!27;UBERON:0003918!2.65e-11!27;UBERON:0005095!2.65e-11!27;UBERON:0007687!2.65e-11!27;UBERON:0000489!1.58e-10!32;UBERON:0006554!5.75e-08!44;UBERON:0001008!1.04e-07!45;UBERON:0006947!1.19e-07!3;UBERON:0004054!1.19e-07!3;UBERON:0005172!1.66e-07!55;UBERON:0005173!1.66e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.68e-30;10!UBERON:0000178;1.20e-20;15!UBERON:0000179;1.20e-20;15!UBERON:0000463;1.20e-20;15!UBERON:0000478;3.20e-13;24!UBERON:0002390;3.38e-10;32!UBERON:0010077;1.57e-09;4!UBERON:0005389;1.57e-09;4!UBERON:0000484;1.57e-09;4!UBERON:0000965;1.57e-09;4!UBERON:0001803;1.57e-09;4!UBERON:0000922;9.34e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.68e-30,10;UBERON:0000358,1.68e-30,10;UBERON:0000307,1.68e-30,10;UBERON:0000091,1.68e-30,10;UBERON:0000087,1.68e-30,10;UBERON:0007010,1.68e-30,10;UBERON:0007806,1.68e-30,10;UBERON:0008780,1.68e-30,10;UBERON:0005728,1.68e-30,10;UBERON:0000178,1.20e-20,15;UBERON:0000179,1.20e-20,15;UBERON:0000463,1.20e-20,15;UBERON:0000478,3.20e-13,24;UBERON:0010077,1.57e-09,4;UBERON:0005389,1.57e-09,4;UBERON:0000484,1.57e-09,4;UBERON:0002546,1.57e-09,4;UBERON:0000965,1.57e-09,4;UBERON:0001803,1.57e-09,4;UBERON:0003073,1.57e-09,4;UBERON:0005426,1.57e-09,4 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.66944122552934,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.316654886678627,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.32681539055697,0,0,0.341826167541004,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0.225595660617181,0.19606253431774,0.167821586975843,0.189753732724185,0,1.47698645169619,0,0,0,0,0,0,2.07564790076435,3.70691816839509,2.8193926366473,0,0,0,0,0,0.728341138602278,0.394584402849391,0,0,0,0.450970258243478,0.311064574191741,0,0,0,0,0,0.277349346026277,0,0,0.0870592065804026,0.17472666824203,0.171986032471617,0,0,0,0,0,0,0.411125773940253,0,0,0,0.0801588202515337,0,0,0,0.114536596165916,0.343189995723929,0.288109595976299,0.372757606696298,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.367182116944987,0.422401346077626,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0.113312091520126,0,0,0,0,0.342173675768659,0,0,0,0,0,0.395223263795889,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0.521988583930423,0.226705925512272,0.463044948647668,0,0.179088841081487,0,0.219284049578707,0.176689145945881,0,0,1.02496607435179,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.231051332300676,0,0,0,0,0.20170506870352,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0.431855182437243,0.47775168788705,0,0,0.116241425368125,0.173858272302579,0,0,0,0,0,0.354996002191696,0.340853619036631,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0.33883824611688,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0.352894871715692,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0.269475606319761,0,0,0,0,0,0 | |||
|short_description=p12@HOXB9 | |||
}} |
Latest revision as of 07:37, 25 September 2015
Short description: | p12@HOXB9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_HOXB9_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 116bp_to_AK056123_5end |
EntrezGene: | HOXB9 |
HGNC: | 5120 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.57e-09 | 4 |
vertebrate lens cell | 1.57e-09 | 4 |
lens epithelial cell | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.68e-30 | 10 |
blastocyst | 1.68e-30 | 10 |
blastula | 1.68e-30 | 10 |
bilaminar disc | 1.68e-30 | 10 |
inner cell mass | 1.68e-30 | 10 |
cleaving embryo | 1.68e-30 | 10 |
connecting stalk | 1.68e-30 | 10 |
inner cell mass derived epiblast | 1.68e-30 | 10 |
extraembryonic mesoderm | 1.68e-30 | 10 |
blood | 1.20e-20 | 15 |
haemolymphatic fluid | 1.20e-20 | 15 |
organism substance | 1.20e-20 | 15 |
extraembryonic structure | 3.20e-13 | 24 |
cuboidal epithelium | 1.57e-09 | 4 |
transparent eye structure | 1.57e-09 | 4 |
simple cuboidal epithelium | 1.57e-09 | 4 |
cranial placode | 1.57e-09 | 4 |
lens of camera-type eye | 1.57e-09 | 4 |
epithelium of lens | 1.57e-09 | 4 |
lens placode | 1.57e-09 | 4 |
lens vesicle | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 9.07e-18 | 2 |