FFCP PHASE1:Hg19::chr17:74864476..74864592,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=146664 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24140 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000374998_5end | |||
|cluster_id=chr17:74864476..74864592,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_MGAT5B_5end | |||
|id=chr17:74864476..74864592,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.52e-13!254;CL:0000133!1.40e-11!59;CL:0000221!2.92e-10!71;CL:0000333!5.48e-10!41;CL:0002319!1.90e-09!25;CL:0000148!5.73e-07!10;CL:0000541!5.73e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.21e-11;25!CL:0000148;1.78e-09;10!CL:0000147;7.25e-07;14!CL:0000095;9.55e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,8.70e-14,59;CL:0000333,1.34e-12,41;CL:0002319,2.01e-11,25;CL:0000221,3.47e-11,72;CL:0000148,1.82e-09,10;CL:0000541,1.82e-09,10;CL:0000066,5.20e-08,253;CL:0000147,8.23e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.10e-10;82!UBERON:0008947;1.15e-08;29!UBERON:0006238;1.70e-08;10!CL:0000133;1.43e-07;59 | |||
|ontology_enrichment_disease=DOID:0050687!4.34e-17!143;DOID:305!3.77e-13!106;DOID:162!1.70e-10!235;DOID:14566!1.19e-09!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.70e-16,143;DOID:305,2.84e-11,106;DOID:162,3.05e-11,235;DOID:14566,1.84e-10,239 | |||
|ontology_enrichment_uberon=UBERON:0001017!9.43e-36!82;UBERON:0005743!1.86e-35!86;UBERON:0000073!5.39e-35!94;UBERON:0001016!5.39e-35!94;UBERON:0000955!9.95e-30!69;UBERON:0006238!9.95e-30!69;UBERON:0001049!1.88e-27!57;UBERON:0005068!1.88e-27!57;UBERON:0006241!1.88e-27!57;UBERON:0007135!1.88e-27!57;UBERON:0004121!4.70e-25!169;UBERON:0000924!1.13e-24!173;UBERON:0006601!1.13e-24!173;UBERON:0003075!1.27e-24!86;UBERON:0007284!1.27e-24!86;UBERON:0002616!6.89e-24!59;UBERON:0002346!9.37e-24!90;UBERON:0002780!3.98e-22!41;UBERON:0001890!3.98e-22!41;UBERON:0006240!3.98e-22!41;UBERON:0000033!4.95e-22!123;UBERON:0003080!5.17e-21!42;UBERON:0001869!1.52e-20!32;UBERON:0001893!2.43e-20!34;UBERON:0000153!2.63e-20!129;UBERON:0007811!2.63e-20!129;UBERON:0002020!6.40e-20!34;UBERON:0003528!6.40e-20!34;UBERON:0002791!1.29e-19!33;UBERON:0003056!5.01e-19!61;UBERON:0000956!3.16e-16!25;UBERON:0000203!3.16e-16!25;UBERON:0002619!3.66e-15!22;UBERON:0001950!4.08e-14!20;UBERON:0000064!9.14e-12!219;UBERON:0000475!6.80e-11!365;UBERON:0000025!2.85e-10!194;UBERON:0000477!9.54e-10!286;UBERON:0000481!2.96e-08!347;UBERON:0004111!3.05e-08!241;UBERON:0000483!1.04e-07!309;UBERON:0000119!1.23e-07!312;UBERON:0003076!1.33e-07!15;UBERON:0003057!1.33e-07!15;UBERON:0007023!2.50e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;7.15e-27;32!UBERON:0001893;9.23e-26;34!UBERON:0003528;5.32e-25;34!UBERON:0002020;5.32e-25;34!UBERON:0002791;5.58e-25;32!UBERON:0000956;2.03e-23;25!UBERON:0000203;2.03e-23;25!UBERON:0002780;4.30e-22;41!UBERON:0001890;4.30e-22;41!UBERON:0002619;5.35e-22;22!UBERON:0000073;5.03e-21;53!UBERON:0002616;5.03e-21;53!UBERON:0001950;1.77e-20;20!UBERON:0001017;2.57e-18;75!UBERON:0000955;3.49e-18;68!UBERON:0001016;1.10e-16;83!UBERON:0001737;4.45e-08;9!UBERON:0001557;4.45e-08;9!UBERON:0000200;9.19e-08;6!UBERON:0004733;1.22e-07;12!UBERON:0002028;1.22e-07;12!UBERON:0002420;1.83e-07;9!UBERON:0007245;1.83e-07;9!UBERON:0010009;1.83e-07;9!UBERON:0010011;1.83e-07;9!UBERON:0000454;1.83e-07;9!UBERON:0004732;8.26e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.48e-47,81;UBERON:0001016,1.66e-46,89;UBERON:0000955,7.96e-40,68;UBERON:0006238,7.96e-40,68;UBERON:0001049,2.77e-39,56;UBERON:0005068,2.77e-39,56;UBERON:0006241,2.77e-39,56;UBERON:0007135,2.77e-39,56;UBERON:0000073,2.21e-37,53;UBERON:0002616,2.21e-37,53;UBERON:0002780,7.28e-31,41;UBERON:0001890,7.28e-31,41;UBERON:0003080,7.28e-31,41;UBERON:0006240,7.28e-31,41;UBERON:0001869,7.25e-30,32;UBERON:0001893,3.44e-29,34;UBERON:0003528,1.43e-28,34;UBERON:0002020,1.43e-28,34;UBERON:0002791,1.70e-27,32;UBERON:0003075,1.88e-26,82;UBERON:0007284,1.88e-26,82;UBERON:0002346,3.33e-24,86;UBERON:0011216,1.21e-23,223;UBERON:0000956,1.55e-23,25;UBERON:0000203,1.55e-23,25;UBERON:0010371,1.06e-22,104;UBERON:0004121,4.45e-22,171;UBERON:0000924,4.45e-22,171;UBERON:0006601,4.45e-22,171;UBERON:0003056,4.93e-22,61;UBERON:0002619,5.43e-22,22;UBERON:0001950,1.84e-20,20;UBERON:0010314,6.60e-16,132;UBERON:0000025,1.20e-11,192;UBERON:0003076,1.71e-09,15;UBERON:0003057,1.71e-09,15;UBERON:0001737,4.65e-08,9;UBERON:0007023,5.40e-08,114;UBERON:0000200,9.27e-08,6;UBERON:0004733,9.62e-08,12;UBERON:0002028,9.62e-08,12;UBERON:0007277,9.62e-08,12;UBERON:0002420,1.87e-07,9;UBERON:0007245,1.87e-07,9;UBERON:0010009,1.87e-07,9;UBERON:0010011,1.87e-07,9;UBERON:0000454,1.87e-07,9;UBERON:0004111,4.66e-07,240;UBERON:0004732,6.69e-07,13 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,1.09220686065086,1.84636884759917,0,0,0.672325146451775,2.41077811209591,1.46062018077475,2.43966399395253,5.0479633811483,4.08001382488506,0.626909442956176,1.71741592278634,6.43309797842556,2.63639543149086,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,1.32171328579026,0,0,0.393419540227666,0,0.411202997999018,0,0,0,1.94826728407911,0,0,0,0,0.128091319725675,0,0.328875809207352,0.829050053357545,0.579606171470105,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0.361439152384566,0,0.144846518960824,0.795285947051099,0,0.850813354476611,1.10864698731282,0.702678285545008,6.35248516163906,0.364295288292542,0,0,0,0,0,0,0,0.596287222100115,0,1.38856200643038,0.56530794192401,0.419499436209906,0.550236083880135,0.208994966536811,0.516833518338658,0.35576626268671,0.33472061276467,0.805658634218294,0,0.976248230192678,0,3.24056779152704,0.357198913136319,0.898117490504679,0.112611480483322,0,2.84779697870439,3.48083313467774,0,0,0.436094052142534,0,0,0.264818361626438,0,0,0.560677600142307,1.06748995729705,0.24666754841716,0.311211035399766,0.67355336034844,1.47115712802113,0.151357427644931,0,0.70296429550139,0,0.570471821544449,0,0.23486899728753,0,0.140450806702248,0.204154171254893,0.491337269247072,0,0,0,0.910161361938026,0,1.17835279767846,0.250237039743928,0.277064115484183,0,0.30648779579902,0,0.567160915800105,1.61450672119976,1.06778694409284,0.211931901159562,0.600182192168805,0.206105058476878,0.257640540045629,0.37223371266318,0.168776332241266,0,1.00973509697646,0.368199594569197,0.161646056818812,2.13005755509969,0.906768884048762,0.67824236924195,0.773043412653187,0.545492241181669,0.286804595389004,1.70763188581434,3.04818467139416,2.67246068599892,2.38420426535352,2.27088765788066,1.45990943630332,0,1.92972281457866,6.90674606762403,0,0,4.25904480143438,6.06904884281166,6.02527574708705,5.73528658208448,5.44698610231015,6.64357733511071,5.52808363456674,4.70931516300831,6.54070166808864,0.738155454624648,1.40241773803446,0.8231480226628,0,0,0,0.590789906681404,0,0.860919069801795,0.