FFCP PHASE1:Hg19::chr17:79359195..79359212,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:79359195..79359212,- | |||
|coexpression_cluster_id=C327 | |||
|description=CAGE_peak_at_chr17:79359195..79359212,- | |||
|id=chr17:79359195..79359212,- | |||
|ontology_enrichment_celltype=CL:0000148!2.86e-22!10;CL:0000541!2.86e-22!10;CL:0000147!1.71e-15!14;CL:0002567!4.73e-12!3;CL:0000710!2.06e-10!20;CL:0000075!2.37e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.16e-20;10!CL:0000147;1.83e-14;14!CL:0002567;4.40e-14;3!CL:0000710;8.19e-10;20!CL:0000075;5.28e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.11e-20,10;CL:0000541,1.11e-20,10;CL:0000147,1.78e-14,14;CL:0002567,5.24e-14,3;CL:0000710,8.04e-10,20;CL:0000075,5.21e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.57e-17;82!UBERON:0006241;8.55e-13;3!UBERON:0003057;8.55e-13;3 | |||
|ontology_enrichment_disease=DOID:1909!1.72e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;8.02e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,8.75e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.26e-81!57;UBERON:0005068!1.26e-81!57;UBERON:0006241!1.26e-81!57;UBERON:0007135!1.26e-81!57;UBERON:0002616!4.71e-66!59;UBERON:0000955!2.13e-61!69;UBERON:0006238!2.13e-61!69;UBERON:0001017!9.15e-60!82;UBERON:0005743!1.18e-59!86;UBERON:0002780!2.63e-58!41;UBERON:0001890!2.63e-58!41;UBERON:0006240!2.63e-58!41;UBERON:0003080!8.91e-57!42;UBERON:0000073!2.91e-56!94;UBERON:0001016!2.91e-56!94;UBERON:0001893!6.34e-56!34;UBERON:0002020!8.51e-56!34;UBERON:0003528!8.51e-56!34;UBERON:0003075!4.15e-54!86;UBERON:0007284!4.15e-54!86;UBERON:0002791!3.83e-53!33;UBERON:0002346!2.69e-51!90;UBERON:0001869!1.26e-49!32;UBERON:0007023!2.26e-48!115;UBERON:0003056!5.29e-40!61;UBERON:0000033!8.06e-35!123;UBERON:0002619!1.10e-34!22;UBERON:0000153!8.94e-33!129;UBERON:0007811!8.94e-33!129;UBERON:0004121!1.16e-30!169;UBERON:0000956!3.22e-30!25;UBERON:0000203!3.22e-30!25;UBERON:0002308!3.33e-30!9;UBERON:0000125!3.33e-30!9;UBERON:0000924!1.01e-29!173;UBERON:0006601!1.01e-29!173;UBERON:0001950!4.27e-29!20;UBERON:0003076!6.30e-25!15;UBERON:0003057!6.30e-25!15;UBERON:0002420!3.23e-24!9;UBERON:0007245!3.23e-24!9;UBERON:0010009!3.23e-24!9;UBERON:0010011!3.23e-24!9;UBERON:0000454!3.23e-24!9;UBERON:0009663!6.04e-24!7;UBERON:0002298!2.89e-20!8;UBERON:0004732!1.47e-19!13;UBERON:0000025!1.10e-18!194;UBERON:0004733!1.44e-16!12;UBERON:0002028!1.44e-16!12;UBERON:0007277!1.44e-16!12;UBERON:0000200!2.44e-14!6;UBERON:0000369!5.86e-14!4;UBERON:0002435!5.86e-14!4;UBERON:0000204!5.86e-14!4;UBERON:0010082!5.86e-14!4;UBERON:0004111!3.26e-13!241;UBERON:0000349!1.50e-11!5;UBERON:0002771!1.72e-11!3;UBERON:0006331!2.36e-11!3;UBERON:0000477!2.81e-11!286;UBERON:0001872!2.97e-11!5;UBERON:0001871!3.37e-11!7;UBERON:0002240!4.74e-11!3;UBERON:0005383!6.03e-11!3;UBERON:0005382!6.03e-11!3;UBERON:0000988!6.46e-11!3;UBERON:0001896!9.41e-11!3;UBERON:0005290!9.41e-11!3;UBERON:0010096!9.41e-11!3;UBERON:0000483!1.48e-10!309;UBERON:0000064!1.68e-10!219;UBERON:0000119!2.32e-10!312;UBERON:0000475!3.67e-10!365;UBERON:0002680!4.88e-09!9;UBERON:0001895!4.88e-09!9;UBERON:0010092!4.88e-09!9;UBERON:0005162!8.90