FFCP PHASE1:Hg19::chr17:48437950..48437958,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:48437950..48437958,+ | |||
|description=CAGE_peak_at_chr17:48437950..48437958,+ | |||
|id=chr17:48437950..48437958,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000244;5.24e-17;4!CL:0000731;5.24e-17;4!CL:0000511;1.70e-08;1!CL:0002625;1.70e-08;1!CL:0002557;1.70e-08;1!CL:0000216;1.70e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,6.21e-17,4;CL:0000731,6.21e-17,4;CL:0000511,8.78e-09,1;CL:0002625,8.78e-09,1;CL:0000216,8.78e-09,1;CL:0002557,2.29e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!8.54e-09!239;DOID:162!9.76e-09!235;DOID:0050687!4.77e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.02e-13;5!UBERON:0005910;1.61e-11;6!UBERON:0001136;1.70e-08;1!UBERON:0001343;1.70e-08;1!UBERON:0007195;1.70e-08;1!UBERON:0004910;1.70e-08;1!UBERON:0004813;1.70e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.17e-13,5;UBERON:0005910,1.80e-11,6;UBERON:0001136,8.78e-09,1;UBERON:0001343,8.78e-09,1;UBERON:0004910,8.78e-09,1;UBERON:0005154,8.78e-09,1;UBERON:0005295,8.78e-09,1;UBERON:0004813,8.78e-09,1;UBERON:0005297,8.78e-09,1;UBERON:0005294,8.78e-09,1;UBERON:0010141,8.78e-09,1;UBERON:0005891,8.78e-09,1;UBERON:0007195,2.84e-08,1 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0,0.491467873003018,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0.85870796139317,0,0.125542639594803,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.309868802321207,0.142169232487422,0,0.553995408531877,0,0.217010870715852,0.671746422719773,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502497330513487,0,0,0,0,0,0,0.212604299965044,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.222820913770347,0,0,0,0.25618263945135,0.520237390239513,0.328875809207352,0,0.289803085735052,0,0.267540828089713,0,0.113309342697566,0,0.34362744548263,0.506039384039006,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0,0,0,0.383587685530591,0,0,0.289693037921647,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0.327447688744282,0.364295288292542,0.370784442784429,0.324547393654683,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0.267899184852239,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0.496971951695318,0.379891534993739,0.264818361626438,0.286836620748814,0.354668382198357,0.560677600142307,0,0.49333509683432,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0.298897361103602,0,0,0,0.408308342509787,0.368502951935304,0.206651562351531,0,0.494533858557114,0,0,1.0100166837244,0.375355559615893,0,0.438977620880838,0,0.300476117813194,1.13432183160021,0,0,0.423863802319124,0,0,0,0,0.843881661206331,0,0,0.0920498986422993,0,0,0,0.508681776931463,0.193260853163297,0.272746120590835,0.860413786167011,0.121973706129595,0,0.232387885739037,0.10366105501537,0.504641701751257,0,0,0.643240938192885,0,0.464367928031979,0,0.709840800239063,0.337169380156203,0.723033089650446,0.882351781859152,0,0.237270619111097,0.539325232640658,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0.245976877086227,0.171567810298526,0.219500570817251,0,0.100528972411631,0.277765335475589,0.325808305310325,0,0,0,0,0,0,0.190254152234598,0,0,0,0.468008530278475,0.148631162288728,0,0.335964256397719,0.283550194484773,0.268675568108545,0,0,0,0.088048434013226,0,0.144119953416961,0,0.571481048629521,0,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0,0,0.1466765716419,0.517086863031111,0,0.845302752556,0,1.04007436911366,0.257207374262142,0,0.266422179016099,0.285955987316295,0.542621605391443,0,0,1.