FFCP PHASE1:Hg19::chr17:7750261..7750276,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:7750261..7750276,+ | |||
|coexpression_cluster_id=C532 | |||
|description=CAGE_peak_at_chr17:7750261..7750276,+ | |||
|id=chr17:7750261..7750276,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.39e-36!42;CL:0000860!1.20e-32!45;CL:0000766!3.22e-27!76;CL:0000557!9.76e-24!71;CL:0000839!6.61e-23!70;CL:0002009!2.87e-22!65;CL:0002194!5.64e-22!63;CL:0000576!5.64e-22!63;CL:0000040!5.64e-22!63;CL:0000559!5.64e-22!63;CL:0000738!1.38e-20!140;CL:0002031!5.16e-18!124;CL:0002087!2.72e-17!119;CL:0000763!2.17e-15!112;CL:0000049!2.17e-15!112;CL:0000037!5.55e-14!172;CL:0000566!5.55e-14!172;CL:0002032!8.75e-14!165;CL:0000837!8.75e-14!165;CL:0000988!1.39e-13!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.17e-95;33!CL:0002057;1.17e-95;33!CL:0000473;4.05e-65;39!CL:0000234;4.05e-65;39!CL:0000576;7.14e-45;48!CL:0000766;4.81e-32;69!CL:0000763;3.28e-15;100!CL:0002087;2.18e-13;104!CL:0000775;2.47e-11;3!CL:0000738;5.74e-09;136!CL:0002591;1.53e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.72e-81,42;CL:0002057,2.72e-81,42;CL:0000473,1.13e-70,48;CL:0000234,1.13e-70,48;CL:0000766,1.22e-59,72;CL:0002194,8.42e-56,59;CL:0000576,8.42e-56,59;CL:0000040,8.42e-56,59;CL:0000559,8.42e-56,59;CL:0000839,1.31e-54,66;CL:0002009,7.00e-54,61;CL:0000557,9.46e-54,67;CL:0000763,1.23e-38,108;CL:0000049,1.23e-38,108;CL:0000738,6.49e-30,136;CL:0002031,1.67e-28,120;CL:0002087,4.98e-27,115;CL:0002032,1.15e-24,161;CL:0000837,1.15e-24,161;CL:0000037,1.79e-23,168;CL:0000988,4.47e-22,177;CL:0000775,2.54e-11,3;CL:0000134,6.32e-09,354;CL:0002320,1.15e-08,361;CL:0002591,1.91e-08,1;CL:0000219,9.35e-08,386;CL:0000048,1.76e-07,427;CL:0000723,2.59e-07,433;CL:0000034,4.26e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.71e-58;42!CL:0000049;2.48e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.41e-20!102;UBERON:0003061!5.41e-20!102;UBERON:0002371!1.54e-19!80;UBERON:0001474!3.65e-18!86;UBERON:0002193!1.26e-17!112;UBERON:0004765!3.03e-15!101;UBERON:0001434!3.03e-15!101;UBERON:0002405!7.12e-14!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.08e-47,76;UBERON:0001474,2.41e-43,82;UBERON:0004765,3.41e-39,90;UBERON:0002405,8.09e-38,93;UBERON:0002390,1.03e-35,98;UBERON:0003061,1.03e-35,98;UBERON:0001434,6.30e-35,100;UBERON:0002193,4.47e-32,108;UBERON:0002204,2.25e-21,167;UBERON:0003081,7.13e-17,203;UBERON:0000926,2.17e-09,315;UBERON:0004120,2.17e-09,315;UBERON:0006603,2.17e-09,315;UBERON:0002384,2.58e-08,371 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0.631719873426831,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0,0.393364276848904,0,0.154816123316076,0,0,1.10926203050036,0,0.142169232487422,0,0.553995408531877,0.802177789880567,0.434021741431704,0,0,0,0.436194716338694,0.755751887377619,0.727752183563449,0.929716147622738,1.23350366406548,1.54853185447552,2.8769239232215,1.5369642391746,1.18241114944293,3.10271112662957,1.93645405075148,1.35426486594342,1.12945403725563,2.18324920046277,0.898893937780338,4.89734227793444,1.28371610830437,5.75403413219137,0.329851300186716,0.398927315243264,0.426224750532694,5.80418477257168,2.26954089876456,7.4738669879469,3.01498398308092,2.60741459210101,1.3031330682307,2.42159801053347,2.20966581592539,2.21523671208619,0,0,0,0,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0,0,0.393419540227666,0,0.411202997999018,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,0.403213486449465,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