e-09!2;UBERON:0000122!8.90e-09!2;UBERON:0001897!1.72e-08!2;UBERON:0001875!2.39e-08!2;UBERON:0006514!2.39e-08!2;UBERON:0002148!5.79e-08!2;UBERON:0009662!5.79e-08!2;UBERON:0001954!6.43e-08!2;UBERON:0003022!6.43e-08!2;UBERON:0002421!6.43e-08!2;UBERON:0002600!6.43e-08!2;UBERON:0001873!7.14e-08!2;UBERON:0010122!7.14e-08!2;UBERON:0005174!8.66e-07!5;UBERON:0001137!8.66e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.66e-47;34!UBERON:0003528;2.99e-45;34!UBERON:0002020;2.99e-45;34!UBERON:0002791;5.64e-43;32!UBERON:0001869;1.04e-42;32!UBERON:0002780;4.48e-42;41!UBERON:0001890;4.48e-42;41!UBERON:0000073;1.90e-40;53!UBERON:0002616;1.90e-40;53!UBERON:0002619;1.41e-36;22!UBERON:0001950;7.41e-35;20!UBERON:0000956;5.94e-32;25!UBERON:0000203;5.94e-32;25!UBERON:0000125;4.05e-28;9!UBERON:0002308;4.05e-28;9!UBERON:0001017;5.29e-26;75!UBERON:0000955;3.41e-24;68!UBERON:0002298;2.52e-23;6!UBERON:0002420;4.43e-22;9!UBERON:0007245;4.43e-22;9!UBERON:0010009;4.43e-22;9!UBERON:0010011;4.43e-22;9!UBERON:0000454;4.43e-22;9!UBERON:0009663;6.27e-21;7!UBERON:0001016;1.38e-19;83!UBERON:0000200;6.61e-17;6!UBERON:0004732;2.30e-14;13!UBERON:0001872;3.35e-13;5!UBERON:0002240;8.55e-13;3!UBERON:0005174;8.55e-13;3!UBERON:0001137;8.55e-13;3!UBERON:0007023;9.64e-13;114!UBERON:0000988;1.54e-12;3!UBERON:0001896;1.54e-12;3!UBERON:0005290;1.54e-12;3!UBERON:0004733;2.20e-11;12!UBERON:0002028;2.20e-11;12!UBERON:0005162;4.76e-10;2!UBERON:0000122;4.76e-10;2!UBERON:0001871;7.25e-10;6!UBERON:0001897;9.95e-10;2!UBERON:0010225;9.95e-10;2!UBERON:0011216;1.03e-09;132!UBERON:0000369;1.21e-09;4!UBERON:0002435;1.21e-09;4!UBERON:0000204;1.21e-09;4!UBERON:0001875;1.56e-09;2!UBERON:0006514;1.56e-09;2!UBERON:0002771;2.87e-09;2!UBERON:0002148;5.22e-09;2!UBERON:0006331;5.22e-09;2!UBERON:0009662;5.22e-09;2!UBERON:0000349;3.11e-08;5!UBERON:0002021;1.47e-07;5!UBERON:0010314;2.23e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.07e-80,56;UBERON:0005068,4.07e-80,56;UBERON:0006241,4.07e-80,56;UBERON:0007135,4.07e-80,56;UBERON:0000073,2.72e-70,53;UBERON:0002616,2.72e-70,53;UBERON:0002780,3.50e-60,41;UBERON:0001890,3.50e-60,41;UBERON:0003080,3.50e-60,41;UBERON:0006240,3.50e-60,41;UBERON:0000955,5.47e-60,68;UBERON:0006238,5.47e-60,68;UBERON:0003075,1.89e-59,82;UBERON:0007284,1.89e-59,82;UBERON:0001017,2.00e-59,81;UBERON:0001893,1.48e-56,34;UBERON:0003528,2.04e-56,34;UBERON:0002020,2.04e-56,34;UBERON:0002346,2.47e-56,86;UBERON:0001016,3.33e-56,89;UBERON:0010371,3.54e-51,104;UBERON:0002791,9.15e-50,32;UBERON:0001869,2.04e-49,32;UBERON:0003056,1.52e-45,61;UBERON:0007023,9.57e-44,114;UBERON:0002619,2.15e-36,22;UBERON:0010314,2.95e-36,132;UBERON:0001950,1.16e-34,20;UBERON:0000956,8.63e-32,25;UBERON:0000203,8.63e-32,25;UBERON:0004121,4.32e-31,171;UBERON:0000924,4.32e-31,171;UBERON:0006601,4.32e-31,171;UBERON:0000125,1.72e-28,9;UBERON:0002308,1.72e-28,9;UBERON:0002298,2.24e-23,6;UBERON:0002420,2.84e-22,9;UBERON:0007245,2.84e-22,9;UBERON:0010009,2.84e-22,9;UBERON:0010011,2.84e-22,9;UBERON:0000454,2.84e-22,9;UBERON:0009663,3.70e-21,7;UBERON:0003076,4.76e-20,15;UBERON:0003057,4.76e-20,15;UBERON:0011216,4.57e-19,223;UBERON:0000025,5.12e-18,192;UBERON:0000200