FFCP PHASE1:Hg19::chr17:48273866..48273902,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1277 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2197 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=53bp_to_ENST00000485870_5end | |||
|cluster_id=chr17:48273866..48273902,- | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_51_at_COL1A1_5end | |||
|id=chr17:48273866..48273902,- | |||
|ontology_enrichment_celltype=CL:0000055!1.19e-37!180;CL:0000057!1.14e-20!75;CL:0000183!2.56e-18!59;CL:0000680!8.55e-18!57;CL:0000056!8.55e-18!57;CL:0000355!8.55e-18!57;CL:0000187!8.61e-17!54;CL:0000393!2.89e-14!60;CL:0000211!2.89e-14!60;CL:0000192!4.53e-13!42;CL:0000514!4.53e-13!42;CL:0000048!8.88e-12!430;CL:0000723!6.20e-11!436;CL:0000034!3.86e-10!444;CL:0000359!1.82e-08!32;CL:0000499!2.41e-08!27;CL:0002371!6.27e-08!591;CL:0002620!1.44e-07!23;CL:0000327!1.78e-07!14;CL:0000144!4.41e-07!625;CL:0000222!5.80e-07!119;CL:0002334!6.38e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000134;5.16e-08;55!CL:0002334;8.30e-08;12!CL:0002570;1.02e-07;8!CL:0000057;1.22e-07;73!CL:0000499;2.12e-07;28!CL:0000723;7.39e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.09e-19,76;CL:0000048,1.06e-13,427;CL:0000723,4.47e-13,433;CL:0000034,2.83e-12,441;CL:0002320,1.70e-09,361;CL:0000134,9.83e-09,354;CL:0002570,9.52e-08,8;CL:0002334,9.57e-08,12;CL:0000499,1.41e-07,28;CL:0000219,7.63e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.93e-19!83;UBERON:0002329!1.93e-19!83;UBERON:0003077!1.93e-19!83;UBERON:0003059!1.93e-19!83;UBERON:0007282!1.93e-19!83;UBERON:0009618!1.93e-19!83;UBERON:0007285!1.93e-19!83;UBERON:0001134!4.76e-18!61;UBERON:0002036!4.76e-18!61;UBERON:0003082!4.76e-18!61;UBERON:0004290!6.62e-17!70;UBERON:0002385!6.91e-17!63;UBERON:0001015!6.91e-17!63;UBERON:0000383!6.91e-17!63;UBERON:0000486!1.18e-14!82;UBERON:0005256!3.99e-13!143;UBERON:0002100!7.51e-10!216;UBERON:0000475!2.80e-08!365;UBERON:0004872!1.77e-07!84;UBERON:0001013!2.57e-07!14;UBERON:0000490!3.86e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.23e-09;9!UBERON:0000042;1.23e-09;9!UBERON:0003688;4.11e-09;6!UBERON:0002358;4.11e-09;6!UBERON:0003684;4.11e-09;6!UBERON:0001178;4.11e-09;6!UBERON:0002384;2.12e-08;198!UBERON:0003104;7.38e-07;7!UBERON:0009142;7.38e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.10e-10,371;UBERON:0003688,5.16e-09,6;UBERON:0002358,5.16e-09,6;UBERON:0003684,5.16e-09,6;UBERON:0001178,5.16e-09,6;UBERON:0001134,2.02e-07,62;UBERON:0002036,2.02e-07,62;UBERON:0003082,2.02e-07,62;UBERON:0002385,5.59e-07,64;UBERON:0001015,5.59e-07,64;UBERON:0000383,5.59e-07,64 | |||
|phase1_expression=2.36181893051724,5.78071414505655,4.36958652697511,7.00513088471913,10.7270662662549,6.97870819280295,0,0.631719873426831,0.522371256399677,0,0,0.436882744260345,2.90143676051299,0.618831764800233,0.994192127183747,0.672325146451775,0.602694528023977,0,0,0.61560529038394,2.24400760368678,0.626909442956176,0.572471974262113,0.273748850145768,0.502170558379211,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.767175371061182,1.80719576192283,2.00535164254356,3.76600949298142,0.795285947051099,8.27279279514481,0.283604451492204,0.886917589850256,1.66886092816939,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9091585508596,2.15271869829786,1.19168262731897,7.45775213946916,1.77334191099179,1.12135520028461,0,5.42668606517752,1.8672662123986,1.0776853765575,0.653847612453835,1.66493170409425,2.88087962239999,0,0,0,0.298897361103602,0.23486899728753,0.161872944368132,0.140450806702248,0,0.368502951935304,0.826606249406124,5.94001428641027,10.1379441004208,0.910161361938026,0.718618141816238,0.168336113954066,0.625592599359821,0.277064115484183,3.5118209670467,4.29082914118628,8.11285518095623,0.567160915800105,1.79389635688862,2.77624605464138,4.66250182551036,4.80145753735044,1.33968288009971,1.54584324027377,2.79175284497385,3.03797398034279,2.04617710838517,1.26216887122057,2.20919756741518,1.2931684545505,5.68015348026583,0.604512589365842,0.169560592310488,0,0,0,0,0,0,0.207322110030741,0,0,0,1.92972281457866,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,2.8810180793198,4.41026134