42156779497018,0,0.301439377059586,0,0.99972991182057,0,0,0,0.239624855491583,0,0,0.868687840005475,0.410952645100767,0.358121926479791,0.224170287987055,0.394061520403854,0.431255149719035,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.713715955188647,0.157702415033935,0.117141414992713,0,2.27407504055985,0,0,0,0.868836144680828,0,0,0,0.215714200818617,0.106727557803444,0.303127571446259,0,0.30239029332968,0.248107807818777,0.460385919864187,0,0.384417447767103,0,0,0,0.462629081407967,0.355123450626254,0.739144404124282,0,0,0.362578348774867,0.200506470303285,0.0920809889358963,0.574072240823034,0,0.131124414959424,0,0.308061348417659,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0.447749509444357,0,0,0.256450125116389,0,0,0.103041011647722,0.27470839445503,0.330037999682352,1.14853107599234,0,1.6068392984416,0.290012154876366,0.154048617114644,0.15350367472613,0,0.751941714077915,0.145016693914229,0.170453254832202,0,0.330569830721956,0.576570202095319,0,0.10115778085555,0,0,0.6970372701606,0.308033580176089,1.06461206063404,0,0.18532421910392,0,1.116475108079,0.316379424718726,0.190630193923825,0,0,0,0,0.539617372749944,0,0.706874414074119,0.808729926293264,0,0,0,0.974853958525138,0,0,0.848432591722276,0,0,1.32687795048244,0.438450885253763,0,1.31178950409327,0,0.6196469961995,0.563391205064483,0.430234056612155,0.491245205065606,0,0.354761064070598,0.211107635297664,0,0,0,0.769776901804097,0,0,0.0941438007767792,1.29151611801369,0,2.21715076768338,1.1486170010348,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0.185803175125719,0.28853842595289,0.142283686696828,0,0,0.191505370132367,0,0.649243880549111,0.561594356226918,0.228234679033192,0.156679895773023,0,0.169291777801603,0,0,0.425846237690326,0.687010689511529,0,0.223676107892416,0,0,0,0,0.540911356951966,0,0,0,0,0.121360521749513,1.11443384277478,0.568272293612826,0.71623345421307,0,0.307160702099232,0,0.422008249231538,0.222617410045812,0.16480387422676,0.211125408127993,0,0.276283915531148,0,0.409074730008619,0.492339221844278,0.311039587661807,0.0898683511473268,0.537063524026827,0,0.197286811273867,0,1.11136990144637,0,0.0927680981618513,0,0.260427761085233,0.262379999988587,0,0.341380344856499,0.254253650292766,1.18193840883968,0.344743373241465,2.62444152044929,0,0,0.120596438625408,0,0,0,0.438770794307945,0.435753854075961,0.278847488557207,0.153900517007594,0.113942055847001,0.922255617552241,0.0897576444097721,0.6518842315320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| |||
|short_description=p@chr17:48437950..48437958,+ | |||
}} |
Latest revision as of 18:41, 25 July 2015
Short description: | p@chr17:48437950..48437958, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48437950..48437958, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 6.21e-17 | 4 |
urothelial cell | 6.21e-17 | 4 |
androgen binding protein secreting cell | 8.78e-09 | 1 |
seminiferous tubule epithelial cell | 8.78e-09 | 1 |
Sertoli cell | 8.78e-09 | 1 |
fibroblast of pulmonary artery | 2.29e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.17e-13 | 5 |
transitional epithelium | 1.80e-11 | 6 |
mesothelium | 8.78e-09 | 1 |
seminiferous tubule of testis | 8.78e-09 | 1 |
epithelium of male gonad | 8.78e-09 | 1 |
epithelial cord | 8.78e-09 | 1 |
sex cord | 8.78e-09 | 1 |
seminiferous tubule epithelium | 8.78e-09 | 1 |
testis sex cord | 8.78e-09 | 1 |
genital ridge | 8.78e-09 | 1 |
primitive sex cord of indifferent gonad | 8.78e-09 | 1 |
coelomic epithelium | 8.78e-09 | 1 |
stroma of bone marrow | 2.84e-08 | 1 |