686271241194102,0.768251997860379,3.37205259772859,0.201057944823262,0.370353780634118,0.651616610620649,0,0,1.39116485970092,0.234817388471643,0.144366447761074,0,0.570762456703795,5.53143078571493,0.858486162094873,0,0,0,1.87467667973554,2.18376766658517,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0.12624243342638,20.3828240677863,15.6615254478894,22.2713149699089,13.6857956818164,12.6477816025088,16.5188681814155,12.862189468376,0.336393253036082,0,0.5867062865676,0.646358578788889,0,0,0,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0.599837947092342,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0.128343036279748,4.8277978602268,2.60279707715243,7.73288812777695,11.8936548387388,7.01732626818479,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0.234282829985426,0,2.27407504055985,0,1.32845119707087,1.65932251687533,0.260650843404249,0.391602314925481,1.02943027143257,0,0,0.106727557803444,5.15316871458641,0,1.81434175997808,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,1.32945394550784,0.802025881213139,0,0,0,0,0.902399225814824,0.0770153371044148,1.56869953835371,1.46139224653261,0.211103257785751,0,1.70093705276516,1.0795795805107,0,0.812839312631559,0,0,0,2.46262230194396,0,0.261435451024901,1.28225062558195,0,0.650756789328606,0.721287081534056,1.92295876118521,2.80532299729999,0,0,0,0.48335359146061,0,0,0.137836572484531,0.214840489736547,0.290033387828457,0.340906509664404,0.0890320356467374,0.165284915360978,0.960950336825531,0.638063562472921,0,0,0,0.6970372701606,0,0,0,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0.255897791311334,0,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0.281695602532241,1.14729081763241,0.88424136911809,0.7133421029625,0,0.422215270595328,0,0.75894634753143,0.349934720244983,0.0962221127255121,0,0,0.188287601553558,1.72202149068492,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,1.6023610669121,1.92495971052672,0.980160863924127,0,0.865615277858669,0,0.797131363644112,0,1.1490322207942,0.423347165447766,0,0,0.456469358066384,0,0,0,0,0,0.851692475380653,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,1.09224469574562,0,5.96685908293468,0.71623345421307,0,0,26.84198648969,18.8497017990087,3.33926115068718,0,0.211125408127993,0.597743964753209,0.276283915531148,0,13.8062721377909,0,0,1.61763032065188,2.86433879480975,0,0.197286811273867,0,0,32.9573133672374,24.3980098165669,13.9729658600836,2.3438498497671,0,0,0.455173793141999,2.03402920234213,4.01859059005492,6.20538071834636,0.291604613383254,5.20874984799877,21.2577932595321,13.386204687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| |||
|short_description=p1@MGAT5B | |||
}} |
Latest revision as of 17:28, 17 September 2015
Short description: | p1@MGAT5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MGAT5B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000374998_5end |
EntrezGene: | MGAT5B |
HGNC: | 24140 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 8.70e-14 | 59 |
migratory neural crest cell | 1.34e-12 | 41 |
neural cell | 2.01e-11 | 25 |
ectodermal cell | 3.47e-11 | 72 |
melanocyte | 1.82e-09 | 10 |
melanoblast | 1.82e-09 | 10 |
epithelial cell | 5.20e-08 | 253 |
pigment cell | 8.23e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.70e-16 | 143 |
carcinoma | 2.84e-11 | 106 |
cancer | 3.05e-11 | 235 |
disease of cellular proliferation | 1.84e-10 | 239 |