156626,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0.115930404975077,1.05667824812239,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0.4400297149257,1.68053230485111,3.57656445851882,3.381211010224,0.797814349754612,3.12022310734098,1.02882949704857,0,1.5985330740966,3.0025378668211,14.1081617401775,2.46972101034231,1.30294473717494,1.77695974371273,0,0.301439377059586,0,0.299918973546171,0,0,0,2.63587341040741,8.04033550838797,1.42636905040718,0.579125226670317,1.2328579353023,0.716243852959582,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.736148950314839,3.00102312635806,0.813795071099207,20.3811444300191,13.20374517099,11.6699787125112,4.68565659970853,1.50473049863859,2.27407504055985,1.03473071292505,1.99267679560631,2.02806085395873,0.868836144680828,3.32861967686659,3.43143423810856,0,0,0,0,3.32870879020994,5.44302527993425,4.96215615637554,3.83654933220156,16.5589455715513,7.43207065683066,2.04682899626681,11.2597744800525,1.48418066444991,0.154209693802656,2.13074070375753,0.821271560138091,0,1.27831416305955,0,0,0,1.83703117063371,1.63882051206045,3.2781103739856,0,0,0.784349769176855,0,0,0,0,0.431831832204279,0,0.812839312631559,2.00675909541941,0,0,0.447749509444357,0,0,0,0,0,0,1.00726411300178,0,0.574265537996172,0,1.6068392984416,0.48335359146061,0.154048617114644,0.921022048356777,1.24052915236078,0.859361958946189,2.32026710262766,0.852266274161009,4.00644160410318,0,0,0,0,0.929691098594572,2.83331112147576,0,0.924100740528266,0.532306030317022,0,0.18532421910392,0.429374660225974,0,1.89827654831236,5.52827562379092,1.27948895655667,0.855877976067841,1.27281299170375,1.56989728039846,0.899362287916574,3.84351841630477,4.00562167975334,0.404364963146632,3.17020642346017,0.842516912477962,0.48763373908959,0.731140468893853,1.05650146756755,1.09199929126389,5.09059555033366,3.39024349860728,2.75682671773062,1.32687795048244,0.438450885253763,1.15755106853338,2.62357900818653,0.811641507850816,1.239293992399,1.12678241012897,0.717056761020258,0.687743287091848,0.35667105148125,1.06428319221179,3.58882980006029,2.63435914367922,0.75894634753143,0.699869440489966,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0.276283915531148,0,0,0,4.3545542272653,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,0.227884111694002,0,0,0.108647371922008,0,1.00757352742049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83309043480088,0,0,0,0,6.42062117839031,0,0,0,0,0,2.41981432097328,0.61214552326098,0.252746318513952,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0.171986032471617,0,0,0.0821154570532092,0,0.176512253383001,4.29363407483012,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,1.71906176567983,0,2.51354161145029,0,0,0.199679000498991,0,0,0.335917362433631,10.0883967391873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0.714695326373367,0,0.25426853765475,1.08599920350743,0,0.653174720218818,0,0,2.3854323049959,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196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| |||
|short_description=p51@COL1A1 | |||
}} |
Latest revision as of 01:09, 16 September 2015
Short description: | p51@COL1A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_51_at_COL1A1_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | 53bp_to_ENST00000485870_5end |
EntrezGene: | COL1A1 |
HGNC: | 2197 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.09e-19 | 76 |
multi fate stem cell | 1.06e-13 | 427 |
somatic stem cell | 4.47e-13 | 433 |
stem cell | 2.83e-12 | 441 |
connective tissue cell | 1.70e-09 | 361 |
mesenchymal cell | 9.83e-09 | 354 |
mesenchymal stem cell of adipose | 9.52e-08 | 8 |
preadipocyte | 9.57e-08 | 12 |
stromal cell | 1.41e-07 | 28 |
motile cell | 7.63e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.10e-10 | 371 |
omentum | 5.16e-09 | 6 |
peritoneum | 5.16e-09 | 6 |
abdominal cavity | 5.16e-09 | 6 |
visceral peritoneum | 5.16e-09 | 6 |
skeletal muscle tissue | 2.02e-07 | 62 |
striated muscle tissue | 2.02e-07 | 62 |
myotome | 2.02e-07 | 62 |
muscle tissue | 5.59e-07 | 64 |
musculature | 5.59e-07 | 64 |
musculature of body | 5.59e-07 | 64 |