0.364295288292542,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0.337169380156203,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,16.2578868505661,0,0.621984346622316,0,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0.128343036279748,0.254094624222463,0,0,0,0,4.49404214368309,11.966458368161,0.414415513436035,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0.195801157462741,0,0.413536052245775,0,0.320182673410333,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0.144269212976445,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0.520855522170466,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.176915129006678,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0.225980740780532,0.137041924646751,0,0,0,0,0.213452994739353,0,0.288180834308212,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0.146552233678082,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0.157265941855896,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0.135075169236789,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0.846774100381858,0.22910686854405,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0,0,0.397901550322736,0,0,0.219881033490858,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0,0,0.426467963801962,0,0,0.124149428591716,0.112131862580613,0.0636471582781649,0,0,0,0.0673520530145875,0,0.665320713092027,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr17:7750261..7750276,+ | |||
}} |
Latest revision as of 22:21, 25 July 2015
Short description: | p@chr17:7750261..7750276, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:7750261..7750276, + |
Coexpression cluster: | C532_Mast_CD14_Eosinophils_seminal_ductus_Neutrophils_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.72e-81 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.72e-81 | 42 |
defensive cell | 1.13e-70 | 48 |
phagocyte | 1.13e-70 | 48 |
myeloid leukocyte | 1.22e-59 | 72 |
monopoietic cell | 8.42e-56 | 59 |
monocyte | 8.42e-56 | 59 |
monoblast | 8.42e-56 | 59 |
promonocyte | 8.42e-56 | 59 |
myeloid lineage restricted progenitor cell | 1.31e-54 | 66 |
macrophage dendritic cell progenitor | 7.00e-54 | 61 |
granulocyte monocyte progenitor cell | 9.46e-54 | 67 |
myeloid cell | 1.23e-38 | 108 |
common myeloid progenitor | 1.23e-38 | 108 |
leukocyte | 6.49e-30 | 136 |
hematopoietic lineage restricted progenitor cell | 1.67e-28 | 120 |
nongranular leukocyte | 4.98e-27 | 115 |
hematopoietic oligopotent progenitor cell | 1.15e-24 | 161 |
hematopoietic multipotent progenitor cell | 1.15e-24 | 161 |
hematopoietic stem cell | 1.79e-23 | 168 |
hematopoietic cell | 4.47e-22 | 177 |
neutrophil | 2.54e-11 | 3 |
mesenchymal cell | 6.32e-09 | 354 |
connective tissue cell | 1.15e-08 | 361 |
smooth muscle cell of the pulmonary artery | 1.91e-08 | 1 |
motile cell | 9.35e-08 | 386 |
multi fate stem cell | 1.76e-07 | 427 |
somatic stem cell | 2.59e-07 | 433 |
stem cell | 4.26e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.08e-47 | 76 |
bone element | 2.41e-43 | 82 |
skeletal element | 3.41e-39 | 90 |
immune system | 8.09e-38 | 93 |
hematopoietic system | 1.03e-35 | 98 |
blood island | 1.03e-35 | 98 |
skeletal system | 6.30e-35 | 100 |
hemolymphoid system | 4.47e-32 | 108 |
musculoskeletal system | 2.25e-21 | 167 |
lateral plate mesoderm | 7.13e-17 | 203 |
mesoderm | 2.17e-09 | 315 |
mesoderm-derived structure | 2.17e-09 | 315 |
presumptive mesoderm | 2.17e-09 | 315 |
connective tissue | 2.58e-08 | 371 |