,8.54e-17,6;UBERON:0004732,2.11e-14,13;UBERON:0001872,3.94e-13,5;UBERON:0004111,7.44e-13,240;UBERON:0002240,8.06e-13,3;UBERON:0005174,8.06e-13,3;UBERON:0001137,8.06e-13,3;UBERON:0000988,1.16e-12,3;UBERON:0001896,1.82e-12,3;UBERON:0005290,1.82e-12,3;UBERON:0010096,1.82e-12,3;UBERON:0000483,7.62e-12,306;UBERON:0000119,1.20e-11,309;UBERON:0004733,2.08e-11,12;UBERON:0002028,2.08e-11,12;UBERON:0007277,2.08e-11,12;UBERON:0005162,4.00e-10,2;UBERON:0000122,4.00e-10,2;UBERON:0001871,6.93e-10,6;UBERON:0000369,8.44e-10,4;UBERON:0002435,8.44e-10,4;UBERON:0000204,8.44e-10,4;UBERON:0010082,8.44e-10,4;UBERON:0001897,8.75e-10,2;UBERON:0010225,8.75e-10,2;UBERON:0001875,1.29e-09,2;UBERON:0006514,1.29e-09,2;UBERON:0002771,2.43e-09,2;UBERON:0002148,3.68e-09,2;UBERON:0006331,3.68e-09,2;UBERON:0009662,3.68e-09,2;UBERON:0000349,2.89e-08,5;UBERON:0002021,1.71e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80987365753014,8.40374536228211,3.51652341630141,5.13217338068116,5.55268460597947,4.20480280981484,2.85826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.48610724001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81599647657131,1.39152147242777,0,0,0,0,0,0,0,0,0,0,0.885741385813839,3.97968247463846,0,0.221158519862449,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.93129970229958,0,2.10838001152805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.089256266544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,4.79168826121976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0.795229689809303,4.22230558945884,0,0,0,0,0,1.70098758642469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80996138906171,2.77688463659649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19647276823534,4.00610978260799,1.72022758707021,1.55300672151593,2.11127770000704,0,0,5.15606999641603,3.71104933608458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90342715918635,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79841830270087,0,1.91560630868582,1.02558182120378,0,1.10651603942749,4.52131807769183,5.71077681036618,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48582686160468,3.12431239445539,1.86018116851066,2.15613754659283,0,0,0,0,0,0,0,0,0,0,0,0,1.63127359144396,1.31545547125698,0,0,0,1.88538707899202,0,0,0,0,1.6439605160631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35570160537934,2.37637120261669,1.6906229103336,0,0,0.0644578879735772,0,0,0,0,0,0,4.15684791139209,0,2.24371917630019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48750831837634,7.65404169378025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr17:79359195..79359212,- | |||
}} |
Latest revision as of 22:40, 25 July 2015
Short description: | p@chr17:79359195..79359212, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:79359195..79359212, - |
Coexpression cluster: | C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.11e-20 | 10 |
melanoblast | 1.11e-20 | 10 |
pigment cell | 1.78e-14 | 14 |
light melanocyte | 5.24e-14 | 3 |
neurecto-epithelial cell | 8.04e-10 | 20 |
columnar/cuboidal epithelial cell | 5.21e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
melanoma | 8.75e-10 | 2 |